Click here to switch to the map view.

The map label for this gene is ascS [H]

Identifier: 145301464

GI number: 145301464

Start: 77943

End: 78209

Strand: Direct

Name: ascS [H]

Synonym: ASA_P5G081

Alternate gene names: 145301464

Gene position: 77943-78209 (Clockwise)

Preceding gene: 145301463

Following gene: 145301465

Centisome position: 50.25

GC content: 57.68

Gene sequence:

>267_bases
ATGAGTCACGCCGATATCCTTCACTTCACCAGCCAGGCGCTCTGGCTGGTGTTGATCCTCTCCATGCCACCGGTACTGGT
GGCGGCACTGGTGGGCACCCTTGTCTCTTTGCTGCAAGCGCTGACCCAGATCCAGGAGCAAACCCTGGGCTTTGTCGCCA
AGCTGATCGCCGTGGTGATCACCCTGTTTGCCACCACCGCCTGGCTGGGTAACGAGCTCTACAGCTTTGCCAATATGGTG
TTGTTCAAGGTGCCGCAAATCCAATGA

Upstream 100 bases:

>100_bases
CCCATGACCATCTCGCTGCCCTTCAAGTTGCTGCTGTTTGTGCTGCTCGATGGCTGGGCCCGCCTGACCCACGGGCTGGT
CATCAGTTACGGAGGCTAGC

Downstream 100 bases:

>100_bases
CGCTGGAGAGTCTGCAGGCCCAGATGCTGGCCTATACCCTGCTGCTGCCGCGTTTTATCAGCTGCTTCGTGATGCTGCCG
GTGCTGAGCAAACAGATGCT

Product: AscS protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 88; Mature: 87

Protein sequence:

>88_residues
MSHADILHFTSQALWLVLILSMPPVLVAALVGTLVSLLQALTQIQEQTLGFVAKLIAVVITLFATTAWLGNELYSFANMV
LFKVPQIQ

Sequences:

>Translated_88_residues
MSHADILHFTSQALWLVLILSMPPVLVAALVGTLVSLLQALTQIQEQTLGFVAKLIAVVITLFATTAWLGNELYSFANMV
LFKVPQIQ
>Mature_87_residues
SHADILHFTSQALWLVLILSMPPVLVAALVGTLVSLLQALTQIQEQTLGFVAKLIAVVITLFATTAWLGNELYSFANMVL
FKVPQIQ

Specific function: Component of the Yop secretion machinery [H]

COG id: COG4794

COG function: function code U; Type III secretory pathway, component EscS

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FliQ/MopD/SpaQ family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002191
- InterPro:   IPR006306 [H]

Pfam domain/function: PF01313 Bac_export_3 [H]

EC number: NA

Molecular weight: Translated: 9623; Mature: 9492

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHADILHFTSQALWLVLILSMPPVLVAALVGTLVSLLQALTQIQEQTLGFVAKLIAVVI
CCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLFATTAWLGNELYSFANMVLFKVPQIQ
HHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SHADILHFTSQALWLVLILSMPPVLVAALVGTLVSLLQALTQIQEQTLGFVAKLIAVVI
CCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLFATTAWLGNELYSFANMVLFKVPQIQ
HHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8300512; 9746557; 9748454; 11586360 [H]