Definition Aeromonas salmonicida subsp. salmonicida A449 plasmid 5, complete sequence.
Accession NC_009350
Length 155,098

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The map label for this gene is ascQ [H]

Identifier: 145301462

GI number: 145301462

Start: 76365

End: 77291

Strand: Direct

Name: ascQ [H]

Synonym: ASA_P5G079

Alternate gene names: 145301462

Gene position: 76365-77291 (Clockwise)

Preceding gene: 145301461

Following gene: 145301463

Centisome position: 49.24

GC content: 63.0

Gene sequence:

>927_bases
ATGACACCGATTGCCCTCACCTCCGCCTCGCTGGCGGAGTTGACTTTACAGCAGACCCTGAGCCAGTACCGCCAGCACTT
TGGCTGGAGTGGCGGCGAGCTTCTCCTCGCCATCGGTTTGCCGCCTGCGACGCTCGATACCCTGCTGCAACTGCAGTGGC
AGGGGCTATCTTTGCCGCTGTTGTGCCACGGCGCCGAGCTGGCTCACTGGCTGGCGCCCGACCTGCAGCAGGCGGCGCTG
TTCAGCCTGCCCGAGCAGCTGCAATTGGCACTGATCGAACGACTGGGACAGCCCCTCGGTGGCCTCACCTGCTCGGTGCT
GACCCAACAGGAGAGTAACGTTCAGACCGATGAGACAGCCCTGCAACTGCTGTTGCAACGGGAGGGGGCCAGTCTCGCTC
TCTGGCTGCCGCAGCCCGAGCCCTTGCTGAGCAAGTTGCCACCACGGCCACGGCAGCAGCGGTTGCCGCTACTCCTCACC
CTCTCCCTGCAGTGGGGCGAGATGGGGCTGACCATGGATGAGCTCGCTACCCTTGCTATCGGCGATGTGCTGCTGCCGCC
ACCCGATCCACAGCTCGGCCAGCAACTGCTGATTTGCGTGGAGGGTCGCCCCTTTGCCTACTGCCAACCCAATCAACAAC
ATCTGGAACTAACTGCCATGCATAATGCTGCCTCCGCTGAACCCTTCGGCCCAACCGAATTGGATCAATTGCCGATACAG
GTTAGCTTCGAAGTGGGCCGCCAGACCCTGGACTGGCACACCCTCACCAGCCTGCAACCGGGCGCCCTGATCGATCTTGG
TACGCCCCTCGATGGCGAAGTGCGCATCATCAGCAACGGCCATTTGCTGGGAGTGGGCCGACTGGTGGAGATCCAGGGGC
GCCTGGGTGTACGGGTCGAGCGCCTCGACAACGAGTCACTGTCATGA

Upstream 100 bases:

>100_bases
ATCCCGGCGAGCGGGTCGCCCTCGATCTCTTTAACCAGGCCGACAGTGAGCGAGGCTCGCGCCATAAACGATCCATCTAC
GAAGAGTGGGATGCCGACGC

Downstream 100 bases:

>100_bases
TCCAGTTGCCAGACGAGCTAAACCTTATCGTCGGGCTGGCGCTGCTGGCCCTGCTCCCCTTTATCGCCGTGATGGCCACC
TCCTTCGTCAAGCTGGCGGT

Product: type III secretion system protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 308; Mature: 307

Protein sequence:

>308_residues
MTPIALTSASLAELTLQQTLSQYRQHFGWSGGELLLAIGLPPATLDTLLQLQWQGLSLPLLCHGAELAHWLAPDLQQAAL
FSLPEQLQLALIERLGQPLGGLTCSVLTQQESNVQTDETALQLLLQREGASLALWLPQPEPLLSKLPPRPRQQRLPLLLT
LSLQWGEMGLTMDELATLAIGDVLLPPPDPQLGQQLLICVEGRPFAYCQPNQQHLELTAMHNAASAEPFGPTELDQLPIQ
VSFEVGRQTLDWHTLTSLQPGALIDLGTPLDGEVRIISNGHLLGVGRLVEIQGRLGVRVERLDNESLS

Sequences:

>Translated_308_residues
MTPIALTSASLAELTLQQTLSQYRQHFGWSGGELLLAIGLPPATLDTLLQLQWQGLSLPLLCHGAELAHWLAPDLQQAAL
FSLPEQLQLALIERLGQPLGGLTCSVLTQQESNVQTDETALQLLLQREGASLALWLPQPEPLLSKLPPRPRQQRLPLLLT
LSLQWGEMGLTMDELATLAIGDVLLPPPDPQLGQQLLICVEGRPFAYCQPNQQHLELTAMHNAASAEPFGPTELDQLPIQ
VSFEVGRQTLDWHTLTSLQPGALIDLGTPLDGEVRIISNGHLLGVGRLVEIQGRLGVRVERLDNESLS
>Mature_307_residues
TPIALTSASLAELTLQQTLSQYRQHFGWSGGELLLAIGLPPATLDTLLQLQWQGLSLPLLCHGAELAHWLAPDLQQAALF
SLPEQLQLALIERLGQPLGGLTCSVLTQQESNVQTDETALQLLLQREGASLALWLPQPEPLLSKLPPRPRQQRLPLLLTL
SLQWGEMGLTMDELATLAIGDVLLPPPDPQLGQQLLICVEGRPFAYCQPNQQHLELTAMHNAASAEPFGPTELDQLPIQV
SFEVGRQTLDWHTLTSLQPGALIDLGTPLDGEVRIISNGHLLGVGRLVEIQGRLGVRVERLDNESLS

Specific function: Component of the Yop secretion machinery [H]

COG id: COG1886

COG function: function code NU; Flagellar motor switch/type III secretory pathway protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FliN/MopA/SpaO family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001543
- InterPro:   IPR003283
- InterPro:   IPR013385 [H]

Pfam domain/function: PF01052 SpoA [H]

EC number: NA

Molecular weight: Translated: 33622; Mature: 33491

Theoretical pI: Translated: 4.36; Mature: 4.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPIALTSASLAELTLQQTLSQYRQHFGWSGGELLLAIGLPPATLDTLLQLQWQGLSLPL
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEE
LCHGAELAHWLAPDLQQAALFSLPEQLQLALIERLGQPLGGLTCSVLTQQESNVQTDETA
EECCHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHH
LQLLLQREGASLALWLPQPEPLLSKLPPRPRQQRLPLLLTLSLQWGEMGLTMDELATLAI
HHHHHHCCCCEEEEECCCCCHHHHHCCCCCCHHCCCEEEEEEEECCCCCCCHHHHHHHHH
GDVLLPPPDPQLGQQLLICVEGRPFAYCQPNQQHLELTAMHNAASAEPFGPTELDQLPIQ
CCEECCCCCCCCCCEEEEEECCCCEEEECCCHHHEEEEEECCCCCCCCCCCCCHHHCCEE
VSFEVGRQTLDWHTLTSLQPGALIDLGTPLDGEVRIISNGHLLGVGRLVEIQGRLGVRVE
EEEECCCEEECCHHHCCCCCCCEEECCCCCCCCEEEEECCEEEEECEEEEECCCCCEEEE
RLDNESLS
ECCCCCCC
>Mature Secondary Structure 
TPIALTSASLAELTLQQTLSQYRQHFGWSGGELLLAIGLPPATLDTLLQLQWQGLSLPL
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEE
LCHGAELAHWLAPDLQQAALFSLPEQLQLALIERLGQPLGGLTCSVLTQQESNVQTDETA
EECCHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHH
LQLLLQREGASLALWLPQPEPLLSKLPPRPRQQRLPLLLTLSLQWGEMGLTMDELATLAI
HHHHHHCCCCEEEEECCCCCHHHHHCCCCCCHHCCCEEEEEEEECCCCCCCHHHHHHHHH
GDVLLPPPDPQLGQQLLICVEGRPFAYCQPNQQHLELTAMHNAASAEPFGPTELDQLPIQ
CCEECCCCCCCCCCEEEEEECCCCEEEECCCHHHEEEEEECCCCCCCCCCCCCHHHCCEE
VSFEVGRQTLDWHTLTSLQPGALIDLGTPLDGEVRIISNGHLLGVGRLVEIQGRLGVRVE
EEEECCCEEECCHHHCCCCCCCEEECCCCCCCCEEEEECCEEEEECEEEEECCCCCEEEE
RLDNESLS
ECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8300512; 9746557; 9748454; 11586360 [H]