Definition | Aeromonas salmonicida subsp. salmonicida A449 plasmid 5, complete sequence. |
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Accession | NC_009350 |
Length | 155,098 |
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The map label for this gene is ascQ [H]
Identifier: 145301462
GI number: 145301462
Start: 76365
End: 77291
Strand: Direct
Name: ascQ [H]
Synonym: ASA_P5G079
Alternate gene names: 145301462
Gene position: 76365-77291 (Clockwise)
Preceding gene: 145301461
Following gene: 145301463
Centisome position: 49.24
GC content: 63.0
Gene sequence:
>927_bases ATGACACCGATTGCCCTCACCTCCGCCTCGCTGGCGGAGTTGACTTTACAGCAGACCCTGAGCCAGTACCGCCAGCACTT TGGCTGGAGTGGCGGCGAGCTTCTCCTCGCCATCGGTTTGCCGCCTGCGACGCTCGATACCCTGCTGCAACTGCAGTGGC AGGGGCTATCTTTGCCGCTGTTGTGCCACGGCGCCGAGCTGGCTCACTGGCTGGCGCCCGACCTGCAGCAGGCGGCGCTG TTCAGCCTGCCCGAGCAGCTGCAATTGGCACTGATCGAACGACTGGGACAGCCCCTCGGTGGCCTCACCTGCTCGGTGCT GACCCAACAGGAGAGTAACGTTCAGACCGATGAGACAGCCCTGCAACTGCTGTTGCAACGGGAGGGGGCCAGTCTCGCTC TCTGGCTGCCGCAGCCCGAGCCCTTGCTGAGCAAGTTGCCACCACGGCCACGGCAGCAGCGGTTGCCGCTACTCCTCACC CTCTCCCTGCAGTGGGGCGAGATGGGGCTGACCATGGATGAGCTCGCTACCCTTGCTATCGGCGATGTGCTGCTGCCGCC ACCCGATCCACAGCTCGGCCAGCAACTGCTGATTTGCGTGGAGGGTCGCCCCTTTGCCTACTGCCAACCCAATCAACAAC ATCTGGAACTAACTGCCATGCATAATGCTGCCTCCGCTGAACCCTTCGGCCCAACCGAATTGGATCAATTGCCGATACAG GTTAGCTTCGAAGTGGGCCGCCAGACCCTGGACTGGCACACCCTCACCAGCCTGCAACCGGGCGCCCTGATCGATCTTGG TACGCCCCTCGATGGCGAAGTGCGCATCATCAGCAACGGCCATTTGCTGGGAGTGGGCCGACTGGTGGAGATCCAGGGGC GCCTGGGTGTACGGGTCGAGCGCCTCGACAACGAGTCACTGTCATGA
Upstream 100 bases:
>100_bases ATCCCGGCGAGCGGGTCGCCCTCGATCTCTTTAACCAGGCCGACAGTGAGCGAGGCTCGCGCCATAAACGATCCATCTAC GAAGAGTGGGATGCCGACGC
Downstream 100 bases:
>100_bases TCCAGTTGCCAGACGAGCTAAACCTTATCGTCGGGCTGGCGCTGCTGGCCCTGCTCCCCTTTATCGCCGTGATGGCCACC TCCTTCGTCAAGCTGGCGGT
Product: type III secretion system protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 308; Mature: 307
Protein sequence:
>308_residues MTPIALTSASLAELTLQQTLSQYRQHFGWSGGELLLAIGLPPATLDTLLQLQWQGLSLPLLCHGAELAHWLAPDLQQAAL FSLPEQLQLALIERLGQPLGGLTCSVLTQQESNVQTDETALQLLLQREGASLALWLPQPEPLLSKLPPRPRQQRLPLLLT LSLQWGEMGLTMDELATLAIGDVLLPPPDPQLGQQLLICVEGRPFAYCQPNQQHLELTAMHNAASAEPFGPTELDQLPIQ VSFEVGRQTLDWHTLTSLQPGALIDLGTPLDGEVRIISNGHLLGVGRLVEIQGRLGVRVERLDNESLS
Sequences:
>Translated_308_residues MTPIALTSASLAELTLQQTLSQYRQHFGWSGGELLLAIGLPPATLDTLLQLQWQGLSLPLLCHGAELAHWLAPDLQQAAL FSLPEQLQLALIERLGQPLGGLTCSVLTQQESNVQTDETALQLLLQREGASLALWLPQPEPLLSKLPPRPRQQRLPLLLT LSLQWGEMGLTMDELATLAIGDVLLPPPDPQLGQQLLICVEGRPFAYCQPNQQHLELTAMHNAASAEPFGPTELDQLPIQ VSFEVGRQTLDWHTLTSLQPGALIDLGTPLDGEVRIISNGHLLGVGRLVEIQGRLGVRVERLDNESLS >Mature_307_residues TPIALTSASLAELTLQQTLSQYRQHFGWSGGELLLAIGLPPATLDTLLQLQWQGLSLPLLCHGAELAHWLAPDLQQAALF SLPEQLQLALIERLGQPLGGLTCSVLTQQESNVQTDETALQLLLQREGASLALWLPQPEPLLSKLPPRPRQQRLPLLLTL SLQWGEMGLTMDELATLAIGDVLLPPPDPQLGQQLLICVEGRPFAYCQPNQQHLELTAMHNAASAEPFGPTELDQLPIQV SFEVGRQTLDWHTLTSLQPGALIDLGTPLDGEVRIISNGHLLGVGRLVEIQGRLGVRVERLDNESLS
Specific function: Component of the Yop secretion machinery [H]
COG id: COG1886
COG function: function code NU; Flagellar motor switch/type III secretory pathway protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FliN/MopA/SpaO family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001543 - InterPro: IPR003283 - InterPro: IPR013385 [H]
Pfam domain/function: PF01052 SpoA [H]
EC number: NA
Molecular weight: Translated: 33622; Mature: 33491
Theoretical pI: Translated: 4.36; Mature: 4.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPIALTSASLAELTLQQTLSQYRQHFGWSGGELLLAIGLPPATLDTLLQLQWQGLSLPL CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEE LCHGAELAHWLAPDLQQAALFSLPEQLQLALIERLGQPLGGLTCSVLTQQESNVQTDETA EECCHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHH LQLLLQREGASLALWLPQPEPLLSKLPPRPRQQRLPLLLTLSLQWGEMGLTMDELATLAI HHHHHHCCCCEEEEECCCCCHHHHHCCCCCCHHCCCEEEEEEEECCCCCCCHHHHHHHHH GDVLLPPPDPQLGQQLLICVEGRPFAYCQPNQQHLELTAMHNAASAEPFGPTELDQLPIQ CCEECCCCCCCCCCEEEEEECCCCEEEECCCHHHEEEEEECCCCCCCCCCCCCHHHCCEE VSFEVGRQTLDWHTLTSLQPGALIDLGTPLDGEVRIISNGHLLGVGRLVEIQGRLGVRVE EEEECCCEEECCHHHCCCCCCCEEECCCCCCCCEEEEECCEEEEECEEEEECCCCCEEEE RLDNESLS ECCCCCCC >Mature Secondary Structure TPIALTSASLAELTLQQTLSQYRQHFGWSGGELLLAIGLPPATLDTLLQLQWQGLSLPL CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEE LCHGAELAHWLAPDLQQAALFSLPEQLQLALIERLGQPLGGLTCSVLTQQESNVQTDETA EECCHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHH LQLLLQREGASLALWLPQPEPLLSKLPPRPRQQRLPLLLTLSLQWGEMGLTMDELATLAI HHHHHHCCCCEEEEECCCCCHHHHHCCCCCCHHCCCEEEEEEEECCCCCCCHHHHHHHHH GDVLLPPPDPQLGQQLLICVEGRPFAYCQPNQQHLELTAMHNAASAEPFGPTELDQLPIQ CCEECCCCCCCCCCEEEEEECCCCEEEECCCHHHEEEEEECCCCCCCCCCCCCHHHCCEE VSFEVGRQTLDWHTLTSLQPGALIDLGTPLDGEVRIISNGHLLGVGRLVEIQGRLGVRVE EEEECCCEEECCHHHCCCCCCCEEECCCCCCCCEEEEECCEEEEECEEEEECCCCCEEEE RLDNESLS ECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8300512; 9746557; 9748454; 11586360 [H]