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The map label for this gene is traH [H]

Identifier: 145301422

GI number: 145301422

Start: 35154

End: 36518

Strand: Direct

Name: traH [H]

Synonym: ASA_P5G038

Alternate gene names: 145301422

Gene position: 35154-36518 (Clockwise)

Preceding gene: 145301421

Following gene: 145301423

Centisome position: 22.67

GC content: 55.53

Gene sequence:

>1365_bases
ATGCGACCCGTTAAACAATTCGGTTATGCCGCCCTGATGCTGCTGAGCACCGCCGTCAATGCGGATGTGAACAGCGACCT
GAACGATTTTTTCGGCAAGCTGGGCTTTGAAACCAACACCACCATGCCCCATGCCTGGCAAGGCCAGGCCGCAGGCTATG
CCAGCGGCGGCTCTATTTACATGCGTACTGCTGTCAAGCAGGTGCAGCTGTTCTCGATGCAGGTACCCAGCCTCAATGCC
GGGTGCGGCGGCATCGATGCCTATCTGGGCTCGTTTTCCCATATCACCGGCGACCAGCTCCAACGTTTCGTCAAACAGAT
CATGGGCAATGCTGCCGGGTACTTTTTCGATCTGGCCCTGCAAACCACGGTGCCGGAAATGAAGCAGGCCAAAGACTTTC
TGCAAAAGCTCGCCTCGGATGTGAACTCCATGAACATGAGCAGTTGCCAGGCGGCACAAGGCATCGTTGGCGGGCTATGG
CCAAAAACTGCAGTCAGCCAGCAGAAGATCTGCCAGGACATCTCCGGGGAACAAAACCTGTTCAGCGACTGGGCCGCCTC
CCGCCAGGGCTGTACCCTCGGTGGCCAATATGGCAGCGTGACCGACAAGGCAGACGCCAAAAACAAGGATCAGGTGCTGA
AAAACAAAAACCTGATGTGGGAGTCCCTGGGGAAAAATGGCCTGTTCAGCAGTAACCTCGAGCTCAAAGAGTTTGCCATG
AGTTTGACCGGCACCTTGATCTTCGATGACAAAGGCGAGATCAAACCGCTTGTCGCGCTCACCACCAATGAGGACATCAT
CAAGGCGATGATGAATGGTGGCAGCGCCAAGATCTACGCCTGCGATACCACTTCGCTGTGCCTTAACCCGTCCATTCGAC
CGGTCTCTATCAGTGAGGCCAACGCCCTGAGCGGCCAGGTGAAAGCCATGTTGACCAGCATCCAGAACAAGGCGATCTCC
GACTCGCCCCTGACCGAAAAGGAGAAGGGCTTTATCAGCTCGACCTCCGTGCCAGTGTTGAAATACCTCATCGATCCGCA
ATCACTCGGGGTGGCCAACAGCCTGCTCTACCAGCTCTCCGATTACATCAGTTACGACATTCTCATGCAGTACCTGCAGG
AGTTGATCCAGCAAGCCAGGATCATGCTGGGCAGCAGCAACTACCCTGAGCCTGCCATCGAACAACTCCATCAAAGTCTT
AATCAGTCCAGCCAGAACATCGCCGTGCTGCAATCGCGTGTCCAGATCAATCAAAGTGCGCTGATGGTCGTGGACAGACA
GATGAGCTACATGCGCCAGCAGCTCTCCAGCCGCTTGCTGGAACGCTATCAATCCAACTACCGATTCGGGGGCGCAGGAT
CATAA

Upstream 100 bases:

>100_bases
ATAATGACCTTCCCGATGTTTCAGGGCGCGGTCGCCGCGGATGTGTTTATGACGCGCCTTGATGAGGTGTTTCAGGTAGC
CCTGAGCATAGGAGGCCGCC

Downstream 100 bases:

>100_bases
TGGACACTATCTACACCATCAGCGGCGGGGCATGGTTTCGAGACTCGCTCAATGCCGTGGCGGCGTTTACCCAGTCCAGC
GGAGACTGGGTTTACCTCAT

Product: conjugal transfer pilus assembly protein TraH

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 454; Mature: 454

Protein sequence:

>454_residues
MRPVKQFGYAALMLLSTAVNADVNSDLNDFFGKLGFETNTTMPHAWQGQAAGYASGGSIYMRTAVKQVQLFSMQVPSLNA
GCGGIDAYLGSFSHITGDQLQRFVKQIMGNAAGYFFDLALQTTVPEMKQAKDFLQKLASDVNSMNMSSCQAAQGIVGGLW
PKTAVSQQKICQDISGEQNLFSDWAASRQGCTLGGQYGSVTDKADAKNKDQVLKNKNLMWESLGKNGLFSSNLELKEFAM
SLTGTLIFDDKGEIKPLVALTTNEDIIKAMMNGGSAKIYACDTTSLCLNPSIRPVSISEANALSGQVKAMLTSIQNKAIS
DSPLTEKEKGFISSTSVPVLKYLIDPQSLGVANSLLYQLSDYISYDILMQYLQELIQQARIMLGSSNYPEPAIEQLHQSL
NQSSQNIAVLQSRVQINQSALMVVDRQMSYMRQQLSSRLLERYQSNYRFGGAGS

Sequences:

>Translated_454_residues
MRPVKQFGYAALMLLSTAVNADVNSDLNDFFGKLGFETNTTMPHAWQGQAAGYASGGSIYMRTAVKQVQLFSMQVPSLNA
GCGGIDAYLGSFSHITGDQLQRFVKQIMGNAAGYFFDLALQTTVPEMKQAKDFLQKLASDVNSMNMSSCQAAQGIVGGLW
PKTAVSQQKICQDISGEQNLFSDWAASRQGCTLGGQYGSVTDKADAKNKDQVLKNKNLMWESLGKNGLFSSNLELKEFAM
SLTGTLIFDDKGEIKPLVALTTNEDIIKAMMNGGSAKIYACDTTSLCLNPSIRPVSISEANALSGQVKAMLTSIQNKAIS
DSPLTEKEKGFISSTSVPVLKYLIDPQSLGVANSLLYQLSDYISYDILMQYLQELIQQARIMLGSSNYPEPAIEQLHQSL
NQSSQNIAVLQSRVQINQSALMVVDRQMSYMRQQLSSRLLERYQSNYRFGGAGS
>Mature_454_residues
MRPVKQFGYAALMLLSTAVNADVNSDLNDFFGKLGFETNTTMPHAWQGQAAGYASGGSIYMRTAVKQVQLFSMQVPSLNA
GCGGIDAYLGSFSHITGDQLQRFVKQIMGNAAGYFFDLALQTTVPEMKQAKDFLQKLASDVNSMNMSSCQAAQGIVGGLW
PKTAVSQQKICQDISGEQNLFSDWAASRQGCTLGGQYGSVTDKADAKNKDQVLKNKNLMWESLGKNGLFSSNLELKEFAM
SLTGTLIFDDKGEIKPLVALTTNEDIIKAMMNGGSAKIYACDTTSLCLNPSIRPVSISEANALSGQVKAMLTSIQNKAIS
DSPLTEKEKGFISSTSVPVLKYLIDPQSLGVANSLLYQLSDYISYDILMQYLQELIQQARIMLGSSNYPEPAIEQLHQSL
NQSSQNIAVLQSRVQINQSALMVVDRQMSYMRQQLSSRLLERYQSNYRFGGAGS

Specific function: Involved in pilus assembly [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010927 [H]

Pfam domain/function: PF06122 TraH [H]

EC number: NA

Molecular weight: Translated: 49567; Mature: 49567

Theoretical pI: Translated: 7.30; Mature: 7.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1348105; 7915817; 2656408 [H]