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The map label for this gene is trbB [H]

Identifier: 145301421

GI number: 145301421

Start: 34631

End: 35167

Strand: Direct

Name: trbB [H]

Synonym: ASA_P5G037

Alternate gene names: 145301421

Gene position: 34631-35167 (Clockwise)

Preceding gene: 145301420

Following gene: 145301422

Centisome position: 22.33

GC content: 60.71

Gene sequence:

>537_bases
GTGAACACACTTCGCACGGTTGTACTCACCTCATGGCTGCTGTGCTTGAGCGCCACCGCCTCAACCTGGGATGATATCGC
CCGCCTCGATGCAGCCAAAGCGGCTAGACAGGACACCTCGGCCCAGACGCGGGCTGCCGACCATCCCCCGTTTCGGTTAA
GCGATGGCCGCGCCGTCCGGGTTGAAAACTGGAAGCTGGTGCTGTTCATGCAGTCCACCTGCTCCTACTGCCACCAGTTT
GACCCGGTGCTTAAACAGATAAGCGAGCAAACCGGGATCGCCGTGTTCCCCTACTCGCTGGACGGTCGGGGCGACGCCGC
CTTTCCGGCTGCGCTACCGGCTGGGCCGGATGTGATGGTCGAGTTTTTTAACAACGGCCTGCCCATCGCTACCCCCACGG
TGTTCCTGGTCAACGTCAACACCATAATGACCTTCCCGATGTTTCAGGGCGCGGTCGCCGCGGATGTGTTTATGACGCGC
CTTGATGAGGTGTTTCAGGTAGCCCTGAGCATAGGAGGCCGCCATGCGACCCGTTAA

Upstream 100 bases:

>100_bases
CTCACATGCCCTCCGAGGTCTGCCTTGCCTGGTATGAGGTCGACTTTTGCCAGACCGTTGGCACGCACTTCCGCGAGCGC
CTCACGCAGGGGGAAAGCCT

Downstream 100 bases:

>100_bases
ACAATTCGGTTATGCCGCCCTGATGCTGCTGAGCACCGCCGTCAATGCGGATGTGAACAGCGACCTGAACGATTTTTTCG
GCAAGCTGGGCTTTGAAACC

Product: conjugal transfer protein TrbB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 178; Mature: 178

Protein sequence:

>178_residues
MNTLRTVVLTSWLLCLSATASTWDDIARLDAAKAARQDTSAQTRAADHPPFRLSDGRAVRVENWKLVLFMQSTCSYCHQF
DPVLKQISEQTGIAVFPYSLDGRGDAAFPAALPAGPDVMVEFFNNGLPIATPTVFLVNVNTIMTFPMFQGAVAADVFMTR
LDEVFQVALSIGGRHATR

Sequences:

>Translated_178_residues
MNTLRTVVLTSWLLCLSATASTWDDIARLDAAKAARQDTSAQTRAADHPPFRLSDGRAVRVENWKLVLFMQSTCSYCHQF
DPVLKQISEQTGIAVFPYSLDGRGDAAFPAALPAGPDVMVEFFNNGLPIATPTVFLVNVNTIMTFPMFQGAVAADVFMTR
LDEVFQVALSIGGRHATR
>Mature_178_residues
MNTLRTVVLTSWLLCLSATASTWDDIARLDAAKAARQDTSAQTRAADHPPFRLSDGRAVRVENWKLVLFMQSTCSYCHQF
DPVLKQISEQTGIAVFPYSLDGRGDAAFPAALPAGPDVMVEFFNNGLPIATPTVFLVNVNTIMTFPMFQGAVAADVFMTR
LDEVFQVALSIGGRHATR

Specific function: Unknown. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014109
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19469; Mature: 19469

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTLRTVVLTSWLLCLSATASTWDDIARLDAAKAARQDTSAQTRAADHPPFRLSDGRAVR
CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHCCCCCCCEEECCCCEEE
VENWKLVLFMQSTCSYCHQFDPVLKQISEQTGIAVFPYSLDGRGDAAFPAALPAGPDVMV
EECEEEEEEEHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCCHHHHH
EFFNNGLPIATPTVFLVNVNTIMTFPMFQGAVAADVFMTRLDEVFQVALSIGGRHATR
HHHCCCCCCCCCEEEEEEEHHHEECHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MNTLRTVVLTSWLLCLSATASTWDDIARLDAAKAARQDTSAQTRAADHPPFRLSDGRAVR
CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHCCCCCCCEEECCCCEEE
VENWKLVLFMQSTCSYCHQFDPVLKQISEQTGIAVFPYSLDGRGDAAFPAALPAGPDVMV
EECEEEEEEEHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCCHHHHH
EFFNNGLPIATPTVFLVNVNTIMTFPMFQGAVAADVFMTRLDEVFQVALSIGGRHATR
HHHCCCCCCCCCEEEEEEEHHHEECHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2536655; 7915817 [H]