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The map label for this gene is trbC [H]

Identifier: 145301418

GI number: 145301418

Start: 31037

End: 31645

Strand: Direct

Name: trbC [H]

Synonym: ASA_P5G034

Alternate gene names: 145301418

Gene position: 31037-31645 (Clockwise)

Preceding gene: 145301417

Following gene: 145301419

Centisome position: 20.01

GC content: 55.5

Gene sequence:

>609_bases
ATGAGAACCTACGTGCTTAGCGCTTTATTGATCTTGTTGGCTTCCCCCCTGCAAGCCAGCGAGCTGACCGCTGTCGATAC
CCAGCGGTTCATTGATGATTTGATTGCCAATCCGCCTTCACCTGAACAAATGCAACAGGCCACCGCTCTTGGCCATCAAG
CAAATCAGCGTCAACTACCAGAGAACACCGAGTGGGCTAACCAACTTGCTCGTCAGCGAGATCTGCAAACACCGCAGGGT
AAACCCACCCCGCAAGCCTTTTACTTTGTCTCCTTCTCAATCCCCGAGGAAGGGCTCAAACGTCTCATCCTCGATGCTGA
TGCTTTTGGCATCCCCGCCACCTTACGGGGAATGGTAAAGGGCGACATGCGAGAGACCGCCAACGCAGTGCTGCGCCTCG
TCAACGAAGACAAACGCGGAGGCGTCCAGATTGACCCCAAATCATTTGGCACCTACGGCATCAACGCAGTCCCTGCCCTT
GTTGTTACATGCAACGGCCAATACGACCGCATTGCTGGCAACCTCGCCCTGCGAGAAGCCCTTACCAAGATCGCAGAGTC
CGGTGACTGTGCCGACACAGCCAAAGCCATCTTGGCCGCACACCCCTAA

Upstream 100 bases:

>100_bases
TACCCGCTGGGGAACCGGCCACAACATGCCTAATGACCGGAAAAATTTCGGCTATCTGCTATGGCGCAAACGCAACTGTG
TTTTTTTGTGAGGAATACTG

Downstream 100 bases:

>100_bases
TCGCAAGGAGCAATCCAATGACATTTTCTCGCCCGCTCTTGACGCTTTTTTTGGCTGCGATGTCATTCTCTGTCCCAGTT
ACCGCTAATGAGCAGTACAA

Product: TrbC protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MRTYVLSALLILLASPLQASELTAVDTQRFIDDLIANPPSPEQMQQATALGHQANQRQLPENTEWANQLARQRDLQTPQG
KPTPQAFYFVSFSIPEEGLKRLILDADAFGIPATLRGMVKGDMRETANAVLRLVNEDKRGGVQIDPKSFGTYGINAVPAL
VVTCNGQYDRIAGNLALREALTKIAESGDCADTAKAILAAHP

Sequences:

>Translated_202_residues
MRTYVLSALLILLASPLQASELTAVDTQRFIDDLIANPPSPEQMQQATALGHQANQRQLPENTEWANQLARQRDLQTPQG
KPTPQAFYFVSFSIPEEGLKRLILDADAFGIPATLRGMVKGDMRETANAVLRLVNEDKRGGVQIDPKSFGTYGINAVPAL
VVTCNGQYDRIAGNLALREALTKIAESGDCADTAKAILAAHP
>Mature_202_residues
MRTYVLSALLILLASPLQASELTAVDTQRFIDDLIANPPSPEQMQQATALGHQANQRQLPENTEWANQLARQRDLQTPQG
KPTPQAFYFVSFSIPEEGLKRLILDADAFGIPATLRGMVKGDMRETANAVLRLVNEDKRGGVQIDPKSFGTYGINAVPAL
VVTCNGQYDRIAGNLALREALTKIAESGDCADTAKAILAAHP

Specific function: Essential for F plasmid conjugative transfer, participates in F-pilus assembly [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019106
- InterPro:   IPR014113 [H]

Pfam domain/function: PF09673 TrbC_Ftype [H]

EC number: NA

Molecular weight: Translated: 21911; Mature: 21911

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTYVLSALLILLASPLQASELTAVDTQRFIDDLIANPPSPEQMQQATALGHQANQRQLP
CHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHCCCC
ENTEWANQLARQRDLQTPQGKPTPQAFYFVSFSIPEEGLKRLILDADAFGIPATLRGMVK
CCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHCCCCCCCCHHHHHHHH
GDMRETANAVLRLVNEDKRGGVQIDPKSFGTYGINAVPALVVTCNGQYDRIAGNLALREA
HHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHH
LTKIAESGDCADTAKAILAAHP
HHHHHCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MRTYVLSALLILLASPLQASELTAVDTQRFIDDLIANPPSPEQMQQATALGHQANQRQLP
CHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHCCCC
ENTEWANQLARQRDLQTPQGKPTPQAFYFVSFSIPEEGLKRLILDADAFGIPATLRGMVK
CCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHCCCCCCCCHHHHHHHH
GDMRETANAVLRLVNEDKRGGVQIDPKSFGTYGINAVPALVVTCNGQYDRIAGNLALREA
HHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHH
LTKIAESGDCADTAKAILAAHP
HHHHHCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2050638; 7915817; 2198250; 1593622 [H]