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The map label for this gene is traU [H]

Identifier: 145301417

GI number: 145301417

Start: 30038

End: 31027

Strand: Direct

Name: traU [H]

Synonym: ASA_P5G033

Alternate gene names: 145301417

Gene position: 30038-31027 (Clockwise)

Preceding gene: 145301416

Following gene: 145301418

Centisome position: 19.37

GC content: 56.06

Gene sequence:

>990_bases
ATGATCTACCGCATTACGCTGACCCTGCTGCTGTTTGCAGCGCTCAACAGCCCCCCTGCTCGTGCTTCTGCAGTCGAATG
CGAGGGCCGTTTTGTCAACCCCATCACAGACATCTGCTGGGAATGTCTGTTTCCGATCTCCATTGGAAGCATCGCGGTCT
CCACCGGATCAGCACCCGATACCAGCAACCCCTCAATGCCCATCCAAATCTGCCCGATGGGGATTTTTTACCGTGTTGGC
CTTGCCATCGGTTACTGGGAGCCAATGGCCCTTACGGATGTGACCAGAGCACCCTATTGCCTGGTTAACATGGGTGGTAT
CAGCCTCGGAGTGGGCAAGGTAGGAACCGGCACAGCTGGCCAAAGTGATAAAGATGCCCCGGGCGCTTTCTATCATGTTC
ACTGGTACAAGTACCCGTTGACCTACTGGCTCAACATCATCACCAGTATGGGCTGTCTGCAGGGCGGCGACATGGATATT
GGCTATCTGTCCGAGCTGGATCCGACCTGGAATGACTCCTCTATCGCACTCATTTTGAGCCCCGAGGCCATGCTGTTTAA
CAACGTGATTGCCCAGGGGGCCTGCGCTGCCGATGCCATGGCCAGTGCCTTTGGCAAGCCCATCGACGCACTCTTTTGGT
GTGCGGGCGCTCACGGCTCCATGTACCCCTTCACCGGCTACGTCAGCAATGAGTTCAGCCCCATGCAATCCTCCATTCTG
CTCTCCGAGCGGATGGCCGCCAAGTTGCACCGCCAGGGCATGGTCATGAATTCCATCGGCAAAGACCGTGCCGTCTGTTT
TGAGTACCCCTCAGCCATCGTTCCCAAAGAACGCTGGCGTTACCAAATGGTTAACAAGCACCCCGATGTGGCAGCCTGCC
ATCCATTTGGCCGCACCACTACCCGCTGGGGAACCGGCCACAACATGCCTAATGACCGGAAAAATTTCGGCTATCTGCTA
TGGCGCAAACGCAACTGTGTTTTTTTGTGA

Upstream 100 bases:

>100_bases
TCAGCCAAAAATTTGCTCTCACTGCCGTTCCAGCGGCGGTACATGCGGCCCCCAATGGCAAGCGCCTGCAGATCGATACC
TACGCGCTGGAGCAGACGCC

Downstream 100 bases:

>100_bases
GGAATACTGATGAGAACCTACGTGCTTAGCGCTTTATTGATCTTGTTGGCTTCCCCCCTGCAAGCCAGCGAGCTGACCGC
TGTCGATACCCAGCGGTTCA

Product: conjugal transfer pilus assembly protein TraU

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 329; Mature: 329

Protein sequence:

>329_residues
MIYRITLTLLLFAALNSPPARASAVECEGRFVNPITDICWECLFPISIGSIAVSTGSAPDTSNPSMPIQICPMGIFYRVG
LAIGYWEPMALTDVTRAPYCLVNMGGISLGVGKVGTGTAGQSDKDAPGAFYHVHWYKYPLTYWLNIITSMGCLQGGDMDI
GYLSELDPTWNDSSIALILSPEAMLFNNVIAQGACAADAMASAFGKPIDALFWCAGAHGSMYPFTGYVSNEFSPMQSSIL
LSERMAAKLHRQGMVMNSIGKDRAVCFEYPSAIVPKERWRYQMVNKHPDVAACHPFGRTTTRWGTGHNMPNDRKNFGYLL
WRKRNCVFL

Sequences:

>Translated_329_residues
MIYRITLTLLLFAALNSPPARASAVECEGRFVNPITDICWECLFPISIGSIAVSTGSAPDTSNPSMPIQICPMGIFYRVG
LAIGYWEPMALTDVTRAPYCLVNMGGISLGVGKVGTGTAGQSDKDAPGAFYHVHWYKYPLTYWLNIITSMGCLQGGDMDI
GYLSELDPTWNDSSIALILSPEAMLFNNVIAQGACAADAMASAFGKPIDALFWCAGAHGSMYPFTGYVSNEFSPMQSSIL
LSERMAAKLHRQGMVMNSIGKDRAVCFEYPSAIVPKERWRYQMVNKHPDVAACHPFGRTTTRWGTGHNMPNDRKNFGYLL
WRKRNCVFL
>Mature_329_residues
MIYRITLTLLLFAALNSPPARASAVECEGRFVNPITDICWECLFPISIGSIAVSTGSAPDTSNPSMPIQICPMGIFYRVG
LAIGYWEPMALTDVTRAPYCLVNMGGISLGVGKVGTGTAGQSDKDAPGAFYHVHWYKYPLTYWLNIITSMGCLQGGDMDI
GYLSELDPTWNDSSIALILSPEAMLFNNVIAQGACAADAMASAFGKPIDALFWCAGAHGSMYPFTGYVSNEFSPMQSSIL
LSERMAAKLHRQGMVMNSIGKDRAVCFEYPSAIVPKERWRYQMVNKHPDVAACHPFGRTTTRWGTGHNMPNDRKNFGYLL
WRKRNCVFL

Specific function: Appears to be more essential to conjugal DNA transfer than to assembly of pilus filaments. Required for F plasmid conjugative transfer [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009649 [H]

Pfam domain/function: PF06834 TraU [H]

EC number: NA

Molecular weight: Translated: 36175; Mature: 36175

Theoretical pI: Translated: 7.64; Mature: 7.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
8.2 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
8.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIYRITLTLLLFAALNSPPARASAVECEGRFVNPITDICWECLFPISIGSIAVSTGSAPD
CEEEHHHHHHHHHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCC
TSNPSMPIQICPMGIFYRVGLAIGYWEPMALTDVTRAPYCLVNMGGISLGVGKVGTGTAG
CCCCCCCEEECCCHHHHHHHHHHCCCCCHHHHHCCCCCEEEEECCCCEECCCCCCCCCCC
QSDKDAPGAFYHVHWYKYPLTYWLNIITSMGCLQGGDMDIGYLSELDPTWNDSSIALILS
CCCCCCCCEEEEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCEEEEEEC
PEAMLFNNVIAQGACAADAMASAFGKPIDALFWCAGAHGSMYPFTGYVSNEFSPMQSSIL
CHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHEEECCCCCCCCCEECCCCCCCCHHHHHHH
LSERMAAKLHRQGMVMNSIGKDRAVCFEYPSAIVPKERWRYQMVNKHPDVAACHPFGRTT
HHHHHHHHHHHCCCHHHHCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCCEEECCCCCCC
TRWGTGHNMPNDRKNFGYLLWRKRNCVFL
CCCCCCCCCCCCCCCCCEEEEECCCEECC
>Mature Secondary Structure
MIYRITLTLLLFAALNSPPARASAVECEGRFVNPITDICWECLFPISIGSIAVSTGSAPD
CEEEHHHHHHHHHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCC
TSNPSMPIQICPMGIFYRVGLAIGYWEPMALTDVTRAPYCLVNMGGISLGVGKVGTGTAG
CCCCCCCEEECCCHHHHHHHHHHCCCCCHHHHHCCCCCEEEEECCCCEECCCCCCCCCCC
QSDKDAPGAFYHVHWYKYPLTYWLNIITSMGCLQGGDMDIGYLSELDPTWNDSSIALILS
CCCCCCCCEEEEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCEEEEEEC
PEAMLFNNVIAQGACAADAMASAFGKPIDALFWCAGAHGSMYPFTGYVSNEFSPMQSSIL
CHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHEEECCCCCCCCCEECCCCCCCCHHHHHHH
LSERMAAKLHRQGMVMNSIGKDRAVCFEYPSAIVPKERWRYQMVNKHPDVAACHPFGRTT
HHHHHHHHHHHCCCHHHHCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCCEEECCCCCCC
TRWGTGHNMPNDRKNFGYLLWRKRNCVFL
CCCCCCCCCCCCCCCCCEEEEECCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2198250; 7915817; 2050638; 1355084 [H]