Definition | Aeromonas salmonicida subsp. salmonicida A449 plasmid 5, complete sequence. |
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Accession | NC_009350 |
Length | 155,098 |
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The map label for this gene is 145301399
Identifier: 145301399
GI number: 145301399
Start: 14519
End: 14851
Strand: Reverse
Name: 145301399
Synonym: ASA_P5G015
Alternate gene names: NA
Gene position: 14851-14519 (Counterclockwise)
Preceding gene: 145301402
Following gene: 145301395
Centisome position: 9.58
GC content: 59.16
Gene sequence:
>333_bases TTGGCCGTGACAACCACCCATGGTAGCCCCGACCGGGTAACCATCTTGCCGATGGACTTGGCGCTGCAGGTAGCCCCCTC AATCGGGGACTCCGGCCTGGCGCATAGTCATCGAGCTGCACACGTCCCTGGGCAGCAACAGCACCCTTCCCCCGCGCCGC TGGCGCGAGTGTTGTTTGTGTGTGGACCATCGGCCAAAAAAGCACAGGACAAAAAGAGGGCAGGCGCAGCGCGGTGGAAA ACCTATGCCCTCGCTTACTGGATGCAACGGACACACTGTGAAATGTCAGTGCGTTCCCTCATTTGGTCAGATTACCCACA CATGGCACAATAG
Upstream 100 bases:
>100_bases CCTTGGGTGGCTCTTTGGCTCATAACTGAATCGCCTCTGCTATAGGGGTAGGGAACTGTTTCATTCAATGATTTAAGAGA GTGTTGCCTACGGTACGGGG
Downstream 100 bases:
>100_bases TTTTTTGGATGCAAGGCTGTGGAGGAAATGTGGATCCGAGCAGAAGTGGGCAGTGGTGGATGGCAGCGCTGGGGAGAAAG CGAATGGGAAGGCGAGAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 110; Mature: 109
Protein sequence:
>110_residues MAVTTTHGSPDRVTILPMDLALQVAPSIGDSGLAHSHRAAHVPGQQQHPSPAPLARVLFVCGPSAKKAQDKKRAGAARWK TYALAYWMQRTHCEMSVRSLIWSDYPHMAQ
Sequences:
>Translated_110_residues MAVTTTHGSPDRVTILPMDLALQVAPSIGDSGLAHSHRAAHVPGQQQHPSPAPLARVLFVCGPSAKKAQDKKRAGAARWK TYALAYWMQRTHCEMSVRSLIWSDYPHMAQ >Mature_109_residues AVTTTHGSPDRVTILPMDLALQVAPSIGDSGLAHSHRAAHVPGQQQHPSPAPLARVLFVCGPSAKKAQDKKRAGAARWKT YALAYWMQRTHCEMSVRSLIWSDYPHMAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12054; Mature: 11923
Theoretical pI: Translated: 10.29; Mature: 10.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVTTTHGSPDRVTILPMDLALQVAPSIGDSGLAHSHRAAHVPGQQQHPSPAPLARVLFV CEEECCCCCCCEEEEEECCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH CGPSAKKAQDKKRAGAARWKTYALAYWMQRTHCEMSVRSLIWSDYPHMAQ CCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure AVTTTHGSPDRVTILPMDLALQVAPSIGDSGLAHSHRAAHVPGQQQHPSPAPLARVLFV EEECCCCCCCEEEEEECCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH CGPSAKKAQDKKRAGAARWKTYALAYWMQRTHCEMSVRSLIWSDYPHMAQ CCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA