Definition | Aeromonas salmonicida subsp. salmonicida A449 plasmid 5, complete sequence. |
---|---|
Accession | NC_009350 |
Length | 155,098 |
Click here to switch to the map view.
The map label for this gene is 145301395
Identifier: 145301395
GI number: 145301395
Start: 9614
End: 10645
Strand: Reverse
Name: 145301395
Synonym: ASA_P5G010
Alternate gene names: NA
Gene position: 10645-9614 (Counterclockwise)
Preceding gene: 145301399
Following gene: 145301393
Centisome position: 6.86
GC content: 52.23
Gene sequence:
>1032_bases ATGCCTATCCTACCACCCCTGCCACGACCACAACTGCGCCGCATTCACAAAATCATCCATGCCACCCGTGATAAAGGACA TGCTCGTCGCTTGATGGCCATCTTGCTGTTACATGAAGGACGTACGGTCACCGATGTTCATCACCTTACCGGCGCTGCGC GCTCGACCATCGGTCGTTGGCTTCGGTGGTATCGAGATGAAGGTATAGATGCGCTAGAAGCCTTACCGGCTGGCCGTGCC CCAGTTTTACCTATCGCCAAGATGGTCACCTTACTGGTGCTGCTCATGCAGTTTTCTCCGCAAGATTTTGGTTATCAGCG CAGCCGTTGGTGTACCGAACTATTGGCTATCAAAATCAATCGGTTAACAGGGCTCAATGTGGCCGCCTCCACACTTCGTC GATGGTTACCTCGTATGGGGATTGTCTGGCGCAGGCCCGTGCCGACCTTGCGGATAAAAGACCCGGCCTATCAGGAGAAA ATGGCGAATATCGACGCCGTGCTGGCCCGTTGTAATGCAGATAATCCGGTGTTTTATGAGGATGAAGTCGATATAGACCT CAATCCCAAATTAGGGGCCGACTGGATGTTCAGAGCGCAACAAAAGCGGGTTGTCACTCCGGGGCAGAATGCCAAGCATT ACCTGGCAGGCGTTCTTCATGCAGGCAACGGAAGAGTGCTTTACGTCAGCGGGATAAAGAAAAACTCATCGCTGTTTATC GCCATGCTGGAAAAGCTGCGCCACCACTACCGACGAGCCAAAACCATCACGCTGATCCTCGATAACTACATCATTCACAA AAGCAAACAGACCGAGCGATGGTTGAAGAAGAACCCCAAGTTCTGCCTGGTATTCCAGCCAGTTTACAGTCCTTGGGTTA ATCACATCGAACGGCTGTGGCACAAGTTACATGAAACCATCACGCGCAATCATCAATGCAGAGGGATGGCCAACCTGCTG GCTCGAGTGAAATACTTCATGGATACCGTGTCTCCTTTCCCCGGGAATGGCTATGGCACAGCGAAGGTGTAG
Upstream 100 bases:
>100_bases TGTTCCGAATAGTAGATCACCGGAGGAAGGGAACTCAGTCCAGTTTGTGCGATCTCATTAGTCGCCAAACAAAACAAGCC ACACCCAAAGGACTGAGTTG
Downstream 100 bases:
>100_bases CACTATTAGGATCAGTTATTTAGAAGCCCGCTTGCTGACCCGCACTATCAACGGCAAAGAGCGGCAGGTGCTGACCTCAA TGGTCGACCCGATGCGTTTC
Product: IS630 family transposase
Products: NA
Alternate protein names: ISO-IS200 39 kDa protein [H]
Number of amino acids: Translated: 343; Mature: 342
Protein sequence:
>343_residues MPILPPLPRPQLRRIHKIIHATRDKGHARRLMAILLLHEGRTVTDVHHLTGAARSTIGRWLRWYRDEGIDALEALPAGRA PVLPIAKMVTLLVLLMQFSPQDFGYQRSRWCTELLAIKINRLTGLNVAASTLRRWLPRMGIVWRRPVPTLRIKDPAYQEK MANIDAVLARCNADNPVFYEDEVDIDLNPKLGADWMFRAQQKRVVTPGQNAKHYLAGVLHAGNGRVLYVSGIKKNSSLFI AMLEKLRHHYRRAKTITLILDNYIIHKSKQTERWLKKNPKFCLVFQPVYSPWVNHIERLWHKLHETITRNHQCRGMANLL ARVKYFMDTVSPFPGNGYGTAKV
Sequences:
>Translated_343_residues MPILPPLPRPQLRRIHKIIHATRDKGHARRLMAILLLHEGRTVTDVHHLTGAARSTIGRWLRWYRDEGIDALEALPAGRA PVLPIAKMVTLLVLLMQFSPQDFGYQRSRWCTELLAIKINRLTGLNVAASTLRRWLPRMGIVWRRPVPTLRIKDPAYQEK MANIDAVLARCNADNPVFYEDEVDIDLNPKLGADWMFRAQQKRVVTPGQNAKHYLAGVLHAGNGRVLYVSGIKKNSSLFI AMLEKLRHHYRRAKTITLILDNYIIHKSKQTERWLKKNPKFCLVFQPVYSPWVNHIERLWHKLHETITRNHQCRGMANLL ARVKYFMDTVSPFPGNGYGTAKV >Mature_342_residues PILPPLPRPQLRRIHKIIHATRDKGHARRLMAILLLHEGRTVTDVHHLTGAARSTIGRWLRWYRDEGIDALEALPAGRAP VLPIAKMVTLLVLLMQFSPQDFGYQRSRWCTELLAIKINRLTGLNVAASTLRRWLPRMGIVWRRPVPTLRIKDPAYQEKM ANIDAVLARCNADNPVFYEDEVDIDLNPKLGADWMFRAQQKRVVTPGQNAKHYLAGVLHAGNGRVLYVSGIKKNSSLFIA MLEKLRHHYRRAKTITLILDNYIIHKSKQTERWLKKNPKFCLVFQPVYSPWVNHIERLWHKLHETITRNHQCRGMANLLA RVKYFMDTVSPFPGNGYGTAKV
Specific function: Unknown
COG id: COG3335
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009057 - InterPro: IPR001584 [H]
Pfam domain/function: PF00665 rve [H]
EC number: NA
Molecular weight: Translated: 39595; Mature: 39464
Theoretical pI: Translated: 11.02; Mature: 11.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPILPPLPRPQLRRIHKIIHATRDKGHARRLMAILLLHEGRTVTDVHHLTGAARSTIGRW CCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH LRWYRDEGIDALEALPAGRAPVLPIAKMVTLLVLLMQFSPQDFGYQRSRWCTELLAIKIN HHHHHHCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH RLTGLNVAASTLRRWLPRMGIVWRRPVPTLRIKDPAYQEKMANIDAVLARCNADNPVFYE HCCCCHHHHHHHHHHHHHCCCEECCCCCCEEECCHHHHHHHHHHHHHHHHCCCCCCEEEC DEVDIDLNPKLGADWMFRAQQKRVVTPGQNAKHYLAGVLHAGNGRVLYVSGIKKNSSLFI CCCCEECCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHEECCCCCEEEEECCCCCCHHHH AMLEKLRHHYRRAKTITLILDNYIIHKSKQTERWLKKNPKFCLVFQPVYSPWVNHIERLW HHHHHHHHHHHHHHEEEEEEHHHHHCCCHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHH HKLHETITRNHQCRGMANLLARVKYFMDTVSPFPGNGYGTAKV HHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure PILPPLPRPQLRRIHKIIHATRDKGHARRLMAILLLHEGRTVTDVHHLTGAARSTIGRW CCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH LRWYRDEGIDALEALPAGRAPVLPIAKMVTLLVLLMQFSPQDFGYQRSRWCTELLAIKIN HHHHHHCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH RLTGLNVAASTLRRWLPRMGIVWRRPVPTLRIKDPAYQEKMANIDAVLARCNADNPVFYE HCCCCHHHHHHHHHHHHHCCCEECCCCCCEEECCHHHHHHHHHHHHHHHHCCCCCCEEEC DEVDIDLNPKLGADWMFRAQQKRVVTPGQNAKHYLAGVLHAGNGRVLYVSGIKKNSSLFI CCCCEECCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHEECCCCCEEEEECCCCCCHHHH AMLEKLRHHYRRAKTITLILDNYIIHKSKQTERWLKKNPKFCLVFQPVYSPWVNHIERLW HHHHHHHHHHHHHHEEEEEEHHHHHCCCHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHH HKLHETITRNHQCRGMANLLARVKYFMDTVSPFPGNGYGTAKV HHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2824781 [H]