| Definition | Aeromonas salmonicida subsp. salmonicida A449, complete genome. |
|---|---|
| Accession | NC_009348 |
| Length | 4,702,402 |
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The map label for this gene is glnD [H]
Identifier: 145300063
GI number: 145300063
Start: 3424188
End: 3426884
Strand: Direct
Name: glnD [H]
Synonym: ASA_3163
Alternate gene names: 145300063
Gene position: 3424188-3426884 (Clockwise)
Preceding gene: 145300062
Following gene: 145300064
Centisome position: 72.82
GC content: 62.07
Gene sequence:
>2697_bases GTGAGATGCCATGGATGCCAGCCTGCTTTCCCCCATCTGTTACCCGACGATCAGCTCACCCGCGAGAACTGCAAAGAGTA TCTGGGCCGCTTTCTCGGCTGGTTGCACGCCCGTTTCGATGCCGGCGACAACATCATAGAGCTGGTTGCGACCCGTTCCG AATACATGGATGTGCTGCTGACCCGACTGTGGCAGAAGTTTGGCTTCGACAAGACAGATCTCAGCCTGATAGCCGTCGGC GGCTATGGCCGTGGCGAGTTGCATCCCCACTCCGACATCGACCTGCTCATCCTCTATGAAGGGGATGAGCTGGACGAGGT ACTGGGACTGCGCATCGGTGAGTTCATTACCCTGCTGTGGGATCTCAAGCTGGAGGTGGGTCAGGCAGTACGCAACGTGG CCGAATGCATCGAGCAGGGCCGCGCCGACATCACGGTCGCCACCAACCTCATAGAGGCCCGTTTCATCACAGGCCGCAAA GCCGGTTTCGAGCAGCTCACCCTGGCCACGCGTCCCGAGCGCTTCTGGCCAAGCGAGCAGTTCTTTCAGGCCAAGCGCGA AGAGCAGGCCCTGCGCCACCAGCAATTTCTTGGCACTGCCTACAAGCTGGAGCCCGACCTCAAGAGCAACCCTGGCGGAC TGAGAGACATTCAGACCCTGGCCTGGGTCGCCCGCCGCCACTTCGGCGCCACCACCTTGTTCGAGATGACCAGCCACGGC TTTCTCAACCGGGCTGAGTACCGTGAACTGCTCGATTGTCAGAACTTCCTGTGGAAGGTGCGCTTCGCCCTGCACATGGC CATCAACAAGGGTGACAACCGGCTGCTGTTCGACCGCCAGCGTACCGTGGCCCAGATGTTGGGGTTCGAGGGGGAAGGCA ACAGCCCGGTCGAGCAGATGATGAAGCGCTTCTACCAGACGGTGCGGCGAGTCTCCGAGCTCAACGAGATGCTGCTGCAG CTGTTTGACGAGGCGATCCTCGGCAACACCGCCATGGACGTGCGCCGCCTCTGCGACGAATTCCAGCTGCGTGGCCGCCT CATCGATGCGGTGGACTCAGAGCTGTTTGGCCGTGAGCCCGCTGCCATACTGCGGCTCTTCTACCAGATAGCCCAGCATC CCGAGATTGCCGGCATTCACTCCGCCACCTTGCGCCAGCTGCGCGAGGCGAGGCGCAAACTCAATTGCTGGCTGCAGGAT TTGCCCGATTGCCGCCGCCTGTTCATGGCGCTGCTGCGCCACCCCAACGGCATCGGCCAGCCCCTCACCCTGATGCACAA ATACGGCATACTGGCGGCCTACCTGCCCCAGTGGAACCTCATCGTCGGCCAGATGCAGTTCGACATGTTCCACGCCTATA CGGTCGATGAGCACACCCACCGGCTGCTCAAGAACATTCACCAGTTTCCCAATCCGGCCAGCCGCCAGACCCACCCGCTC TGCCACGAGGTGTTTACCCGGCTGCGCAAGCCGGAACTGCTCAGCATAGCGGCCCTGTTCCACGACATCGCCAAGGGGCG CCGCGGGGATCACTCAGAGCTAGGCGCCGTGGACGCACTGGAGTTCTGCCAACTACATGGCCTGGATCGCTACGAGAGCC GACTGGTGGCCTGGCTGGTGCGCCACCATCTGCTGATGTCGGTCACCGCCCAGCGCCGCGACATCTATGACCCGGACGTG GTCACCGACTTCGCCCAGAAGGTGCGCGACGAGCAGCACCTCGACCTTATCTATTGCCTGACGGTGGCCGATATCTGCGC CACCAACGACACCCTCTGGAACGACTGGAAAGGCACCCTGCTGCGCGAACTCTATTTCGCCACCCAGAAAGCCCTGCGCC AAGGGCTGGAAAACCCGCCCGACATGCGACTGCGTATTTGTGAGAACCAGCGCCAGGCCAAGCAAATTCTGGCCCAGCGG GACGTGCCGGAAGAGGCCATCAACCAGCTGTGGAGCGACTTCAAGGCCGACTACTTCCTGCGCCATACCCCTGAGCAGAT CGCCTGGCATTGCCGCAAGATCATCGAGCACGGCGACAATCCGGCACCGCTGGTGATCATCGGCAAGCACCCGACCCGGG GTGGCAGCGAGGTCTTTATCTACTGCCGCGACACACCGAATCTGTTTGCCACCGTGGCCTCAGCACTGGATCAGAAAAAC CTCAACATCCATGATGCCCAGATCATGAATTCCCGCAGCGACTATGTGCTGGATACCTTCGTGGTGCTGGAGCCCAGCGG CGAGCCCATCAGCCCCAACCGCACCGCCACCATCAGAAAGGCGCTGGAGAAAGCACTGCAGGAACCGGGCAAGCTGGTGC TGCGCAACAAGCCGCTGTCCCGGCGCCACCGTCAGTTCAGCGTACCGACCCGGGTGGTGTTTCTGCCCCACAAGGGCGAA ACCCGTCACACCCTGCTGGAACTGACGGCACTGGATACCCCTGGCCTGCTGGCTCGTATCGGCGCCGTGTTCCAGCAGTG TGGCCTCTCCCTGCACGCGGCCAAAATCACCACCATAGGCGAGCGAGTGGAGGACTTTTTCAGCCTCACCACACTGGCGG GGGAGCCGCTGAACCAGGCCGAACAGCTGGCGCTGGAGGATCGACTGGTGAGCCAGCTCAACCCGCAGGAATCGGCGGAT GAAGCCCCTGACGGCGAGCCGTTGACAGGCCTCACAAGGCGCCTTTCCTCATCCTGA
Upstream 100 bases:
>100_bases CGCTATATCAAACACGGTTAACATCAAAAACCCCGGCGCCGAAGCGAGAAGGCACCGGGGTTTGTTTTTATCAGCCGCTG TGTATGCGTGCGACAAGAGC
Downstream 100 bases:
>100_bases TTCTTCAAATAGAACAAGTGGTTGGGCCACCTGAGTATAATAAATCGCCATTCTCCTGAAGAAATCGGCTTGAGCCCTTA AAAACAATTGGAAAAGTGTG
Product: protein-P-II uridylyltransferase
Products: NA
Alternate protein names: PII uridylyl-transferase; UTase; Uridylyl-removing enzyme [H]
Number of amino acids: Translated: 898; Mature: 898
Protein sequence:
>898_residues MRCHGCQPAFPHLLPDDQLTRENCKEYLGRFLGWLHARFDAGDNIIELVATRSEYMDVLLTRLWQKFGFDKTDLSLIAVG GYGRGELHPHSDIDLLILYEGDELDEVLGLRIGEFITLLWDLKLEVGQAVRNVAECIEQGRADITVATNLIEARFITGRK AGFEQLTLATRPERFWPSEQFFQAKREEQALRHQQFLGTAYKLEPDLKSNPGGLRDIQTLAWVARRHFGATTLFEMTSHG FLNRAEYRELLDCQNFLWKVRFALHMAINKGDNRLLFDRQRTVAQMLGFEGEGNSPVEQMMKRFYQTVRRVSELNEMLLQ LFDEAILGNTAMDVRRLCDEFQLRGRLIDAVDSELFGREPAAILRLFYQIAQHPEIAGIHSATLRQLREARRKLNCWLQD LPDCRRLFMALLRHPNGIGQPLTLMHKYGILAAYLPQWNLIVGQMQFDMFHAYTVDEHTHRLLKNIHQFPNPASRQTHPL CHEVFTRLRKPELLSIAALFHDIAKGRRGDHSELGAVDALEFCQLHGLDRYESRLVAWLVRHHLLMSVTAQRRDIYDPDV VTDFAQKVRDEQHLDLIYCLTVADICATNDTLWNDWKGTLLRELYFATQKALRQGLENPPDMRLRICENQRQAKQILAQR DVPEEAINQLWSDFKADYFLRHTPEQIAWHCRKIIEHGDNPAPLVIIGKHPTRGGSEVFIYCRDTPNLFATVASALDQKN LNIHDAQIMNSRSDYVLDTFVVLEPSGEPISPNRTATIRKALEKALQEPGKLVLRNKPLSRRHRQFSVPTRVVFLPHKGE TRHTLLELTALDTPGLLARIGAVFQQCGLSLHAAKITTIGERVEDFFSLTTLAGEPLNQAEQLALEDRLVSQLNPQESAD EAPDGEPLTGLTRRLSSS
Sequences:
>Translated_898_residues MRCHGCQPAFPHLLPDDQLTRENCKEYLGRFLGWLHARFDAGDNIIELVATRSEYMDVLLTRLWQKFGFDKTDLSLIAVG GYGRGELHPHSDIDLLILYEGDELDEVLGLRIGEFITLLWDLKLEVGQAVRNVAECIEQGRADITVATNLIEARFITGRK AGFEQLTLATRPERFWPSEQFFQAKREEQALRHQQFLGTAYKLEPDLKSNPGGLRDIQTLAWVARRHFGATTLFEMTSHG FLNRAEYRELLDCQNFLWKVRFALHMAINKGDNRLLFDRQRTVAQMLGFEGEGNSPVEQMMKRFYQTVRRVSELNEMLLQ LFDEAILGNTAMDVRRLCDEFQLRGRLIDAVDSELFGREPAAILRLFYQIAQHPEIAGIHSATLRQLREARRKLNCWLQD LPDCRRLFMALLRHPNGIGQPLTLMHKYGILAAYLPQWNLIVGQMQFDMFHAYTVDEHTHRLLKNIHQFPNPASRQTHPL CHEVFTRLRKPELLSIAALFHDIAKGRRGDHSELGAVDALEFCQLHGLDRYESRLVAWLVRHHLLMSVTAQRRDIYDPDV VTDFAQKVRDEQHLDLIYCLTVADICATNDTLWNDWKGTLLRELYFATQKALRQGLENPPDMRLRICENQRQAKQILAQR DVPEEAINQLWSDFKADYFLRHTPEQIAWHCRKIIEHGDNPAPLVIIGKHPTRGGSEVFIYCRDTPNLFATVASALDQKN LNIHDAQIMNSRSDYVLDTFVVLEPSGEPISPNRTATIRKALEKALQEPGKLVLRNKPLSRRHRQFSVPTRVVFLPHKGE TRHTLLELTALDTPGLLARIGAVFQQCGLSLHAAKITTIGERVEDFFSLTTLAGEPLNQAEQLALEDRLVSQLNPQESAD EAPDGEPLTGLTRRLSSS >Mature_898_residues MRCHGCQPAFPHLLPDDQLTRENCKEYLGRFLGWLHARFDAGDNIIELVATRSEYMDVLLTRLWQKFGFDKTDLSLIAVG GYGRGELHPHSDIDLLILYEGDELDEVLGLRIGEFITLLWDLKLEVGQAVRNVAECIEQGRADITVATNLIEARFITGRK AGFEQLTLATRPERFWPSEQFFQAKREEQALRHQQFLGTAYKLEPDLKSNPGGLRDIQTLAWVARRHFGATTLFEMTSHG FLNRAEYRELLDCQNFLWKVRFALHMAINKGDNRLLFDRQRTVAQMLGFEGEGNSPVEQMMKRFYQTVRRVSELNEMLLQ LFDEAILGNTAMDVRRLCDEFQLRGRLIDAVDSELFGREPAAILRLFYQIAQHPEIAGIHSATLRQLREARRKLNCWLQD LPDCRRLFMALLRHPNGIGQPLTLMHKYGILAAYLPQWNLIVGQMQFDMFHAYTVDEHTHRLLKNIHQFPNPASRQTHPL CHEVFTRLRKPELLSIAALFHDIAKGRRGDHSELGAVDALEFCQLHGLDRYESRLVAWLVRHHLLMSVTAQRRDIYDPDV VTDFAQKVRDEQHLDLIYCLTVADICATNDTLWNDWKGTLLRELYFATQKALRQGLENPPDMRLRICENQRQAKQILAQR DVPEEAINQLWSDFKADYFLRHTPEQIAWHCRKIIEHGDNPAPLVIIGKHPTRGGSEVFIYCRDTPNLFATVASALDQKN LNIHDAQIMNSRSDYVLDTFVVLEPSGEPISPNRTATIRKALEKALQEPGKLVLRNKPLSRRHRQFSVPTRVVFLPHKGE TRHTLLELTALDTPGLLARIGAVFQQCGLSLHAAKITTIGERVEDFFSLTTLAGEPLNQAEQLALEDRLVSQLNPQESAD EAPDGEPLTGLTRRLSSS
Specific function: Modifies, by uridylylation or deuridylylation the PII (glnB) regulatory protein [H]
COG id: COG2844
COG function: function code O; UTP:GlnB (protein PII) uridylyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glnD family [H]
Homologues:
Organism=Escherichia coli, GI1786363, Length=880, Percent_Identity=53.8636363636364, Blast_Score=930, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002912 - InterPro: IPR010043 - InterPro: IPR003607 - InterPro: IPR002934 - InterPro: IPR013546 [H]
Pfam domain/function: PF01842 ACT; PF08335 GlnD_UR_UTase; PF01909 NTP_transf_2 [H]
EC number: =2.7.7.59 [H]
Molecular weight: Translated: 102967; Mature: 102967
Theoretical pI: Translated: 6.87; Mature: 6.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRCHGCQPAFPHLLPDDQLTRENCKEYLGRFLGWLHARFDAGDNIIELVATRSEYMDVLL CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH TRLWQKFGFDKTDLSLIAVGGYGRGELHPHSDIDLLILYEGDELDEVLGLRIGEFITLLW HHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHH DLKLEVGQAVRNVAECIEQGRADITVATNLIEARFITGRKAGFEQLTLATRPERFWPSEQ HHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCHH FFQAKREEQALRHQQFLGTAYKLEPDLKSNPGGLRDIQTLAWVARRHFGATTLFEMTSHG HHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCC FLNRAEYRELLDCQNFLWKVRFALHMAINKGDNRLLFDRQRTVAQMLGFEGEGNSPVEQM CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHCCCCCCCCHHHHH MKRFYQTVRRVSELNEMLLQLFDEAILGNTAMDVRRLCDEFQLRGRLIDAVDSELFGREP HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH AAILRLFYQIAQHPEIAGIHSATLRQLREARRKLNCWLQDLPDCRRLFMALLRHPNGIGQ HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCC PLTLMHKYGILAAYLPQWNLIVGQMQFDMFHAYTVDEHTHRLLKNIHQFPNPASRQTHPL HHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHEEECCHHHHHHHHHHHHCCCCCCCCCCHH CHEVFTRLRKPELLSIAALFHDIAKGRRGDHSELGAVDALEFCQLHGLDRYESRLVAWLV HHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHCHHHHHHHHHHCCCCHHHHHHHHHHH RHHLLMSVTAQRRDIYDPDVVTDFAQKVRDEQHLDLIYCLTVADICATNDTLWNDWKGTL HHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH LRELYFATQKALRQGLENPPDMRLRICENQRQAKQILAQRDVPEEAINQLWSDFKADYFL HHHHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHH RHTPEQIAWHCRKIIEHGDNPAPLVIIGKHPTRGGSEVFIYCRDTPNLFATVASALDQKN HCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCC LNIHDAQIMNSRSDYVLDTFVVLEPSGEPISPNRTATIRKALEKALQEPGKLVLRNKPLS CCCCHHHHHCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEEECCCCHH RRHRQFSVPTRVVFLPHKGETRHTLLELTALDTPGLLARIGAVFQQCGLSLHAAKITTIG HHHHHCCCCEEEEEECCCCCCHHHHEEEHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHH ERVEDFFSLTTLAGEPLNQAEQLALEDRLVSQLNPQESADEAPDGEPLTGLTRRLSSS HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCC >Mature Secondary Structure MRCHGCQPAFPHLLPDDQLTRENCKEYLGRFLGWLHARFDAGDNIIELVATRSEYMDVLL CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH TRLWQKFGFDKTDLSLIAVGGYGRGELHPHSDIDLLILYEGDELDEVLGLRIGEFITLLW HHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHH DLKLEVGQAVRNVAECIEQGRADITVATNLIEARFITGRKAGFEQLTLATRPERFWPSEQ HHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCHH FFQAKREEQALRHQQFLGTAYKLEPDLKSNPGGLRDIQTLAWVARRHFGATTLFEMTSHG HHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCC FLNRAEYRELLDCQNFLWKVRFALHMAINKGDNRLLFDRQRTVAQMLGFEGEGNSPVEQM CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHCCCCCCCCHHHHH MKRFYQTVRRVSELNEMLLQLFDEAILGNTAMDVRRLCDEFQLRGRLIDAVDSELFGREP HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH AAILRLFYQIAQHPEIAGIHSATLRQLREARRKLNCWLQDLPDCRRLFMALLRHPNGIGQ HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCC PLTLMHKYGILAAYLPQWNLIVGQMQFDMFHAYTVDEHTHRLLKNIHQFPNPASRQTHPL HHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHEEECCHHHHHHHHHHHHCCCCCCCCCCHH CHEVFTRLRKPELLSIAALFHDIAKGRRGDHSELGAVDALEFCQLHGLDRYESRLVAWLV HHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHCHHHHHHHHHHCCCCHHHHHHHHHHH RHHLLMSVTAQRRDIYDPDVVTDFAQKVRDEQHLDLIYCLTVADICATNDTLWNDWKGTL HHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH LRELYFATQKALRQGLENPPDMRLRICENQRQAKQILAQRDVPEEAINQLWSDFKADYFL HHHHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHH RHTPEQIAWHCRKIIEHGDNPAPLVIIGKHPTRGGSEVFIYCRDTPNLFATVASALDQKN HCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCC LNIHDAQIMNSRSDYVLDTFVVLEPSGEPISPNRTATIRKALEKALQEPGKLVLRNKPLS CCCCHHHHHCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEEECCCCHH RRHRQFSVPTRVVFLPHKGETRHTLLELTALDTPGLLARIGAVFQQCGLSLHAAKITTIG HHHHHCCCCEEEEEECCCCCCHHHHEEEHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHH ERVEDFFSLTTLAGEPLNQAEQLALEDRLVSQLNPQESADEAPDGEPLTGLTRRLSSS HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA