| Definition | Aeromonas salmonicida subsp. salmonicida A449, complete genome. |
|---|---|
| Accession | NC_009348 |
| Length | 4,702,402 |
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The map label for this gene is chb [H]
Identifier: 145300008
GI number: 145300008
Start: 3353503
End: 3355368
Strand: Direct
Name: chb [H]
Synonym: ASA_3107
Alternate gene names: 145300008
Gene position: 3353503-3355368 (Clockwise)
Preceding gene: 145300007
Following gene: 145300009
Centisome position: 71.31
GC content: 64.47
Gene sequence:
>1866_bases ATGTCTACACCCCTGATCCACACCCAGGTTGACCGACGCGATGGCGAGGACGTCTGGTTCCGATTCAGCCTGAGCCAGTT GCCGGCAGCCCCCTGGAAACTTCACTTCTGCCTGGCACGCCACATAGATCCCGCCTCCCTCGAAGGTGCCAGACTGGAGC GCCAGAGCGGCAGCTACAAGGTGCTGATCCCGGCCGAGGGGCAAAGCGAGCTGCGTTTTTGCTGTCGCAACACCCCCATC AAGCGATTGTCTGACATGCCGCAGGGCTTCTTCCTGAGCCTGCCCGAGGCGAGCACGGGCACCCAGCTGATGCCGGTCAC CTTGGTGGAACAAGAGCTGGGCCTGCCGCCAAGCGGGCCCGGCGCCCCGGATCTGCCAGAGGTCGAGCCCCTCACCGGCA TAGTGCCCCAGCCAGATCAGCTGGTGCTGCTGGAGGGCAACTTCCGGCTGGCGGAGCGGGCTCATGTCAGCGGGCCCGGG TCGCTGACCGGCCTGCTGGCCCATTTCAACGAGCTGACTGGGCTAGCGCTGGAGCAGGATCATGATGCCGAGATCCGGCT GTTCGAGGCCCCCCTGGCTGCCGAAGCCTATCGCCTCACCATCACGCCTGAGGGGGTGACCATAGCCGCAGCTGGCGAGG CTGGCTGGCGCCACGGCCTGACAAGCCTGGCCCAGTGGGCTCTGCAGCACGGAGAGAGCCTGCCCTGCATCGAGCTGGTC GATGCCCCCCGCTTCGGTTTTCGCGGCATCTTCCTCGACTGCGCCCGCCACTTTCACCCCGTCGCTAACCTCAAGCGCCT GCTCAAACTGATGAGCCTCTACAAGTTCAACCGCTTCCACTGGCATCTGACCGATGACGAGGGGTGGCGGCTCGAGATCA AGGCTTTCCCGCAACTGACAGAAATCGCCGCCTGGCGTGGCCACGATCTGCCAGTGGGGCCCCAGCTCAGTGGCGGCCCC GAACCCTATGGCGGCTACTACACCCAAAGCGAGGTACGCGAGCTGGTGGCTTATGCCAGCGAGCTCGGTATTACCGTCAT CCCCGAGATCGACATCCCGGGCCACTGCCACGCCGCCATCAAGGCGCTGCCCGGGCTACTGATCGAGGAAGCGGATCGCT CCCGCTACCTGTCGGTGCAATATTTCGACGACAACGTGCTCAACCCGGCCCTGCCCGGCACCTATCAGTTCCTGGAGGCG GTAATCGACGAGGTGTGCGAGCTGTTCCCGGGCCCCTTGGTACACATGGGGGGGGACGAGGTACCGACCGGAGTATGGAC CGACAGCCCGGCCTGCCAGCAGTTGATGCAACGGCAGGGATATCAGGATTACCGCGAGCTGCAGGGCCACCTGCTGCGCC ACTGCCAACAGTATCTGGCCAGCAAGGGCAAGCAGATGCTGGGTTGGGAGGAGATATTGCACGGCGACAAGGTAAGCCGG GATGCCACCATCTTCGCCTGGACCAGCTTCCAGGCAGGGCTGGATGCCGCGGCTGCGGGCTATCCCGTTGTGATGGCACC GGCCCAGCACCTCTATCTGGATCTGGCCTGGAGCCAGGATCCCCGAGAACCCGGCCTCTACTGGGCGGGCACCCTCAATC TGGAGCAGGTCTATCGATGTGATCCTGCCCCGGCCGATTTCCATGCCAACGATAACATCCTGGGGGTGCTGAGCCCCTTA TGGTCGGAACTGGTTACCTCTCGTGACCGTCTCGACTATATGTTGTTCCCGCGCATGCTGGCCACCGCCGAGGTGGCCTG GAGCGACGCCACCCGCAAGGCGTGGGATCACTTCGCCGCCCGCCTGCCGGGCCAGCTGCAGATCCTCGACCAGCTACAGG TGCGTTATCGGGTGCCACAGAGGTAG
Upstream 100 bases:
>100_bases GAATACCCATGCCTGCACTTTGGATCCCTCCCCGGGTTGACCAGTACCACAAGGAGATGATCGCCCTGTTTGTTCCCTTA ACTCCATCAGAGGAATTTTC
Downstream 100 bases:
>100_bases TGTTATCTTTCTGTCTGGCGACCTTTGGGTCGCCTTTTTTTACCATCCACCAACAAAAAACCAACTTTCCCCTACCATTC ATCCGCCATTGTTGGCAAAA
Product: N-acetyl-beta-hexosaminidase
Products: NA
Alternate protein names: Beta-N-acetylhexosaminidase; N-acetyl-beta-glucosaminidase [H]
Number of amino acids: Translated: 621; Mature: 620
Protein sequence:
>621_residues MSTPLIHTQVDRRDGEDVWFRFSLSQLPAAPWKLHFCLARHIDPASLEGARLERQSGSYKVLIPAEGQSELRFCCRNTPI KRLSDMPQGFFLSLPEASTGTQLMPVTLVEQELGLPPSGPGAPDLPEVEPLTGIVPQPDQLVLLEGNFRLAERAHVSGPG SLTGLLAHFNELTGLALEQDHDAEIRLFEAPLAAEAYRLTITPEGVTIAAAGEAGWRHGLTSLAQWALQHGESLPCIELV DAPRFGFRGIFLDCARHFHPVANLKRLLKLMSLYKFNRFHWHLTDDEGWRLEIKAFPQLTEIAAWRGHDLPVGPQLSGGP EPYGGYYTQSEVRELVAYASELGITVIPEIDIPGHCHAAIKALPGLLIEEADRSRYLSVQYFDDNVLNPALPGTYQFLEA VIDEVCELFPGPLVHMGGDEVPTGVWTDSPACQQLMQRQGYQDYRELQGHLLRHCQQYLASKGKQMLGWEEILHGDKVSR DATIFAWTSFQAGLDAAAAGYPVVMAPAQHLYLDLAWSQDPREPGLYWAGTLNLEQVYRCDPAPADFHANDNILGVLSPL WSELVTSRDRLDYMLFPRMLATAEVAWSDATRKAWDHFAARLPGQLQILDQLQVRYRVPQR
Sequences:
>Translated_621_residues MSTPLIHTQVDRRDGEDVWFRFSLSQLPAAPWKLHFCLARHIDPASLEGARLERQSGSYKVLIPAEGQSELRFCCRNTPI KRLSDMPQGFFLSLPEASTGTQLMPVTLVEQELGLPPSGPGAPDLPEVEPLTGIVPQPDQLVLLEGNFRLAERAHVSGPG SLTGLLAHFNELTGLALEQDHDAEIRLFEAPLAAEAYRLTITPEGVTIAAAGEAGWRHGLTSLAQWALQHGESLPCIELV DAPRFGFRGIFLDCARHFHPVANLKRLLKLMSLYKFNRFHWHLTDDEGWRLEIKAFPQLTEIAAWRGHDLPVGPQLSGGP EPYGGYYTQSEVRELVAYASELGITVIPEIDIPGHCHAAIKALPGLLIEEADRSRYLSVQYFDDNVLNPALPGTYQFLEA VIDEVCELFPGPLVHMGGDEVPTGVWTDSPACQQLMQRQGYQDYRELQGHLLRHCQQYLASKGKQMLGWEEILHGDKVSR DATIFAWTSFQAGLDAAAAGYPVVMAPAQHLYLDLAWSQDPREPGLYWAGTLNLEQVYRCDPAPADFHANDNILGVLSPL WSELVTSRDRLDYMLFPRMLATAEVAWSDATRKAWDHFAARLPGQLQILDQLQVRYRVPQR >Mature_620_residues STPLIHTQVDRRDGEDVWFRFSLSQLPAAPWKLHFCLARHIDPASLEGARLERQSGSYKVLIPAEGQSELRFCCRNTPIK RLSDMPQGFFLSLPEASTGTQLMPVTLVEQELGLPPSGPGAPDLPEVEPLTGIVPQPDQLVLLEGNFRLAERAHVSGPGS LTGLLAHFNELTGLALEQDHDAEIRLFEAPLAAEAYRLTITPEGVTIAAAGEAGWRHGLTSLAQWALQHGESLPCIELVD APRFGFRGIFLDCARHFHPVANLKRLLKLMSLYKFNRFHWHLTDDEGWRLEIKAFPQLTEIAAWRGHDLPVGPQLSGGPE PYGGYYTQSEVRELVAYASELGITVIPEIDIPGHCHAAIKALPGLLIEEADRSRYLSVQYFDDNVLNPALPGTYQFLEAV IDEVCELFPGPLVHMGGDEVPTGVWTDSPACQQLMQRQGYQDYRELQGHLLRHCQQYLASKGKQMLGWEEILHGDKVSRD ATIFAWTSFQAGLDAAAAGYPVVMAPAQHLYLDLAWSQDPREPGLYWAGTLNLEQVYRCDPAPADFHANDNILGVLSPLW SELVTSRDRLDYMLFPRMLATAEVAWSDATRKAWDHFAARLPGQLQILDQLQVRYRVPQR
Specific function: Hydrolyzes rapidly p-nitrophenyl-N-acetyl-beta-D- glucosaminide (PNP-beta-GlcNAc) and 4-methylumbelliferyl-beta- GlcNAc, and slightly active on p-nitrophenyl-beta-GalNAc. Hydrolyzes aryl-N-acetyl-beta-D-glucosaminide (aryl-beta-GlcNAc), aryl-beta-GalNAc a
COG id: COG3525
COG function: function code G; N-acetyl-beta-hexosaminidase
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 20 family [H]
Homologues:
Organism=Homo sapiens, GI4504373, Length=443, Percent_Identity=27.313769751693, Blast_Score=161, Evalue=2e-39, Organism=Homo sapiens, GI189181666, Length=300, Percent_Identity=30.3333333333333, Blast_Score=149, Evalue=1e-35, Organism=Caenorhabditis elegans, GI17569815, Length=422, Percent_Identity=25.8293838862559, Blast_Score=149, Evalue=4e-36, Organism=Drosophila melanogaster, GI24657468, Length=493, Percent_Identity=26.1663286004057, Blast_Score=138, Evalue=1e-32, Organism=Drosophila melanogaster, GI17647501, Length=493, Percent_Identity=26.1663286004057, Blast_Score=138, Evalue=1e-32, Organism=Drosophila melanogaster, GI281365639, Length=493, Percent_Identity=26.1663286004057, Blast_Score=138, Evalue=1e-32, Organism=Drosophila melanogaster, GI24657474, Length=493, Percent_Identity=26.1663286004057, Blast_Score=138, Evalue=1e-32, Organism=Drosophila melanogaster, GI24653074, Length=424, Percent_Identity=28.0660377358491, Blast_Score=124, Evalue=2e-28, Organism=Drosophila melanogaster, GI45551090, Length=424, Percent_Identity=28.0660377358491, Blast_Score=124, Evalue=2e-28, Organism=Drosophila melanogaster, GI17933586, Length=438, Percent_Identity=26.2557077625571, Blast_Score=99, Evalue=8e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015882 - InterPro: IPR001540 - InterPro: IPR015883 - InterPro: IPR017853 - InterPro: IPR013781 [H]
Pfam domain/function: PF00728 Glyco_hydro_20; PF02838 Glyco_hydro_20b [H]
EC number: =3.2.1.52 [H]
Molecular weight: Translated: 69331; Mature: 69199
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTPLIHTQVDRRDGEDVWFRFSLSQLPAAPWKLHFCLARHIDPASLEGARLERQSGSYK CCCCCEEEECCCCCCCCEEEEEEHHHCCCCCHHHHHHHHHCCCCCCCCCCHHHCCCCCEE VLIPAEGQSELRFCCRNTPIKRLSDMPQGFFLSLPEASTGTQLMPVTLVEQELGLPPSGP EEEECCCCHHHHHHHCCCCHHHHHCCCCCEEEECCCCCCCCEEEEEEEEHHHCCCCCCCC GAPDLPEVEPLTGIVPQPDQLVLLEGNFRLAERAHVSGPGSLTGLLAHFNELTGLALEQD CCCCCCCCCCCCCCCCCCCCEEEEECCEEEEHHCCCCCCHHHHHHHHHHHHHHCCEECCC HDAEIRLFEAPLAAEAYRLTITPEGVTIAAAGEAGWRHGLTSLAQWALQHGESLPCIELV CCCEEEEEECCCCCCEEEEEECCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCEEEEE DAPRFGFRGIFLDCARHFHPVANLKRLLKLMSLYKFNRFHWHLTDDEGWRLEIKAFPQLT CCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEEEECCCHH EIAAWRGHDLPVGPQLSGGPEPYGGYYTQSEVRELVAYASELGITVIPEIDIPGHCHAAI HHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHH KALPGLLIEEADRSRYLSVQYFDDNVLNPALPGTYQFLEAVIDEVCELFPGPLVHMGGDE HHCCCHHHHHCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEECCCCC VPTGVWTDSPACQQLMQRQGYQDYRELQGHLLRHCQQYLASKGKQMLGWEEILHGDKVSR CCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHCCCCCCC DATIFAWTSFQAGLDAAAAGYPVVMAPAQHLYLDLAWSQDPREPGLYWAGTLNLEQVYRC CCEEEEEECCCCCCCHHHCCCCEEECCCCEEEEEEEECCCCCCCCEEEEEECCHHHHHCC DPAPADFHANDNILGVLSPLWSELVTSRDRLDYMLFPRMLATAEVAWSDATRKAWDHFAA CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH RLPGQLQILDQLQVRYRVPQR HCCCHHHHHHHHHHHHCCCCC >Mature Secondary Structure STPLIHTQVDRRDGEDVWFRFSLSQLPAAPWKLHFCLARHIDPASLEGARLERQSGSYK CCCCEEEECCCCCCCCEEEEEEHHHCCCCCHHHHHHHHHCCCCCCCCCCHHHCCCCCEE VLIPAEGQSELRFCCRNTPIKRLSDMPQGFFLSLPEASTGTQLMPVTLVEQELGLPPSGP EEEECCCCHHHHHHHCCCCHHHHHCCCCCEEEECCCCCCCCEEEEEEEEHHHCCCCCCCC GAPDLPEVEPLTGIVPQPDQLVLLEGNFRLAERAHVSGPGSLTGLLAHFNELTGLALEQD CCCCCCCCCCCCCCCCCCCCEEEEECCEEEEHHCCCCCCHHHHHHHHHHHHHHCCEECCC HDAEIRLFEAPLAAEAYRLTITPEGVTIAAAGEAGWRHGLTSLAQWALQHGESLPCIELV CCCEEEEEECCCCCCEEEEEECCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCEEEEE DAPRFGFRGIFLDCARHFHPVANLKRLLKLMSLYKFNRFHWHLTDDEGWRLEIKAFPQLT CCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEEEECCCHH EIAAWRGHDLPVGPQLSGGPEPYGGYYTQSEVRELVAYASELGITVIPEIDIPGHCHAAI HHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHH KALPGLLIEEADRSRYLSVQYFDDNVLNPALPGTYQFLEAVIDEVCELFPGPLVHMGGDE HHCCCHHHHHCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEECCCCC VPTGVWTDSPACQQLMQRQGYQDYRELQGHLLRHCQQYLASKGKQMLGWEEILHGDKVSR CCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHCCCCCCC DATIFAWTSFQAGLDAAAAGYPVVMAPAQHLYLDLAWSQDPREPGLYWAGTLNLEQVYRC CCEEEEEECCCCCCCHHHCCCCEEECCCCEEEEEEEECCCCCCCCEEEEEECCHHHHHCC DPAPADFHANDNILGVLSPLWSELVTSRDRLDYMLFPRMLATAEVAWSDATRKAWDHFAA CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH RLPGQLQILDQLQVRYRVPQR HCCCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8969205 [H]