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The map label for this gene is recN [H]

Identifier: 145299907

GI number: 145299907

Start: 3233109

End: 3234773

Strand: Direct

Name: recN [H]

Synonym: ASA_2999

Alternate gene names: 145299907

Gene position: 3233109-3234773 (Clockwise)

Preceding gene: 145299906

Following gene: 145299908

Centisome position: 68.75

GC content: 62.34

Gene sequence:

>1665_bases
ATGCTGACCCAGCTGACCGTCAACAACTTCGCTATCGTCAAGTTTCTCGAACTCGATCTGCAACCCGGCATGACCTGCAT
CACGGGTGAGACGGGTGCCGGTAAATCCATCGCCATAGACGCACTCGGCCTCTGTCTGGGTGAGCGGGCAGAGGCAAGCA
TGGTGCGCCCCGATAGCGACAAGACAGAGGTCAGCGCCCGTTTCCTGCTGGACGGCAACCCAGCCGCCCGCGCCTGGCTC
GCCGCCAACGAGCTGGAAAACGAAGGTGAATGCATAGTGCGGCGGGTGCTCTCTGCCGAAGGACGATCACGCAGCTACAT
CAACGGCGTGCCCGTCCCCCTGACCCAGCTTAAAAATCTCGGTCAACTGCTGGTCAACGTCCACGGCCAGCACGCCCACC
AGCTCCTGCTCAAACCCGACTACCAGCTCAGCTTGCTGGATGGCTATGCCGGCCATCACCTGCTGCTGGAAGAAGTGCGC
CAGCATTATCAGCTCTGGCGTCAGCTGCAAAACGAGCTCAATCGCCTCAAGGCCGAACAGCAACAGCGGGAAGCCCGCCG
TCAGCTCATCGAATATCAAGTGCAGGAGCTGGACGAATTTGCCTTGCAACCGGGGGAATTCGAGGCCATTGAAGAGGAGC
ATCAGCGGCTCGCCAACGGCACCGAACTGATGCAGGAGTGCGGCGCCTGTCTCGATCTGCTCTATGACAACGAAGAGACC
ACCATCGCCGGCCTGTTGCAGGTCGCCGTCGACAAAGCCGAGAGTCTGGTGGGCATGGACAGCCGCCTCAGCCCTGTGCT
GGAGATGCTTAACGAGGCGATGATAGGCGTGCAGGAGAGCCACAGCGAGCTGCGCAGCTATCTGGATCGGCTTGAGCTGG
ACCCTGAGCGCTTCACCGAGCTGGAGGCGCGCCTCTCCAAAGCCATCAATCTGGCCCGCAAGCACCATGTCAAGCCGGCC
GAGCTGGCACTGCACCATCAGGATCTTGCCAGTGATCTCGCCCGCCTCAACTCGGACGAAGAGCGCCTGGAAGGCATGGA
AGATGAACTGGCCGAAGCCCGCCTTGCCTTCGTACAGGCCGCAGAGGCTCTGAGCCAGAGCCGTCAGCGTTACGCCGAGG
AGCTCGGCACCAAGGTGACCGCCAGCATGCACGAACTGGCGATGCCGGACGGTCGCTTCGCCATCGAGGTACGGCCGGAT
GCCCAGAGCAGCCTGTCGCCGCTCGGCATTGATCGGGTGGAATTTATGGTCACCACCAACCCGGGGCAACCAATCCAGCC
GCTGGGCAAGGTGGCCTCGGGCGGTGAACTGTCGCGGATCAGCCTCGCCATCGTCGTGATCAGCGCCCGCAAGGTCTCGA
CCCCGACCCTGATTTTCGATGAGGTGGACGTGGGGATCAGCGGCCCCACCGCCGCCGTGGTGGGTCGTTTGCTGCGCCAG
CTCGGTGAATCCACACAGGTCATGGTGGTCACTCACCTGCCCCAGGTAGCAGGCAAGGGCCACCAGCACATGGTGGTGAG
CAAGCACACAGACGGCAAGACAACGGAAACCCAGATGCAGGCACTGGATCAGGGCGCCCGCCTCAAGGAGCTGGCTCGTC
TGCTGGGCGGTGACCATATCACCGACAATACCCTGGCCAACGCTCGCGAGCTGCTTGCCTCCTGA

Upstream 100 bases:

>100_bases
GTCCCCTGCTCATCCTGTTGCGGGCCGACTCTTTACTGTATGGAAAACCAGTATATACTGGATGCATACACAGTAATGTT
GGCCCATACAGGATGAGACC

Downstream 100 bases:

>100_bases
GAAGGGACGCCCAACACGGCCAGTAAAAGGGGAGCCTCACACCTGCGGGTGTGAGGCTCCCCTTCTTTATATGGCTATCT
GACGTTGCGATCGCCCGATC

Product: recombination and repair protein

Products: NA

Alternate protein names: Recombination protein N [H]

Number of amino acids: Translated: 554; Mature: 554

Protein sequence:

>554_residues
MLTQLTVNNFAIVKFLELDLQPGMTCITGETGAGKSIAIDALGLCLGERAEASMVRPDSDKTEVSARFLLDGNPAARAWL
AANELENEGECIVRRVLSAEGRSRSYINGVPVPLTQLKNLGQLLVNVHGQHAHQLLLKPDYQLSLLDGYAGHHLLLEEVR
QHYQLWRQLQNELNRLKAEQQQREARRQLIEYQVQELDEFALQPGEFEAIEEEHQRLANGTELMQECGACLDLLYDNEET
TIAGLLQVAVDKAESLVGMDSRLSPVLEMLNEAMIGVQESHSELRSYLDRLELDPERFTELEARLSKAINLARKHHVKPA
ELALHHQDLASDLARLNSDEERLEGMEDELAEARLAFVQAAEALSQSRQRYAEELGTKVTASMHELAMPDGRFAIEVRPD
AQSSLSPLGIDRVEFMVTTNPGQPIQPLGKVASGGELSRISLAIVVISARKVSTPTLIFDEVDVGISGPTAAVVGRLLRQ
LGESTQVMVVTHLPQVAGKGHQHMVVSKHTDGKTTETQMQALDQGARLKELARLLGGDHITDNTLANARELLAS

Sequences:

>Translated_554_residues
MLTQLTVNNFAIVKFLELDLQPGMTCITGETGAGKSIAIDALGLCLGERAEASMVRPDSDKTEVSARFLLDGNPAARAWL
AANELENEGECIVRRVLSAEGRSRSYINGVPVPLTQLKNLGQLLVNVHGQHAHQLLLKPDYQLSLLDGYAGHHLLLEEVR
QHYQLWRQLQNELNRLKAEQQQREARRQLIEYQVQELDEFALQPGEFEAIEEEHQRLANGTELMQECGACLDLLYDNEET
TIAGLLQVAVDKAESLVGMDSRLSPVLEMLNEAMIGVQESHSELRSYLDRLELDPERFTELEARLSKAINLARKHHVKPA
ELALHHQDLASDLARLNSDEERLEGMEDELAEARLAFVQAAEALSQSRQRYAEELGTKVTASMHELAMPDGRFAIEVRPD
AQSSLSPLGIDRVEFMVTTNPGQPIQPLGKVASGGELSRISLAIVVISARKVSTPTLIFDEVDVGISGPTAAVVGRLLRQ
LGESTQVMVVTHLPQVAGKGHQHMVVSKHTDGKTTETQMQALDQGARLKELARLLGGDHITDNTLANARELLAS
>Mature_554_residues
MLTQLTVNNFAIVKFLELDLQPGMTCITGETGAGKSIAIDALGLCLGERAEASMVRPDSDKTEVSARFLLDGNPAARAWL
AANELENEGECIVRRVLSAEGRSRSYINGVPVPLTQLKNLGQLLVNVHGQHAHQLLLKPDYQLSLLDGYAGHHLLLEEVR
QHYQLWRQLQNELNRLKAEQQQREARRQLIEYQVQELDEFALQPGEFEAIEEEHQRLANGTELMQECGACLDLLYDNEET
TIAGLLQVAVDKAESLVGMDSRLSPVLEMLNEAMIGVQESHSELRSYLDRLELDPERFTELEARLSKAINLARKHHVKPA
ELALHHQDLASDLARLNSDEERLEGMEDELAEARLAFVQAAEALSQSRQRYAEELGTKVTASMHELAMPDGRFAIEVRPD
AQSSLSPLGIDRVEFMVTTNPGQPIQPLGKVASGGELSRISLAIVVISARKVSTPTLIFDEVDVGISGPTAAVVGRLLRQ
LGESTQVMVVTHLPQVAGKGHQHMVVSKHTDGKTTETQMQALDQGARLKELARLLGGDHITDNTLANARELLAS

Specific function: May be involved in recombinational repair of damaged DNA [H]

COG id: COG0497

COG function: function code L; ATPase involved in DNA repair

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recN family [H]

Homologues:

Organism=Escherichia coli, GI48994901, Length=554, Percent_Identity=57.942238267148, Blast_Score=626, Evalue=1e-180,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004604
- InterPro:   IPR003395 [H]

Pfam domain/function: PF02463 SMC_N [H]

EC number: NA

Molecular weight: Translated: 61101; Mature: 61101

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTQLTVNNFAIVKFLELDLQPGMTCITGETGAGKSIAIDALGLCLGERAEASMVRPDSD
CCCEEEECCCCEEHHEEHHCCCCCEEEECCCCCCCEEHHHHHHHHHCCCCCCCCCCCCCC
KTEVSARFLLDGNPAARAWLAANELENEGECIVRRVLSAEGRSRSYINGVPVPLTQLKNL
CCCEEEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH
GQLLVNVHGQHAHQLLLKPDYQLSLLDGYAGHHLLLEEVRQHYQLWRQLQNELNRLKAEQ
HHHHHHCCCCHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QQREARRQLIEYQVQELDEFALQPGEFEAIEEEHQRLANGTELMQECGACLDLLYDNEET
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
TIAGLLQVAVDKAESLVGMDSRLSPVLEMLNEAMIGVQESHSELRSYLDRLELDPERFTE
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCHHHHHH
LEARLSKAINLARKHHVKPAELALHHQDLASDLARLNSDEERLEGMEDELAEARLAFVQA
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHH
AEALSQSRQRYAEELGTKVTASMHELAMPDGRFAIEVRPDAQSSLSPLGIDRVEFMVTTN
HHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCEEEEEEECC
PGQPIQPLGKVASGGELSRISLAIVVISARKVSTPTLIFDEVDVGISGPTAAVVGRLLRQ
CCCCCCHHHHHCCCCCCHHEEEEEEEEECCCCCCCEEEEECCCCCCCCCHHHHHHHHHHH
LGESTQVMVVTHLPQVAGKGHQHMVVSKHTDGKTTETQMQALDQGARLKELARLLGGDHI
HCCCCEEEEEEECHHHHCCCCCEEEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCC
TDNTLANARELLAS
CCHHHHHHHHHHCC
>Mature Secondary Structure
MLTQLTVNNFAIVKFLELDLQPGMTCITGETGAGKSIAIDALGLCLGERAEASMVRPDSD
CCCEEEECCCCEEHHEEHHCCCCCEEEECCCCCCCEEHHHHHHHHHCCCCCCCCCCCCCC
KTEVSARFLLDGNPAARAWLAANELENEGECIVRRVLSAEGRSRSYINGVPVPLTQLKNL
CCCEEEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH
GQLLVNVHGQHAHQLLLKPDYQLSLLDGYAGHHLLLEEVRQHYQLWRQLQNELNRLKAEQ
HHHHHHCCCCHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QQREARRQLIEYQVQELDEFALQPGEFEAIEEEHQRLANGTELMQECGACLDLLYDNEET
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
TIAGLLQVAVDKAESLVGMDSRLSPVLEMLNEAMIGVQESHSELRSYLDRLELDPERFTE
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCHHHHHH
LEARLSKAINLARKHHVKPAELALHHQDLASDLARLNSDEERLEGMEDELAEARLAFVQA
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHH
AEALSQSRQRYAEELGTKVTASMHELAMPDGRFAIEVRPDAQSSLSPLGIDRVEFMVTTN
HHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCEEEEEEECC
PGQPIQPLGKVASGGELSRISLAIVVISARKVSTPTLIFDEVDVGISGPTAAVVGRLLRQ
CCCCCCHHHHHCCCCCCHHEEEEEEEEECCCCCCCEEEEECCCCCCCCCHHHHHHHHHHH
LGESTQVMVVTHLPQVAGKGHQHMVVSKHTDGKTTETQMQALDQGARLKELARLLGGDHI
HCCCCEEEEEEECHHHHCCCCCEEEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCC
TDNTLANARELLAS
CCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 3037486; 9205837; 9278503 [H]