| Definition | Aeromonas salmonicida subsp. salmonicida A449, complete genome. |
|---|---|
| Accession | NC_009348 |
| Length | 4,702,402 |
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The map label for this gene is 145299880
Identifier: 145299880
GI number: 145299880
Start: 3196432
End: 3197280
Strand: Direct
Name: 145299880
Synonym: ASA_2971
Alternate gene names: NA
Gene position: 3196432-3197280 (Clockwise)
Preceding gene: 145299879
Following gene: 145299881
Centisome position: 67.97
GC content: 61.6
Gene sequence:
>849_bases ATGGCGATGTGTCGATATCTGGTGGCGGACGGGCGTCACTGCAGCGAGGAGGCAGGGGAGCACGAGCTGTGCCGCTGGCA CGATCCCCACGCCGATCATCAGGCCCCCCAGACGGCTCATGAGCTTGAGCACTACATTCATCAAGGCGGTCTGTGCCACG GCCTGCAACTGGCCCGTGCCAACCTGGCCGGGCTCAATCTGGTGAAGAAGGGGGCACCGCAGGGCTTCTTGCTGGAGCAG TGCAACTTCTATCGGGCCAACCTGCAAGGTGCCCACCTCTATGGCATTCGCATCAAGGGCGGCAGCCTGATGAAGGCGGA TCTCAGTGACGCCAACCTCCACTGCGCCGAACTCGACAACGTCAATCTGCTCGGCATCCGCTGGCACAACACCCGCCTCG ACAACCTCAATACCGGCAAACGACTGATGCAGGAGCGGCGCGGACGCAGCGAGCGGGATCCGGCGCAAGCCCGCATCTGG TTCAAGGAGGCGGAAGAGACCTACCGGGATCTGCGCAAGGCCTCGGAGGCGCAAGGCATCTTCACCATGTCCGGCCGCTA CATACAGCGAGAGCTCACCATGCGCCGCCTTCAGTTGCCACTCTGGTCAATCCAGAGGTTCACCTCCTGGATCGTCGATC TCTTCTGCGGCTACGGCGAGGCGCCGATGCGGGTGGTGCTCTTCTCCCTGCTGCTCATCTTCATCTGCAGTATCTTCTAC TTCTTCTTCGGCCTGAACTTCCAGGGGGAGTACCTCATCTACCAGCCCGGCGCCGCCTTCGAGGCCTTTACCGGCAGCTT CACGCTGGCGCTGTTTGTGGTGGTGTTCGTGAAAAAGATGACACGGTGA
Upstream 100 bases:
>100_bases TTTTCGCAAACTGCGTCAGGAGTTTACCCAGCTCAGCTGACCCGGAAGCGGCTCCTCTCGCCTATGCTGATACAGACTCG GCGAGGGGAGGAAAACCGCA
Downstream 100 bases:
>100_bases GTGGCTCCGCCCTCCCCGGCCAGCGTTCGCGCCGGGGCAAGCTCCCACGCAAGCGGGGCCAAGCCGGCCCCTGAACTTGC ATCCGCAGCAGATTCCTAGT
Product: pentapeptide repeat-containing protein
Products: NA
Alternate protein names: Low-Complexity Protein; Pentapeptide Repeat Family Protein; Pentapeptide Repeat-Containing Protein; Potassium Channel Protein; Pentapeptide Repeat Protein; Ion Transport 2 Domain Protein
Number of amino acids: Translated: 282; Mature: 281
Protein sequence:
>282_residues MAMCRYLVADGRHCSEEAGEHELCRWHDPHADHQAPQTAHELEHYIHQGGLCHGLQLARANLAGLNLVKKGAPQGFLLEQ CNFYRANLQGAHLYGIRIKGGSLMKADLSDANLHCAELDNVNLLGIRWHNTRLDNLNTGKRLMQERRGRSERDPAQARIW FKEAEETYRDLRKASEAQGIFTMSGRYIQRELTMRRLQLPLWSIQRFTSWIVDLFCGYGEAPMRVVLFSLLLIFICSIFY FFFGLNFQGEYLIYQPGAAFEAFTGSFTLALFVVVFVKKMTR
Sequences:
>Translated_282_residues MAMCRYLVADGRHCSEEAGEHELCRWHDPHADHQAPQTAHELEHYIHQGGLCHGLQLARANLAGLNLVKKGAPQGFLLEQ CNFYRANLQGAHLYGIRIKGGSLMKADLSDANLHCAELDNVNLLGIRWHNTRLDNLNTGKRLMQERRGRSERDPAQARIW FKEAEETYRDLRKASEAQGIFTMSGRYIQRELTMRRLQLPLWSIQRFTSWIVDLFCGYGEAPMRVVLFSLLLIFICSIFY FFFGLNFQGEYLIYQPGAAFEAFTGSFTLALFVVVFVKKMTR >Mature_281_residues AMCRYLVADGRHCSEEAGEHELCRWHDPHADHQAPQTAHELEHYIHQGGLCHGLQLARANLAGLNLVKKGAPQGFLLEQC NFYRANLQGAHLYGIRIKGGSLMKADLSDANLHCAELDNVNLLGIRWHNTRLDNLNTGKRLMQERRGRSERDPAQARIWF KEAEETYRDLRKASEAQGIFTMSGRYIQRELTMRRLQLPLWSIQRFTSWIVDLFCGYGEAPMRVVLFSLLLIFICSIFYF FFGLNFQGEYLIYQPGAAFEAFTGSFTLALFVVVFVKKMTR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32423; Mature: 32292
Theoretical pI: Translated: 8.40; Mature: 8.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAMCRYLVADGRHCSEEAGEHELCRWHDPHADHQAPQTAHELEHYIHQGGLCHGLQLARA CCHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHH NLAGLNLVKKGAPQGFLLEQCNFYRANLQGAHLYGIRIKGGSLMKADLSDANLHCAELDN HHHHHHHHHCCCCCCHHHHHCCHHCCCCCCEEEEEEEECCCCEEEECCCCCCEEEEECCC VNLLGIRWHNTRLDNLNTGKRLMQERRGRSERDPAQARIWFKEAEETYRDLRKASEAQGI CEEEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCE FTMSGRYIQRELTMRRLQLPLWSIQRFTSWIVDLFCGYGEAPMRVVLFSLLLIFICSIFY EEECCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH FFFGLNFQGEYLIYQPGAAFEAFTGSFTLALFVVVFVKKMTR HHHCCCCCCCEEEECCCCCHHHHCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure AMCRYLVADGRHCSEEAGEHELCRWHDPHADHQAPQTAHELEHYIHQGGLCHGLQLARA CHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHH NLAGLNLVKKGAPQGFLLEQCNFYRANLQGAHLYGIRIKGGSLMKADLSDANLHCAELDN HHHHHHHHHCCCCCCHHHHHCCHHCCCCCCEEEEEEEECCCCEEEECCCCCCEEEEECCC VNLLGIRWHNTRLDNLNTGKRLMQERRGRSERDPAQARIWFKEAEETYRDLRKASEAQGI CEEEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCE FTMSGRYIQRELTMRRLQLPLWSIQRFTSWIVDLFCGYGEAPMRVVLFSLLLIFICSIFY EEECCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH FFFGLNFQGEYLIYQPGAAFEAFTGSFTLALFVVVFVKKMTR HHHCCCCCCCEEEECCCCCHHHHCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA