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The map label for this gene is dsdX [H]

Identifier: 145299850

GI number: 145299850

Start: 3158978

End: 3160315

Strand: Direct

Name: dsdX [H]

Synonym: ASA_2939

Alternate gene names: 145299850

Gene position: 3158978-3160315 (Clockwise)

Preceding gene: 145299848

Following gene: 145299851

Centisome position: 67.18

GC content: 60.61

Gene sequence:

>1338_bases
ATGAATTCTGAAGTGTGGGTCGTCGGTACCTTGCTGACTAGCATCATTCTGATTGTCTTCACCATAGTGAAGGGCAAGGT
ACATCCTTTCCTGGCTTTGCTGCTGGCGAGCTTCTATGTGGGCACCATGATGGGGATGAACCCGGTCAAGATGGTCAACG
CCATGGAGGAAGGCATAGGCGGCACCCTGGGCTTTCTCGCCGCCGTCATCGGCCTTGGCACCATACTCGGCAAGATGATG
GAAGTATCGGGGGCGGCGGAACGTATCGGTCTCGCCCTGCAAAAGTGCCGCTGGCTCTCGCCTCAGGTGATCATGGTGCT
GGTCGGTCTGGTGTGCGGCATCACGTTGTTTGTCGAAGTGGGAGTCGTGCTGCTCATTCCCCTTGCCTTCTCCATCGCCC
GCAAGACCAGAACCTCGCTGCTGACCCTGGCCATCCCACTCTGCACCGCCCTGATGGCCGTGCACTGCATAGTGCCGCCC
CACCCGGCCGCGCTCTACGTCACCAATCAGCTGGGTGCCGACATAGGTTCCGTCATCGTCTATGGCCTCGCGGTCGGGCT
GTTTGCCTCCCTGGTGGGCGGCCCGCTGTTTTTGAAGCTGCTTGGTAAACGGGTGCCGTTCAAGGAGGTACCCGCCGCCT
TTGCGAATATAGAGGCGCGCGATGAGGTGACCCTCCCGACCTTGGGCGCCTCCCTCTTCACCGTGCTGCTGCCCATACTA
CTGATGCTGGCCAAGACGGTGGCCGAGCTCAACATGGATCACGCAAGCGGCCTCTATACCCTGCTGGAGTTCATCGGCAA
CCCCATCACCGCCATGTTTATCGCCGCCTTCACCGCCTACTACGTGCTGGGGATCCGTCAGCACATGAAGATGGAAGGGC
TGCTGAACCAGACCGAGCAGTGCTTCTCCTCCATCGCCAATATCCTGCTGATCATAGGGGCAGGTGGCGCCTTCAACGGC
GTGCTCAAGGCGAGCGGCCTGGGGGACAGCCTGGCGACCATCCTCTCCCAGCTGGACATGCACCCTATCCTGCTGGCCTG
GCTGGTGGCCATAGTGCTGCACGCAGCCGTAGGCTCGGCCACGGTCGCCATGATGGGGGCCACTGCCATCGTCTCCCCCA
TCATGGTGCACTACCCCGAGATAAGCCCCGAGATCATGACGCTCGCCATCGGCTCTGGCGCCATTGGCTGCACCATGGTG
ACCGACTCCCTGTTCTGGCTGGTCAAGCAGTATTGCGGCGCCACCCTGAACGAAACGCTCAAGTACTACACTACCGCCAC
CTTTGTCGCCTCCCTGATGGCGCTGGCCGGTACTTTCCTGCTCTCCTATATCGTGTAA

Upstream 100 bases:

>100_bases
ACCTGGATCATCCAAGACGCCATTTTCATCATTTGTCAGCCGCCCGTCATTTTCATTCAATAGGCGCCTAATCATCACTC
ATGACACATAGAGGCGCAGT

Downstream 100 bases:

>100_bases
CAAGACCGAGAACCCTATGAAAAACATCGACGTACAACAGCTCACCAACCAATTCCCGCTGGTACAATCCCTGATCGCGC
TCGAGCCCGTGACCTGGTTC

Product: permease DsdX

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 445; Mature: 445

Protein sequence:

>445_residues
MNSEVWVVGTLLTSIILIVFTIVKGKVHPFLALLLASFYVGTMMGMNPVKMVNAMEEGIGGTLGFLAAVIGLGTILGKMM
EVSGAAERIGLALQKCRWLSPQVIMVLVGLVCGITLFVEVGVVLLIPLAFSIARKTRTSLLTLAIPLCTALMAVHCIVPP
HPAALYVTNQLGADIGSVIVYGLAVGLFASLVGGPLFLKLLGKRVPFKEVPAAFANIEARDEVTLPTLGASLFTVLLPIL
LMLAKTVAELNMDHASGLYTLLEFIGNPITAMFIAAFTAYYVLGIRQHMKMEGLLNQTEQCFSSIANILLIIGAGGAFNG
VLKASGLGDSLATILSQLDMHPILLAWLVAIVLHAAVGSATVAMMGATAIVSPIMVHYPEISPEIMTLAIGSGAIGCTMV
TDSLFWLVKQYCGATLNETLKYYTTATFVASLMALAGTFLLSYIV

Sequences:

>Translated_445_residues
MNSEVWVVGTLLTSIILIVFTIVKGKVHPFLALLLASFYVGTMMGMNPVKMVNAMEEGIGGTLGFLAAVIGLGTILGKMM
EVSGAAERIGLALQKCRWLSPQVIMVLVGLVCGITLFVEVGVVLLIPLAFSIARKTRTSLLTLAIPLCTALMAVHCIVPP
HPAALYVTNQLGADIGSVIVYGLAVGLFASLVGGPLFLKLLGKRVPFKEVPAAFANIEARDEVTLPTLGASLFTVLLPIL
LMLAKTVAELNMDHASGLYTLLEFIGNPITAMFIAAFTAYYVLGIRQHMKMEGLLNQTEQCFSSIANILLIIGAGGAFNG
VLKASGLGDSLATILSQLDMHPILLAWLVAIVLHAAVGSATVAMMGATAIVSPIMVHYPEISPEIMTLAIGSGAIGCTMV
TDSLFWLVKQYCGATLNETLKYYTTATFVASLMALAGTFLLSYIV
>Mature_445_residues
MNSEVWVVGTLLTSIILIVFTIVKGKVHPFLALLLASFYVGTMMGMNPVKMVNAMEEGIGGTLGFLAAVIGLGTILGKMM
EVSGAAERIGLALQKCRWLSPQVIMVLVGLVCGITLFVEVGVVLLIPLAFSIARKTRTSLLTLAIPLCTALMAVHCIVPP
HPAALYVTNQLGADIGSVIVYGLAVGLFASLVGGPLFLKLLGKRVPFKEVPAAFANIEARDEVTLPTLGASLFTVLLPIL
LMLAKTVAELNMDHASGLYTLLEFIGNPITAMFIAAFTAYYVLGIRQHMKMEGLLNQTEQCFSSIANILLIIGAGGAFNG
VLKASGLGDSLATILSQLDMHPILLAWLVAIVLHAAVGSATVAMMGATAIVSPIMVHYPEISPEIMTLAIGSGAIGCTMV
TDSLFWLVKQYCGATLNETLKYYTTATFVASLMALAGTFLLSYIV

Specific function: Probable permease for an unknown substrate [H]

COG id: COG2610

COG function: function code GE; H+/gluconate symporter and related permeases

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gntP permease family [H]

Homologues:

Organism=Escherichia coli, GI1788707, Length=445, Percent_Identity=79.7752808988764, Blast_Score=716, Evalue=0.0,
Organism=Escherichia coli, GI48994935, Length=432, Percent_Identity=34.4907407407407, Blast_Score=251, Evalue=5e-68,
Organism=Escherichia coli, GI1790716, Length=418, Percent_Identity=35.1674641148325, Blast_Score=249, Evalue=3e-67,
Organism=Escherichia coli, GI2367370, Length=426, Percent_Identity=34.5070422535211, Blast_Score=226, Evalue=2e-60,
Organism=Escherichia coli, GI1790776, Length=429, Percent_Identity=31.002331002331, Blast_Score=219, Evalue=3e-58,
Organism=Escherichia coli, GI48994939, Length=418, Percent_Identity=35.4066985645933, Blast_Score=212, Evalue=4e-56,
Organism=Escherichia coli, GI1789097, Length=447, Percent_Identity=30.4250559284116, Blast_Score=179, Evalue=4e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003474 [H]

Pfam domain/function: PF02447 GntP_permease [H]

EC number: NA

Molecular weight: Translated: 47008; Mature: 47008

Theoretical pI: Translated: 7.19; Mature: 7.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSEVWVVGTLLTSIILIVFTIVKGKVHPFLALLLASFYVGTMMGMNPVKMVNAMEEGIG
CCCCEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCC
GTLGFLAAVIGLGTILGKMMEVSGAAERIGLALQKCRWLSPQVIMVLVGLVCGITLFVEV
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
GVVLLIPLAFSIARKTRTSLLTLAIPLCTALMAVHCIVPPHPAALYVTNQLGADIGSVIV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHCCHHHHHHH
YGLAVGLFASLVGGPLFLKLLGKRVPFKEVPAAFANIEARDEVTLPTLGASLFTVLLPIL
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
LMLAKTVAELNMDHASGLYTLLEFIGNPITAMFIAAFTAYYVLGIRQHMKMEGLLNQTEQ
HHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CFSSIANILLIIGAGGAFNGVLKASGLGDSLATILSQLDMHPILLAWLVAIVLHAAVGSA
HHHHHHHHHHHCCCCCHHCCHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
TVAMMGATAIVSPIMVHYPEISPEIMTLAIGSGAIGCTMVTDSLFWLVKQYCGATLNETL
HHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHH
KYYTTATFVASLMALAGTFLLSYIV
HHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MNSEVWVVGTLLTSIILIVFTIVKGKVHPFLALLLASFYVGTMMGMNPVKMVNAMEEGIG
CCCCEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCC
GTLGFLAAVIGLGTILGKMMEVSGAAERIGLALQKCRWLSPQVIMVLVGLVCGITLFVEV
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
GVVLLIPLAFSIARKTRTSLLTLAIPLCTALMAVHCIVPPHPAALYVTNQLGADIGSVIV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHCCHHHHHHH
YGLAVGLFASLVGGPLFLKLLGKRVPFKEVPAAFANIEARDEVTLPTLGASLFTVLLPIL
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
LMLAKTVAELNMDHASGLYTLLEFIGNPITAMFIAAFTAYYVLGIRQHMKMEGLLNQTEQ
HHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CFSSIANILLIIGAGGAFNGVLKASGLGDSLATILSQLDMHPILLAWLVAIVLHAAVGSA
HHHHHHHHHHHCCCCCHHCCHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
TVAMMGATAIVSPIMVHYPEISPEIMTLAIGSGAIGCTMVTDSLFWLVKQYCGATLNETL
HHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHH
KYYTTATFVASLMALAGTFLLSYIV
HHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7592420; 3275618; 9205837; 9278503; 3029015; 1659648; 12218016 [H]