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The map label for this gene is yraR [H]

Identifier: 145299833

GI number: 145299833

Start: 3143452

End: 3144087

Strand: Direct

Name: yraR [H]

Synonym: ASA_2919

Alternate gene names: 145299833

Gene position: 3143452-3144087 (Clockwise)

Preceding gene: 145299832

Following gene: 145299836

Centisome position: 66.85

GC content: 64.15

Gene sequence:

>636_bases
ATGAGCCAGATCCTGATTGCCGGTGCCAGCGGACTGATCGGCACAGCCCTTGTCCGCCAAGTCGATCCCGCTCACTCACT
GACCCTGCTCTGTCGCAAGGCGGGTGCTCCCCAGCCCCGGCATCACTGGCTGCCAGCCGACTTCGAACAACTGGCGGATC
TGGACCTGCCCTCCCCTGTCGATATCGCCTTCTGCTGCCTGGGCACCACCCGCAAGCAGGCAGGCTCTGACGACGCATTT
CGTCGGGTCGACCACGACTATGTGCTGGCTTTTGCCAAGCTCGCTCGCCGCCACGGCTGTCAACGCCTTATCGTCGTCTC
GAGTCTGGGAGCCAACCCACGCTCACTGGCCCTCTATCCCCGCACCAAGGGGCAGATGGAACAGGCCTTGCTGGCACAAT
CCTGGCAACGGCTTGCCATAGTCCGCCCCGCCATGCTGCTCGGCAACCGCCAGCCGCCACGCCGTTCCGAGCAATTTTTT
CAGGCACTCTATCCGCTACTGCGTCCCCTGCTCATCGGCAAGCTGCGCCGCTGGCGCGCCATCGACGCCAGACAGGTCGC
CCACGCCATGATAGTGCTCGGCCAGCAGGAGAGTGGCGTCGAGGTGGTGGAAAACGAACGCCTGCTCGCCACGTAA

Upstream 100 bases:

>100_bases
GACTTCCCGTTACCAGCGGCCTTCCACACCCCGCTCTGATCGCATTCACAAAACCGGCCCAGCGCCGGTTTTGTTTTATC
TCGTTCACAAGGAGTGCTTG

Downstream 100 bases:

>100_bases
CCTCTTCGCCCTCTGGCGGGGACGATTTAAAGAACTCGCCAACCCGACAGCAGTACGGTCGGCAAAAAACAAAAAGGCGC
CCAGGCGCCTTTTGTGATCA

Product: nucleoside-diphosphate-sugar epimerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 211; Mature: 210

Protein sequence:

>211_residues
MSQILIAGASGLIGTALVRQVDPAHSLTLLCRKAGAPQPRHHWLPADFEQLADLDLPSPVDIAFCCLGTTRKQAGSDDAF
RRVDHDYVLAFAKLARRHGCQRLIVVSSLGANPRSLALYPRTKGQMEQALLAQSWQRLAIVRPAMLLGNRQPPRRSEQFF
QALYPLLRPLLIGKLRRWRAIDARQVAHAMIVLGQQESGVEVVENERLLAT

Sequences:

>Translated_211_residues
MSQILIAGASGLIGTALVRQVDPAHSLTLLCRKAGAPQPRHHWLPADFEQLADLDLPSPVDIAFCCLGTTRKQAGSDDAF
RRVDHDYVLAFAKLARRHGCQRLIVVSSLGANPRSLALYPRTKGQMEQALLAQSWQRLAIVRPAMLLGNRQPPRRSEQFF
QALYPLLRPLLIGKLRRWRAIDARQVAHAMIVLGQQESGVEVVENERLLAT
>Mature_210_residues
SQILIAGASGLIGTALVRQVDPAHSLTLLCRKAGAPQPRHHWLPADFEQLADLDLPSPVDIAFCCLGTTRKQAGSDDAFR
RVDHDYVLAFAKLARRHGCQRLIVVSSLGANPRSLALYPRTKGQMEQALLAQSWQRLAIVRPAMLLGNRQPPRRSEQFFQ
ALYPLLRPLLIGKLRRWRAIDARQVAHAMIVLGQQESGVEVVENERLLAT

Specific function: Unknown

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To yeast YER004W [H]

Homologues:

Organism=Homo sapiens, GI148728172, Length=172, Percent_Identity=35.4651162790698, Blast_Score=95, Evalue=6e-20,
Organism=Homo sapiens, GI148728168, Length=172, Percent_Identity=35.4651162790698, Blast_Score=95, Evalue=6e-20,
Organism=Homo sapiens, GI148728164, Length=172, Percent_Identity=35.4651162790698, Blast_Score=95, Evalue=6e-20,
Organism=Homo sapiens, GI148728166, Length=172, Percent_Identity=35.4651162790698, Blast_Score=93, Evalue=1e-19,
Organism=Escherichia coli, GI87082218, Length=218, Percent_Identity=39.4495412844037, Blast_Score=145, Evalue=3e-36,
Organism=Caenorhabditis elegans, GI71983631, Length=216, Percent_Identity=32.4074074074074, Blast_Score=118, Evalue=3e-27,
Organism=Saccharomyces cerevisiae, GI6320840, Length=161, Percent_Identity=32.9192546583851, Blast_Score=65, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000534 [H]

Pfam domain/function: PF01118 Semialdhyde_dh [H]

EC number: NA

Molecular weight: Translated: 23466; Mature: 23334

Theoretical pI: Translated: 10.72; Mature: 10.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQILIAGASGLIGTALVRQVDPAHSLTLLCRKAGAPQPRHHWLPADFEQLADLDLPSPV
CCCEEEECCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCCC
DIAFCCLGTTRKQAGSDDAFRRVDHDYVLAFAKLARRHGCQRLIVVSSLGANPRSLALYP
CHHEEECCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEECC
RTKGQMEQALLAQSWQRLAIVRPAMLLGNRQPPRRSEQFFQALYPLLRPLLIGKLRRWRA
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
IDARQVAHAMIVLGQQESGVEVVENERLLAT
HHHHHHHHHHHHCCCCCCCCEECCCCCCCCC
>Mature Secondary Structure 
SQILIAGASGLIGTALVRQVDPAHSLTLLCRKAGAPQPRHHWLPADFEQLADLDLPSPV
CCEEEECCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCCC
DIAFCCLGTTRKQAGSDDAFRRVDHDYVLAFAKLARRHGCQRLIVVSSLGANPRSLALYP
CHHEEECCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEECC
RTKGQMEQALLAQSWQRLAIVRPAMLLGNRQPPRRSEQFFQALYPLLRPLLIGKLRRWRA
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
IDARQVAHAMIVLGQQESGVEVVENERLLAT
HHHHHHHHHHHHCCCCCCCCEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]