Click here to switch to the map view.

The map label for this gene is cmoB [H]

Identifier: 145299767

GI number: 145299767

Start: 3066600

End: 3067577

Strand: Direct

Name: cmoB [H]

Synonym: ASA_2847

Alternate gene names: 145299767

Gene position: 3066600-3067577 (Clockwise)

Preceding gene: 145299766

Following gene: 145299768

Centisome position: 65.21

GC content: 60.02

Gene sequence:

>978_bases
ATGATCGACTTTGCCAATTTTTATCAACTGATCGCCAAGAACCGGCTGAGCCACTGGTTGCATACCCTGCCCGCTCAGCT
GCATGCCTGGCAGCACGACAACCTGCATGGGGACCTGCCGCGCTGGAATCGCGCCCTCAACAAGCTGCCCACCACAGCGC
CCGGCCATATCGAGCTGCAACGGGGCGTCGAGATAGGCAATAGCCAGAGCTTGAGTGAAGGGGAGCGCAAAAAAGTCGAG
AGTCTGCTGCGCCAATTCATGCCCTGGCGCAAGGGGCCCTTCACGGTCCACGGCATCCACATCGATACCGAGTGGCGCTC
CGACTGGAAGTGGGATCGTGTATTGCCCCACATCAGCCCGCTGGCTGGCCGCTATGTGCTGGATGTGGGCTGCGGCAGCG
GCTATCACCTCTGGCGTATGGTCGGCGAAGGAGCCAAACTGGCCGTCGGCATAGACCCGAGCCCGCTGTTCTTGTGCCAG
TTCGAGGCCATTCGTCACTTCACCGGCGGCGATCAGCGCGCTCACCTGTTGCCGCTGGGCATTCAGGAGCTGCCTGACCT
GCGCGCCTTTGACACCGTCTTCTCCATGGGGGTGCTCTATCACCGCAAGTCCCCCATAGAGCACATAGAACAGTTGCGTA
ACCAGCTGAAAGACGATGGCGAGCTGGTGCTGGAGACCCTGGTTGTCGACGGCGGCGTCAATGAGGTGCTGGTGCCCACC
GACCGTTACGGCAAGATGCGCAACGTCTGGTTCATCCCCTCAAGCGCAGCCCTCAAACTCTGGGTGGAGCGCTGCGGATT
TACCGATGTGCGGATCGTAGACGAGAATATGACCAGCACCGACGAACAGCGTCGTACCGACTGGATGATTAATGAATCCC
TGAGCGATTATCTGGATCCTGCGGATCCCGCGCTCACGGTAGAAGGACACCCGGCGCCGAAACGTGCCGTACTGATTGCC
AGAAAGGCCAAAGACTAG

Upstream 100 bases:

>100_bases
CCGCCTGCAAAGCGCCGGCTTCGTTCATCAGGATCTCTGGTTCCAATGTTTCAACTTCGGTTCCATGATTGCCATCAAAT
CCAGCGACGCCAACTAAGCC

Downstream 100 bases:

>100_bases
CCGATGGCGCCAGCGGAAGTTACACTGACCCAATTCCAGGAAGCACAGTTAAATGAATGACATGAAAAGCAAATTAAAAG
GAATGACCCTGCTCTCCCTG

Product: methyltransferase, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 325; Mature: 325

Protein sequence:

>325_residues
MIDFANFYQLIAKNRLSHWLHTLPAQLHAWQHDNLHGDLPRWNRALNKLPTTAPGHIELQRGVEIGNSQSLSEGERKKVE
SLLRQFMPWRKGPFTVHGIHIDTEWRSDWKWDRVLPHISPLAGRYVLDVGCGSGYHLWRMVGEGAKLAVGIDPSPLFLCQ
FEAIRHFTGGDQRAHLLPLGIQELPDLRAFDTVFSMGVLYHRKSPIEHIEQLRNQLKDDGELVLETLVVDGGVNEVLVPT
DRYGKMRNVWFIPSSAALKLWVERCGFTDVRIVDENMTSTDEQRRTDWMINESLSDYLDPADPALTVEGHPAPKRAVLIA
RKAKD

Sequences:

>Translated_325_residues
MIDFANFYQLIAKNRLSHWLHTLPAQLHAWQHDNLHGDLPRWNRALNKLPTTAPGHIELQRGVEIGNSQSLSEGERKKVE
SLLRQFMPWRKGPFTVHGIHIDTEWRSDWKWDRVLPHISPLAGRYVLDVGCGSGYHLWRMVGEGAKLAVGIDPSPLFLCQ
FEAIRHFTGGDQRAHLLPLGIQELPDLRAFDTVFSMGVLYHRKSPIEHIEQLRNQLKDDGELVLETLVVDGGVNEVLVPT
DRYGKMRNVWFIPSSAALKLWVERCGFTDVRIVDENMTSTDEQRRTDWMINESLSDYLDPADPALTVEGHPAPKRAVLIA
RKAKD
>Mature_325_residues
MIDFANFYQLIAKNRLSHWLHTLPAQLHAWQHDNLHGDLPRWNRALNKLPTTAPGHIELQRGVEIGNSQSLSEGERKKVE
SLLRQFMPWRKGPFTVHGIHIDTEWRSDWKWDRVLPHISPLAGRYVLDVGCGSGYHLWRMVGEGAKLAVGIDPSPLFLCQ
FEAIRHFTGGDQRAHLLPLGIQELPDLRAFDTVFSMGVLYHRKSPIEHIEQLRNQLKDDGELVLETLVVDGGVNEVLVPT
DRYGKMRNVWFIPSSAALKLWVERCGFTDVRIVDENMTSTDEQRRTDWMINESLSDYLDPADPALTVEGHPAPKRAVLIA
RKAKD

Specific function: Catalyzes the conversion of 5-hydroxyuridine (ho5U) to 5-methoxyuridine (mo5U) at position 34 in tRNA [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. CmoB family [H]

Homologues:

Organism=Escherichia coli, GI1788178, Length=322, Percent_Identity=65.527950310559, Blast_Score=462, Evalue=1e-131,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010017 [H]

Pfam domain/function: PF08003 Methyltransf_9 [H]

EC number: NA

Molecular weight: Translated: 37122; Mature: 37122

Theoretical pI: Translated: 6.93; Mature: 6.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDFANFYQLIAKNRLSHWLHTLPAQLHAWQHDNLHGDLPRWNRALNKLPTTAPGHIELQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEE
RGVEIGNSQSLSEGERKKVESLLRQFMPWRKGPFTVHGIHIDTEWRSDWKWDRVLPHISP
CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCHHHHCCCCCC
LAGRYVLDVGCGSGYHLWRMVGEGAKLAVGIDPSPLFLCQFEAIRHFTGGDQRAHLLPLG
CCCCEEEEECCCCCHHHHHHHCCCCEEEEECCCCCEEEEEHHHHHHHCCCCCCEEEEECC
IQELPDLRAFDTVFSMGVLYHRKSPIEHIEQLRNQLKDDGELVLETLVVDGGVNEVLVPT
HHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEECC
DRYGKMRNVWFIPSSAALKLWVERCGFTDVRIVDENMTSTDEQRRTDWMINESLSDYLDP
CCCCCCCEEEECCCHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCC
ADPALTVEGHPAPKRAVLIARKAKD
CCCEEEECCCCCCCEEEEEEECCCC
>Mature Secondary Structure
MIDFANFYQLIAKNRLSHWLHTLPAQLHAWQHDNLHGDLPRWNRALNKLPTTAPGHIELQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEE
RGVEIGNSQSLSEGERKKVESLLRQFMPWRKGPFTVHGIHIDTEWRSDWKWDRVLPHISP
CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCHHHHCCCCCC
LAGRYVLDVGCGSGYHLWRMVGEGAKLAVGIDPSPLFLCQFEAIRHFTGGDQRAHLLPLG
CCCCEEEEECCCCCHHHHHHHCCCCEEEEECCCCCEEEEEHHHHHHHCCCCCCEEEEECC
IQELPDLRAFDTVFSMGVLYHRKSPIEHIEQLRNQLKDDGELVLETLVVDGGVNEVLVPT
HHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEECC
DRYGKMRNVWFIPSSAALKLWVERCGFTDVRIVDENMTSTDEQRRTDWMINESLSDYLDP
CCCCCCCEEEECCCHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCC
ADPALTVEGHPAPKRAVLIARKAKD
CCCEEEECCCCCCCEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA