Definition | Corynebacterium glutamicum R chromosome, complete genome. |
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Accession | NC_009342 |
Length | 3,314,179 |
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The map label for this gene is uxuB [H]
Identifier: 145296484
GI number: 145296484
Start: 2632172
End: 2633524
Strand: Direct
Name: uxuB [H]
Synonym: cgR_2395
Alternate gene names: 145296484
Gene position: 2632172-2633524 (Clockwise)
Preceding gene: 145296483
Following gene: 145296485
Centisome position: 79.42
GC content: 57.43
Gene sequence:
>1353_bases ATGAGCACGCCGCTAAATCGCAAGAACGCTTCCTGCCCGGACGCGCCCCCTGTTCGCCTAGTTCACCTAGGCCTTGGCGC TTTCCACCGCGCACACCAGGTCTGGTACACCCAAAAAGCTGATCCAACCTGGGGTTATGCATCCTTTACTGGCCGCAGTG CCCGCATGTCTGATGCGTTAACTCCACAGGATGGCCTGTACACCTTGGTGACTCGTTCTGGTGAAGGCGATTCACCTGAA CTAATTTCTTCCCTCGTTGAGGCCCAACCTGCAGCGAACGTGGAACGCCTCGTTGAGTTGATGGCAGATCCGCAGGTTGC TGTGGTTACTTTGACCATCACTGAGGCTGGCTATCACTTGGCTGCAGATGGCTCTTTGGATGAAGCCCACGAAGATGTCG CTTCTGACTTGGAAGCACTTGCGGGAGACTCTTTAGAGTTGAAGACCGCCGCTGGCAAGTTGGTCAAGGGCTTGGCTGCA CGTAAGACTGCTGAAGCTGGCGGAATTGCCATCATGAGCTGCGACAACATTGCAGACAACGGTGCGCTAACCTCCGGTGC AGTTCTTGGCCTTGCCGCAAAGGTCTCCCCTGAATTGGCAGCGTGGGTCAAGGACAACGTCACCTTCCCATCCACCTCCA TCGACCGCATTACCCCAGCTACTGAGGATTCCTTGATCGCGGACGTGGAAGCCCAGACCGGTTTCCACGACAACGCCCCT GTTGTCACCGAACCTTTCGCTTCTTGGATCATCGAAGGTGAATTCCCTGCTGGCCGCCCTAATTGGGAGAACGCTGGCGT GGAATTCGTCTCCGATATTGAGCAGTTTGAGCGTCGCAAGCTGTGGCTCCTCAACGGCTCACACTCCCTGATGGCGTACT TCGGCCAGCTGCGCGGACACGCAACCGTTGCCGATGCAATCAACGATTCTGTCGTGCGTTCCCACGTGGAAGCCCTCTGG GATGAGGCAGCAAATCACCTCACAGCCGAAGGCCTCAACGTCCCTGGTTACCGCCAGAGCCTGATCGAGCGTTTCGAAAA CCCTCGCATCGTGCACAACTTGGCGCAGATCGCCATCGACGGCGCAACCAAGCAGCGCATGCGCGCGGTCCCAATCCTCA AGGCCGAACTCGCAGCCGGCCGCCCCGGAAACGGTGCCGCGCTGTCGATCGCGGCGTGGATCGCCTACGTCCTAGGCACC GAGGAAGTCCGCGACACCCGCTCAGCGGAAATCAACGAGGCAAAATTGCTTGACGACGCGATCCTCGGCCTCATCACTGT TCTCGACGAAGACCTCGCCACCAATGATGCAATCGTTACACACATTAAGAAAGTTGTTTCCGAACTTTCTTAG
Upstream 100 bases:
>100_bases ACCTGGCACGTCTTGTTGCAGAGCACCGCATCACCGAAAGCCGCGCCGCTGAAATCATCGTGGATCTCATCGATGCTTCC CCAAGAAGGGTCTTCAAACT
Downstream 100 bases:
>100_bases AACCCATCAGTTTTAACAGTGCCACCTGCCGGCCAGCCTTTATTTGTTTAGTCTCCGGAACTTGGCACTAATTTAGATAC CTGGAGATTTTTCGTGACTA
Product: hypothetical protein
Products: NA
Alternate protein names: Fructuronate reductase [H]
Number of amino acids: Translated: 450; Mature: 449
Protein sequence:
>450_residues MSTPLNRKNASCPDAPPVRLVHLGLGAFHRAHQVWYTQKADPTWGYASFTGRSARMSDALTPQDGLYTLVTRSGEGDSPE LISSLVEAQPAANVERLVELMADPQVAVVTLTITEAGYHLAADGSLDEAHEDVASDLEALAGDSLELKTAAGKLVKGLAA RKTAEAGGIAIMSCDNIADNGALTSGAVLGLAAKVSPELAAWVKDNVTFPSTSIDRITPATEDSLIADVEAQTGFHDNAP VVTEPFASWIIEGEFPAGRPNWENAGVEFVSDIEQFERRKLWLLNGSHSLMAYFGQLRGHATVADAINDSVVRSHVEALW DEAANHLTAEGLNVPGYRQSLIERFENPRIVHNLAQIAIDGATKQRMRAVPILKAELAAGRPGNGAALSIAAWIAYVLGT EEVRDTRSAEINEAKLLDDAILGLITVLDEDLATNDAIVTHIKKVVSELS
Sequences:
>Translated_450_residues MSTPLNRKNASCPDAPPVRLVHLGLGAFHRAHQVWYTQKADPTWGYASFTGRSARMSDALTPQDGLYTLVTRSGEGDSPE LISSLVEAQPAANVERLVELMADPQVAVVTLTITEAGYHLAADGSLDEAHEDVASDLEALAGDSLELKTAAGKLVKGLAA RKTAEAGGIAIMSCDNIADNGALTSGAVLGLAAKVSPELAAWVKDNVTFPSTSIDRITPATEDSLIADVEAQTGFHDNAP VVTEPFASWIIEGEFPAGRPNWENAGVEFVSDIEQFERRKLWLLNGSHSLMAYFGQLRGHATVADAINDSVVRSHVEALW DEAANHLTAEGLNVPGYRQSLIERFENPRIVHNLAQIAIDGATKQRMRAVPILKAELAAGRPGNGAALSIAAWIAYVLGT EEVRDTRSAEINEAKLLDDAILGLITVLDEDLATNDAIVTHIKKVVSELS >Mature_449_residues STPLNRKNASCPDAPPVRLVHLGLGAFHRAHQVWYTQKADPTWGYASFTGRSARMSDALTPQDGLYTLVTRSGEGDSPEL ISSLVEAQPAANVERLVELMADPQVAVVTLTITEAGYHLAADGSLDEAHEDVASDLEALAGDSLELKTAAGKLVKGLAAR KTAEAGGIAIMSCDNIADNGALTSGAVLGLAAKVSPELAAWVKDNVTFPSTSIDRITPATEDSLIADVEAQTGFHDNAPV VTEPFASWIIEGEFPAGRPNWENAGVEFVSDIEQFERRKLWLLNGSHSLMAYFGQLRGHATVADAINDSVVRSHVEALWD EAANHLTAEGLNVPGYRQSLIERFENPRIVHNLAQIAIDGATKQRMRAVPILKAELAAGRPGNGAALSIAAWIAYVLGTE EVRDTRSAEINEAKLLDDAILGLITVLDEDLATNDAIVTHIKKVVSELS
Specific function: Hexuronate conversion to KDG. [C]
COG id: COG0246
COG function: function code G; Mannitol-1-phosphate/altronate dehydrogenases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mannitol dehydrogenase family. UxuB subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790779, Length=456, Percent_Identity=37.0614035087719, Blast_Score=271, Evalue=5e-74, Organism=Escherichia coli, GI1788497, Length=456, Percent_Identity=36.1842105263158, Blast_Score=265, Evalue=3e-72, Organism=Escherichia coli, GI1787823, Length=394, Percent_Identity=39.5939086294416, Blast_Score=265, Evalue=5e-72, Organism=Escherichia coli, GI48994885, Length=423, Percent_Identity=28.3687943262411, Blast_Score=115, Evalue=8e-27, Organism=Escherichia coli, GI1790028, Length=231, Percent_Identity=29.8701298701299, Blast_Score=91, Evalue=1e-19, Organism=Saccharomyces cerevisiae, GI6324401, Length=398, Percent_Identity=33.1658291457286, Blast_Score=214, Evalue=3e-56, Organism=Saccharomyces cerevisiae, GI6320765, Length=398, Percent_Identity=33.1658291457286, Blast_Score=214, Evalue=3e-56,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR013328 - InterPro: IPR000669 - InterPro: IPR013118 - InterPro: IPR023027 - InterPro: IPR013131 - InterPro: IPR016040 [H]
Pfam domain/function: PF01232 Mannitol_dh; PF08125 Mannitol_dh_C [H]
EC number: =1.1.1.57 [H]
Molecular weight: Translated: 48059; Mature: 47928
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTPLNRKNASCPDAPPVRLVHLGLGAFHRAHQVWYTQKADPTWGYASFTGRSARMSDAL CCCCCCCCCCCCCCCCCEEEEEECHHHHHHHHHHEEECCCCCCCCCCCCCCCCCHHCCCC TPQDGLYTLVTRSGEGDSPELISSLVEAQPAANVERLVELMADPQVAVVTLTITEAGYHL CCCCCEEEEEEECCCCCCHHHHHHHHHCCCCCCHHHHHHHHCCCCEEEEEEEEECCCEEE AADGSLDEAHEDVASDLEALAGDSLELKTAAGKLVKGLAARKTAEAGGIAIMSCDNIADN EECCCHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCC GALTSGAVLGLAAKVSPELAAWVKDNVTFPSTSIDRITPATEDSLIADVEAQTGFHDNAP CCCCCCHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECHHHCCCCCCCC VVTEPFASWIIEGEFPAGRPNWENAGVEFVSDIEQFERRKLWLLNGSHSLMAYFGQLRGH CEECCHHHHEEECCCCCCCCCCCCCCHHHHHHHHHHHHCEEEEEECCHHHHHHHHHHCCC ATVADAINDSVVRSHVEALWDEAANHLTAEGLNVPGYRQSLIERFENPRIVHNLAQIAID CHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHC GATKQRMRAVPILKAELAAGRPGNGAALSIAAWIAYVLGTEEVRDTRSAEINEAKLLDDA CHHHHHHHHCCHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHH ILGLITVLDEDLATNDAIVTHIKKVVSELS HHHHHHHHHHHHCCCHHHHHHHHHHHHHCC >Mature Secondary Structure STPLNRKNASCPDAPPVRLVHLGLGAFHRAHQVWYTQKADPTWGYASFTGRSARMSDAL CCCCCCCCCCCCCCCCEEEEEECHHHHHHHHHHEEECCCCCCCCCCCCCCCCCHHCCCC TPQDGLYTLVTRSGEGDSPELISSLVEAQPAANVERLVELMADPQVAVVTLTITEAGYHL CCCCCEEEEEEECCCCCCHHHHHHHHHCCCCCCHHHHHHHHCCCCEEEEEEEEECCCEEE AADGSLDEAHEDVASDLEALAGDSLELKTAAGKLVKGLAARKTAEAGGIAIMSCDNIADN EECCCHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCC GALTSGAVLGLAAKVSPELAAWVKDNVTFPSTSIDRITPATEDSLIADVEAQTGFHDNAP CCCCCCHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECHHHCCCCCCCC VVTEPFASWIIEGEFPAGRPNWENAGVEFVSDIEQFERRKLWLLNGSHSLMAYFGQLRGH CEECCHHHHEEECCCCCCCCCCCCCCHHHHHHHHHHHHCEEEEEECCHHHHHHHHHHCCC ATVADAINDSVVRSHVEALWDEAANHLTAEGLNVPGYRQSLIERFENPRIVHNLAQIAID CHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHC GATKQRMRAVPILKAELAAGRPGNGAALSIAAWIAYVLGTEEVRDTRSAEINEAKLLDDA CHHHHHHHHCCHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHH ILGLITVLDEDLATNDAIVTHIKKVVSELS HHHHHHHHHHHHCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503 [H]