Definition | Corynebacterium glutamicum R chromosome, complete genome. |
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Accession | NC_009342 |
Length | 3,314,179 |
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The map label for this gene is yvyE [H]
Identifier: 145296086
GI number: 145296086
Start: 2206388
End: 2207041
Strand: Reverse
Name: yvyE [H]
Synonym: cgR_2008
Alternate gene names: 145296086
Gene position: 2207041-2206388 (Counterclockwise)
Preceding gene: 145296088
Following gene: 145296085
Centisome position: 66.59
GC content: 50.76
Gene sequence:
>654_bases ATGGCACATCTCACGCAATATCAACTCCCTCAGGCCGATCGAGTCTTTGAGCACGAACTAGAGATCAAGCGCTCGCGATT TTTGACCTATATCACGCGTGTGCAAGATCAGGAGCAGGCGCGGGAATTTATTCACTCCATCAAGGAGTTGTATCCGGACG CGCGTCATCACTGCAGTGCCTTTATTTACCATGTGGATGGCTCAAATGATGTGGAGCGTTCCTCTGACGACGGCGAACCT TCTGGTACCGCGGGAAAACCCATGCTGGAGGCATTGCGTGGCTCGGGGATGAAAGATATTGCCGCTGTGGTGGTGCGTTA TTTTGGTGGCGTGAAACTGGGCACTGGCGGATTGGTCAACGCATATACCAATGCGGTGACAGAGCTTCTACCTGAGGTTT TACAAGTCACCCGCTCTGTTCGAGAGATTTTCAAGATTGATCTTCCACATTCTGATGCGGGACGCATTGAAGCGAATCTG CGCGGCATGGGCACCATAATTACTGACACAGAATATGGTGCAGAAGTCACCTACACCTTGGCTTTATTGCCTGGTGAACA GGCCTCAGTGGAATCTCAATTGTCATCCATGATGGGTGCAGAAATTGAATTGAAAGAATCCGGGCACATGTGGGTGGAAT CCCCGAGTGACTAG
Upstream 100 bases:
>100_bases CTTTGGGCAAAGGAGCCCACACCGAAAAGCTTTGCGAGGTTAACATGGCCACCAGGTTAGCGAAAATACTGAGACTAGGC GGGTTAAGATGTGAGATGCT
Downstream 100 bases:
>100_bases TGCGGTGTAAGAGCACTAGACTGTTCAACTATGAGCATGCAACCATACCCCCGCAACCCAATCGAAAAACGTAAGCAAGA AGTACGCAAGAACTCCCGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 217; Mature: 216
Protein sequence:
>217_residues MAHLTQYQLPQADRVFEHELEIKRSRFLTYITRVQDQEQAREFIHSIKELYPDARHHCSAFIYHVDGSNDVERSSDDGEP SGTAGKPMLEALRGSGMKDIAAVVVRYFGGVKLGTGGLVNAYTNAVTELLPEVLQVTRSVREIFKIDLPHSDAGRIEANL RGMGTIITDTEYGAEVTYTLALLPGEQASVESQLSSMMGAEIELKESGHMWVESPSD
Sequences:
>Translated_217_residues MAHLTQYQLPQADRVFEHELEIKRSRFLTYITRVQDQEQAREFIHSIKELYPDARHHCSAFIYHVDGSNDVERSSDDGEP SGTAGKPMLEALRGSGMKDIAAVVVRYFGGVKLGTGGLVNAYTNAVTELLPEVLQVTRSVREIFKIDLPHSDAGRIEANL RGMGTIITDTEYGAEVTYTLALLPGEQASVESQLSSMMGAEIELKESGHMWVESPSD >Mature_216_residues AHLTQYQLPQADRVFEHELEIKRSRFLTYITRVQDQEQAREFIHSIKELYPDARHHCSAFIYHVDGSNDVERSSDDGEPS GTAGKPMLEALRGSGMKDIAAVVVRYFGGVKLGTGGLVNAYTNAVTELLPEVLQVTRSVREIFKIDLPHSDAGRIEANLR GMGTIITDTEYGAEVTYTLALLPGEQASVESQLSSMMGAEIELKESGHMWVESPSD
Specific function: Unknown
COG id: COG1739
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the IMPACT family [H]
Homologues:
Organism=Escherichia coli, GI87082338, Length=184, Percent_Identity=38.0434782608696, Blast_Score=105, Evalue=2e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR020568 - InterPro: IPR000640 - InterPro: IPR015796 - InterPro: IPR015269 - InterPro: IPR020569 - InterPro: IPR001498 [H]
Pfam domain/function: PF09186 DUF1949; PF01205 UPF0029 [H]
EC number: NA
Molecular weight: Translated: 24042; Mature: 23911
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: PS00910 UPF0029
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHLTQYQLPQADRVFEHELEIKRSRFLTYITRVQDQEQAREFIHSIKELYPDARHHCSA CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHEE FIYHVDGSNDVERSSDDGEPSGTAGKPMLEALRGSGMKDIAAVVVRYFGGVKLGTGGLVN EEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCEEECCCCHHH AYTNAVTELLPEVLQVTRSVREIFKIDLPHSDAGRIEANLRGMGTIITDTEYGAEVTYTL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCEEEEECCCCCCEEEEEE ALLPGEQASVESQLSSMMGAEIELKESGHMWVESPSD EECCCCHHHHHHHHHHHHCCCEEEECCCCEEEECCCC >Mature Secondary Structure AHLTQYQLPQADRVFEHELEIKRSRFLTYITRVQDQEQAREFIHSIKELYPDARHHCSA CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHEE FIYHVDGSNDVERSSDDGEPSGTAGKPMLEALRGSGMKDIAAVVVRYFGGVKLGTGGLVN EEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCEEECCCCHHH AYTNAVTELLPEVLQVTRSVREIFKIDLPHSDAGRIEANLRGMGTIITDTEYGAEVTYTL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCEEEEECCCCCCEEEEEE ALLPGEQASVESQLSSMMGAEIELKESGHMWVESPSD EECCCCHHHHHHHHHHHHCCCEEEECCCCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377; 3141378; 8313894 [H]