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The map label for this gene is glnD [H]

Identifier: 145296023

GI number: 145296023

Start: 2133497

End: 2135575

Strand: Reverse

Name: glnD [H]

Synonym: cgR_1946

Alternate gene names: 145296023

Gene position: 2135575-2133497 (Counterclockwise)

Preceding gene: 145296024

Following gene: 145296022

Centisome position: 64.44

GC content: 57.14

Gene sequence:

>2079_bases
ATGAATGACCCAGCCCAGCTCCGCCATGGCGCCGAACAAGATGCCCTGGCGTTGCTGGGCTCTTTGGCGCTTCCAGCAGG
AACAACCCTTGCTGCCACCGGTTCACTAGCTCGCTCAGAACTAACGCCCTATTCGGATCTTGATCTAATTTTGATCCACT
CACCAGGGCAGACCCCCGAGGGCGTCGAAGATCTCTGGTACCCCATTTGGGACGCTAAGAAACGCCTCGACTATTCGGTT
CGGACACCCGCGGAATGCGTGGAAATGATTTCCGCAGACTCCACGGCAGCGCTTGCAATGCTCGATATTCGATTTATTGC
TGGCGAGGAAGATCTCTTTGCCACCACGCGCCGCAAGATTTTGGACAAGTGGCGCCAAGAACTTAATAAAAACTTTGATG
CGGTTGTCCAAACCGCGATTGCGCGCTGGCGACGCTCCGGCCCTGTCGTCGCTATGACCCGCCCCGACCTTAAACATGGC
AGGGGAGGGCTCCGCGATTTTGAACTTATCAACGCGCTAGCGTTGGGCCACCTCTGCGATGTGCCCAAGCTTGATTCGCA
ACACAGATTGCTTGTCGACGTTCGCACGCTGCTTCACGTTCACGCCCGACGCTCACGCGACGTGCTGGACCCAGAGTTTG
CTGTCGACATCGCTCTTGACCTTGGTTTCGTTGACCGCTATCACTTAGGTCGCGAAATCGCCGACGCCGCCCGAGCCATT
GATGACGCGCTTACTGCGGCACTTGCGACAGCCCGTGGACTGTTGCCTCGCCGCGGTGGCTTTGCCTTCCGCAATACCGT
GAGGCGACCACTCGATGTTGACGTGGTGGATGCCAACGGCACTATCGCGTTGTCGAAAAAACCAGATCTCACCGATCCCG
CACTGCCGTTGCGTGTAGCTGCGGCTGCTGCGAAAACTGGTTTGCCTGTCTCTGACAGCACATGGGCACGTCTTGCTGAG
TGCCCTGAGCTACCAGAACCTTGGCCACCTGCAGCTTCAGCCGACTTTTTCCGGATTCTCTCCAGCCCAGAAAATACCAG
GCGTGTAGTCAAACAAATGGATCGTCACCACCTGTGGGAACGCTACGTTCCAGAGTGGGATCGCATCAGAGGACTCATGC
CGCGTGAACCCAGCCACGTGTCCACCATCGATGAGCACAGTCTGAACACTGTGGCAGGCTGCGCATTAGAAACCGTCACC
GTGGCTCGCCCTGACCTATTGGTGCTGGGCGCGTTGTACCACGACATTGGTAAAGGAACTGATCGTCCGCATGAGCAAGT
CGGTGCGGAGATGGTGGCAAAAGCCGCAAGTCGGATGGGACTAAATCTGCGTGACCGCGCCAGCGTGCAAACGCTGGTCG
CGGAACACACAACGCTGGCCAAAATTGCCAGCCGCCTTGATCCGCGCTCGGAGGAGGCCGTCGAAAAGCTCTTAGATGCT
GTGCACTATGACTTGGTCACGCTCAATCTTCTCGAAGTGTTGACAGAGGCAGACGCAGAGGCAACTGGCCCAGGCGTGTG
GTCAACGCGACTTGAGCAGGCATTGCGGATTGTGTGTCAGTGCGCCCGTTCGAGGCTTATCGATATTCGGCCTGTTGCAC
CCATGCTTGTGCATCGAGGCGACATCGCGTTGGTGGAAAAAGACGGCACCAACACGGTGCGATGGCATGGCGATGACCTG
CGCAAAATCTTTAGTGTCATGGCTGCTAAAGGTTGGACAGTCAACGCGGCGCGCATGGTGGCGAATGGGGAGTGGACAGG
CGAATTTGATGTCCGCGCCAACGGGCCGCAGGATTTTGATCCGCAGTTATTCCTCCAGTCTTATCAATCTGGAATCTATT
CAGATGTTCCGGCACCGGCCCCGGGTCTGACCGCGACATTTTGGTACGGCAACATTTTGGAAGTACGCACCGAACTGCGC
ATTGGTGCGATCTATGCGTTGCTTAGGACGCTGCCATCCGCCCTCTGGATCAACGCCATCACACGTGGCGCCACCTTAAT
TGTTCAAGCGGCCCTTGCCCCAGGATTTGATCGCGTAGCCGTCGAGCGAGACGTGATGAAGGTCTTAGCCGCAAGCTGA

Upstream 100 bases:

>100_bases
CGACGGCAAGGTGTGGATGACCACTGTTGACGAGCTCGTACGCGTGCGTACCGGTGAGCGCGGCGAAGCTGCCCTCTAAG
AAAGATTCGCGCTTACATCA

Downstream 100 bases:

>100_bases
AATTGATCATATCGATCGTCCTCCCAGGTCTAACGTGACCTGGGAGGGCCGACCGGCTAGTATTTAAGGATTAGCAACCC
CGCACCCTAGAACCTACTGG

Product: PII uridylyl-transferase

Products: NA

Alternate protein names: PII uridylyl-transferase; UTase; Uridylyl-removing enzyme [H]

Number of amino acids: Translated: 692; Mature: 692

Protein sequence:

>692_residues
MNDPAQLRHGAEQDALALLGSLALPAGTTLAATGSLARSELTPYSDLDLILIHSPGQTPEGVEDLWYPIWDAKKRLDYSV
RTPAECVEMISADSTAALAMLDIRFIAGEEDLFATTRRKILDKWRQELNKNFDAVVQTAIARWRRSGPVVAMTRPDLKHG
RGGLRDFELINALALGHLCDVPKLDSQHRLLVDVRTLLHVHARRSRDVLDPEFAVDIALDLGFVDRYHLGREIADAARAI
DDALTAALATARGLLPRRGGFAFRNTVRRPLDVDVVDANGTIALSKKPDLTDPALPLRVAAAAAKTGLPVSDSTWARLAE
CPELPEPWPPAASADFFRILSSPENTRRVVKQMDRHHLWERYVPEWDRIRGLMPREPSHVSTIDEHSLNTVAGCALETVT
VARPDLLVLGALYHDIGKGTDRPHEQVGAEMVAKAASRMGLNLRDRASVQTLVAEHTTLAKIASRLDPRSEEAVEKLLDA
VHYDLVTLNLLEVLTEADAEATGPGVWSTRLEQALRIVCQCARSRLIDIRPVAPMLVHRGDIALVEKDGTNTVRWHGDDL
RKIFSVMAAKGWTVNAARMVANGEWTGEFDVRANGPQDFDPQLFLQSYQSGIYSDVPAPAPGLTATFWYGNILEVRTELR
IGAIYALLRTLPSALWINAITRGATLIVQAALAPGFDRVAVERDVMKVLAAS

Sequences:

>Translated_692_residues
MNDPAQLRHGAEQDALALLGSLALPAGTTLAATGSLARSELTPYSDLDLILIHSPGQTPEGVEDLWYPIWDAKKRLDYSV
RTPAECVEMISADSTAALAMLDIRFIAGEEDLFATTRRKILDKWRQELNKNFDAVVQTAIARWRRSGPVVAMTRPDLKHG
RGGLRDFELINALALGHLCDVPKLDSQHRLLVDVRTLLHVHARRSRDVLDPEFAVDIALDLGFVDRYHLGREIADAARAI
DDALTAALATARGLLPRRGGFAFRNTVRRPLDVDVVDANGTIALSKKPDLTDPALPLRVAAAAAKTGLPVSDSTWARLAE
CPELPEPWPPAASADFFRILSSPENTRRVVKQMDRHHLWERYVPEWDRIRGLMPREPSHVSTIDEHSLNTVAGCALETVT
VARPDLLVLGALYHDIGKGTDRPHEQVGAEMVAKAASRMGLNLRDRASVQTLVAEHTTLAKIASRLDPRSEEAVEKLLDA
VHYDLVTLNLLEVLTEADAEATGPGVWSTRLEQALRIVCQCARSRLIDIRPVAPMLVHRGDIALVEKDGTNTVRWHGDDL
RKIFSVMAAKGWTVNAARMVANGEWTGEFDVRANGPQDFDPQLFLQSYQSGIYSDVPAPAPGLTATFWYGNILEVRTELR
IGAIYALLRTLPSALWINAITRGATLIVQAALAPGFDRVAVERDVMKVLAAS
>Mature_692_residues
MNDPAQLRHGAEQDALALLGSLALPAGTTLAATGSLARSELTPYSDLDLILIHSPGQTPEGVEDLWYPIWDAKKRLDYSV
RTPAECVEMISADSTAALAMLDIRFIAGEEDLFATTRRKILDKWRQELNKNFDAVVQTAIARWRRSGPVVAMTRPDLKHG
RGGLRDFELINALALGHLCDVPKLDSQHRLLVDVRTLLHVHARRSRDVLDPEFAVDIALDLGFVDRYHLGREIADAARAI
DDALTAALATARGLLPRRGGFAFRNTVRRPLDVDVVDANGTIALSKKPDLTDPALPLRVAAAAAKTGLPVSDSTWARLAE
CPELPEPWPPAASADFFRILSSPENTRRVVKQMDRHHLWERYVPEWDRIRGLMPREPSHVSTIDEHSLNTVAGCALETVT
VARPDLLVLGALYHDIGKGTDRPHEQVGAEMVAKAASRMGLNLRDRASVQTLVAEHTTLAKIASRLDPRSEEAVEKLLDA
VHYDLVTLNLLEVLTEADAEATGPGVWSTRLEQALRIVCQCARSRLIDIRPVAPMLVHRGDIALVEKDGTNTVRWHGDDL
RKIFSVMAAKGWTVNAARMVANGEWTGEFDVRANGPQDFDPQLFLQSYQSGIYSDVPAPAPGLTATFWYGNILEVRTELR
IGAIYALLRTLPSALWINAITRGATLIVQAALAPGFDRVAVERDVMKVLAAS

Specific function: Modifies, by uridylylation or deuridylylation the PII (glnB) regulatory protein [H]

COG id: COG2844

COG function: function code O; UTP:GlnB (protein PII) uridylyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glnD family [H]

Homologues:

Organism=Escherichia coli, GI1786363, Length=554, Percent_Identity=25.9927797833935, Blast_Score=131, Evalue=1e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010043
- InterPro:   IPR003607
- InterPro:   IPR002934
- InterPro:   IPR013546 [H]

Pfam domain/function: PF08335 GlnD_UR_UTase; PF01909 NTP_transf_2 [H]

EC number: =2.7.7.59 [H]

Molecular weight: Translated: 76092; Mature: 76092

Theoretical pI: Translated: 6.34; Mature: 6.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDPAQLRHGAEQDALALLGSLALPAGTTLAATGSLARSELTPYSDLDLILIHSPGQTPE
CCCHHHHHCCCCHHHHHHHHHHHCCCCCCHHHCCCHHHHCCCCCCCCCEEEEECCCCCCC
GVEDLWYPIWDAKKRLDYSVRTPAECVEMISADSTAALAMLDIRFIAGEEDLFATTRRKI
CHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHEEHEECCCHHHHHHHHHHH
LDKWRQELNKNFDAVVQTAIARWRRSGPVVAMTRPDLKHGRGGLRDFELINALALGHLCD
HHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEECCCHHCCCCCCHHHHHHHHHHHHHHCC
VPKLDSQHRLLVDVRTLLHVHARRSRDVLDPEFAVDIALDLGFVDRYHLGREIADAARAI
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEHHCCHHHHHHHHHHHHHHHHH
DDALTAALATARGLLPRRGGFAFRNTVRRPLDVDVVDANGTIALSKKPDLTDPALPLRVA
HHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCEEEECCCCEEEECCCCCCCCCCCHHHHH
AAAAKTGLPVSDSTWARLAECPELPEPWPPAASADFFRILSSPENTRRVVKQMDRHHLWE
HHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHH
RYVPEWDRIRGLMPREPSHVSTIDEHSLNTVAGCALETVTVARPDLLVLGALYHDIGKGT
HHCCCHHHHCCCCCCCCCCCCCHHHHCCHHHHHHHHHHEEECCCCHHHHHHHHHHHCCCC
DRPHEQVGAEMVAKAASRMGLNLRDRASVQTLVAEHTTLAKIASRLDPRSEEAVEKLLDA
CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
VHYDLVTLNLLEVLTEADAEATGPGVWSTRLEQALRIVCQCARSRLIDIRPVAPMLVHRG
HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHHCCC
DIALVEKDGTNTVRWHGDDLRKIFSVMAAKGWTVNAARMVANGEWTGEFDVRANGPQDFD
CEEEEECCCCCEEEECCHHHHHHHHHHHCCCCCEEHHHEEECCCCCCEEEEECCCCCCCC
PQLFLQSYQSGIYSDVPAPAPGLTATFWYGNILEVRTELRIGAIYALLRTLPSALWINAI
HHHHHHHHHCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TRGATLIVQAALAPGFDRVAVERDVMKVLAAS
HCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNDPAQLRHGAEQDALALLGSLALPAGTTLAATGSLARSELTPYSDLDLILIHSPGQTPE
CCCHHHHHCCCCHHHHHHHHHHHCCCCCCHHHCCCHHHHCCCCCCCCCEEEEECCCCCCC
GVEDLWYPIWDAKKRLDYSVRTPAECVEMISADSTAALAMLDIRFIAGEEDLFATTRRKI
CHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHEEHEECCCHHHHHHHHHHH
LDKWRQELNKNFDAVVQTAIARWRRSGPVVAMTRPDLKHGRGGLRDFELINALALGHLCD
HHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEECCCHHCCCCCCHHHHHHHHHHHHHHCC
VPKLDSQHRLLVDVRTLLHVHARRSRDVLDPEFAVDIALDLGFVDRYHLGREIADAARAI
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEHHCCHHHHHHHHHHHHHHHHH
DDALTAALATARGLLPRRGGFAFRNTVRRPLDVDVVDANGTIALSKKPDLTDPALPLRVA
HHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCEEEECCCCEEEECCCCCCCCCCCHHHHH
AAAAKTGLPVSDSTWARLAECPELPEPWPPAASADFFRILSSPENTRRVVKQMDRHHLWE
HHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHH
RYVPEWDRIRGLMPREPSHVSTIDEHSLNTVAGCALETVTVARPDLLVLGALYHDIGKGT
HHCCCHHHHCCCCCCCCCCCCCHHHHCCHHHHHHHHHHEEECCCCHHHHHHHHHHHCCCC
DRPHEQVGAEMVAKAASRMGLNLRDRASVQTLVAEHTTLAKIASRLDPRSEEAVEKLLDA
CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
VHYDLVTLNLLEVLTEADAEATGPGVWSTRLEQALRIVCQCARSRLIDIRPVAPMLVHRG
HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHHCCC
DIALVEKDGTNTVRWHGDDLRKIFSVMAAKGWTVNAARMVANGEWTGEFDVRANGPQDFD
CEEEEECCCCCEEEECCHHHHHHHHHHHCCCCCEEHHHEEECCCCCCEEEEECCCCCCCC
PQLFLQSYQSGIYSDVPAPAPGLTATFWYGNILEVRTELRIGAIYALLRTLPSALWINAI
HHHHHHHHHCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TRGATLIVQAALAPGFDRVAVERDVMKVLAAS
HCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10227160; 12948626 [H]