Definition | Corynebacterium glutamicum R chromosome, complete genome. |
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Accession | NC_009342 |
Length | 3,314,179 |
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The map label for this gene is thiO/thiG [H]
Identifier: 145296003
GI number: 145296003
Start: 2114976
End: 2116100
Strand: Direct
Name: thiO/thiG [H]
Synonym: cgR_1927
Alternate gene names: 145296003
Gene position: 2114976-2116100 (Clockwise)
Preceding gene: 145296002
Following gene: 145296004
Centisome position: 63.82
GC content: 55.91
Gene sequence:
>1125_bases ATGAAAAAGCATGCGATTATTATCGGCGGCGGAATCATTGGGTTGACCACCTGCTTTGAATTCCAGGAGGCTGGTTACCA AGTCACGTTGATTGATCCTGACCCAATTTCCGGTGCGACTCATCATGCCGGCGGAATGTTGGCCCCCACCGCGGAGGTGC AGTATCAGCAACATGATCTGATTTTGTTGATGAAGGAATCCGCTCGCCTATACCCAGACCTCCTCCAAAGAGTGTCTAAA TACACGGACTTGCCCACTGGGTATCGCACTGATGGAACCCTTCTTATCGGTGCGGACCGCGCGGATGGCATGCATGTTGC GGAGTTGATTAAGTACATGCATTTGAAGGATTTGCCTGTCGATGTGTTGACTACTCGTCAGGCAAGGGCTGCGGAGCCAG CGTTGTCGCCGAGGATTTCCAAGGTGGTCAGCATTGATGGGGATCATCAGCTGTCGCCGCGTCTGTATGCCCGGGCGTTA TTGGATGCCATTTTGCAACGCGGTGCGGAGCATATTGCCGACGCTGTGATCTCTATTGATGGCCACGATCCGTGTTTGAC CGTGACGATGAATTCGGGGGTGAGGGTTGCGTCGAAAAGCGTTGTTGTTTTGGCGGCGGGCCTGGGCGCCGCAAGCATTC CCGGCTGGTTTGAGGGCGCGAACCCATTGCAGTTGAGGCCGGTGTACGGCGATATTGTGCGCGTGCGCGTGCCGGAGCGA CTGCAGCCGATGGTCACCAAGGTGGTGCGCGGGTTTGTGGAAGATCGTCAGATTTATATCATTCCGCGTACCGATGGCAC CCTCGCGATCGGCGCGACAAGCCGTGAGGATCACCCGCAACCTCGAACGGGCGCAGTGCATGATTTGCTACGCGATGCTA TCCGTTTGATTCCGGGCATTGAAGAAACCGAATTTATCGAAGTCACCTGCGGCGCCCGCCCCGGCACCCCGGATGACCTG CCGTACCTGGGATGGGTTGGATCCAATGTGATTGCGTCCACAGGATATTTCCGCCACGGAATTTTGCTGTCAGCCCTTGG TGCGCGCGCTGCCGTTGATATGGTAACCAACCAGCCACTGTTCCCCACTCTTGATGTGTGCGATCCGTTTCGCCACCAAA TTTAA
Upstream 100 bases:
>100_bases GTGTGGCTGGCGTTGCCATGGTGCGGGCTTTTTCTGAATCTGATGATCCACAGCAGGTCGCTGAAAATGTGGTGGCCAAC TTTGAATTAGGAAGGCTCTC
Downstream 100 bases:
>100_bases GGATTTTTCACAAGTGATTACCTACACCTTCAATGGCACATCTATGCGCTCTTCCGAATTGACCGTGGAGCAATTGGTCC ACCAAGAAATCGGCCACGAC
Product: hypothetical protein
Products: NA
Alternate protein names: Probable FAD-dependent glycine oxidase; Thiazole synthase [H]
Number of amino acids: Translated: 374; Mature: 374
Protein sequence:
>374_residues MKKHAIIIGGGIIGLTTCFEFQEAGYQVTLIDPDPISGATHHAGGMLAPTAEVQYQQHDLILLMKESARLYPDLLQRVSK YTDLPTGYRTDGTLLIGADRADGMHVAELIKYMHLKDLPVDVLTTRQARAAEPALSPRISKVVSIDGDHQLSPRLYARAL LDAILQRGAEHIADAVISIDGHDPCLTVTMNSGVRVASKSVVVLAAGLGAASIPGWFEGANPLQLRPVYGDIVRVRVPER LQPMVTKVVRGFVEDRQIYIIPRTDGTLAIGATSREDHPQPRTGAVHDLLRDAIRLIPGIEETEFIEVTCGARPGTPDDL PYLGWVGSNVIASTGYFRHGILLSALGARAAVDMVTNQPLFPTLDVCDPFRHQI
Sequences:
>Translated_374_residues MKKHAIIIGGGIIGLTTCFEFQEAGYQVTLIDPDPISGATHHAGGMLAPTAEVQYQQHDLILLMKESARLYPDLLQRVSK YTDLPTGYRTDGTLLIGADRADGMHVAELIKYMHLKDLPVDVLTTRQARAAEPALSPRISKVVSIDGDHQLSPRLYARAL LDAILQRGAEHIADAVISIDGHDPCLTVTMNSGVRVASKSVVVLAAGLGAASIPGWFEGANPLQLRPVYGDIVRVRVPER LQPMVTKVVRGFVEDRQIYIIPRTDGTLAIGATSREDHPQPRTGAVHDLLRDAIRLIPGIEETEFIEVTCGARPGTPDDL PYLGWVGSNVIASTGYFRHGILLSALGARAAVDMVTNQPLFPTLDVCDPFRHQI >Mature_374_residues MKKHAIIIGGGIIGLTTCFEFQEAGYQVTLIDPDPISGATHHAGGMLAPTAEVQYQQHDLILLMKESARLYPDLLQRVSK YTDLPTGYRTDGTLLIGADRADGMHVAELIKYMHLKDLPVDVLTTRQARAAEPALSPRISKVVSIDGDHQLSPRLYARAL LDAILQRGAEHIADAVISIDGHDPCLTVTMNSGVRVASKSVVVLAAGLGAASIPGWFEGANPLQLRPVYGDIVRVRVPER LQPMVTKVVRGFVEDRQIYIIPRTDGTLAIGATSREDHPQPRTGAVHDLLRDAIRLIPGIEETEFIEVTCGARPGTPDDL PYLGWVGSNVIASTGYFRHGILLSALGARAAVDMVTNQPLFPTLDVCDPFRHQI
Specific function: Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S [H]
COG id: COG0665
COG function: function code E; Glycine/D-amino acid oxidases (deaminating)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the thiG family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR006076 - InterPro: IPR012727 - InterPro: IPR008867 [H]
Pfam domain/function: PF01266 DAO; PF05690 ThiG [H]
EC number: NA
Molecular weight: Translated: 40603; Mature: 40603
Theoretical pI: Translated: 6.45; Mature: 6.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKHAIIIGGGIIGLTTCFEFQEAGYQVTLIDPDPISGATHHAGGMLAPTAEVQYQQHDL CCCCEEEEECCHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCEECCCHHCEECCCCE ILLMKESARLYPDLLQRVSKYTDLPTGYRTDGTLLIGADRADGMHVAELIKYMHLKDLPV EEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCH DVLTTRQARAAEPALSPRISKVVSIDGDHQLSPRLYARALLDAILQRGAEHIADAVISID HHHCCCCHHHCCCCCCCCHHHEEEECCCCCCCHHHHHHHHHHHHHHHCHHHHHHEEEEEC GHDPCLTVTMNSGVRVASKSVVVLAAGLGAASIPGWFEGANPLQLRPVYGDIVRVRVPER CCCCEEEEEECCCEEEECCCEEEEEECCCCCCCCCCCCCCCCEEEEECCCCEEEEECCHH LQPMVTKVVRGFVEDRQIYIIPRTDGTLAIGATSREDHPQPRTGAVHDLLRDAIRLIPGI HHHHHHHHHHHHHCCCEEEEEECCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCC EETEFIEVTCGARPGTPDDLPYLGWVGSNVIASTGYFRHGILLSALGARAAVDMVTNQPL CCCEEEEEEECCCCCCCCCCCEEEECCCCHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCC FPTLDVCDPFRHQI CCCHHCCCHHHHCC >Mature Secondary Structure MKKHAIIIGGGIIGLTTCFEFQEAGYQVTLIDPDPISGATHHAGGMLAPTAEVQYQQHDL CCCCEEEEECCHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCEECCCHHCEECCCCE ILLMKESARLYPDLLQRVSKYTDLPTGYRTDGTLLIGADRADGMHVAELIKYMHLKDLPV EEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCH DVLTTRQARAAEPALSPRISKVVSIDGDHQLSPRLYARALLDAILQRGAEHIADAVISID HHHCCCCHHHCCCCCCCCHHHEEEECCCCCCCHHHHHHHHHHHHHHHCHHHHHHEEEEEC GHDPCLTVTMNSGVRVASKSVVVLAAGLGAASIPGWFEGANPLQLRPVYGDIVRVRVPER CCCCEEEEEECCCEEEECCCEEEEEECCCCCCCCCCCCCCCCEEEEECCCCEEEEECCHH LQPMVTKVVRGFVEDRQIYIIPRTDGTLAIGATSREDHPQPRTGAVHDLLRDAIRLIPGI HHHHHHHHHHHHHCCCEEEEEECCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCC EETEFIEVTCGARPGTPDDLPYLGWVGSNVIASTGYFRHGILLSALGARAAVDMVTNQPL CCCEEEEEEECCCCCCCCCCCEEEECCCCHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCC FPTLDVCDPFRHQI CCCHHCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA