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The map label for this gene is 145295874

Identifier: 145295874

GI number: 145295874

Start: 1996145

End: 1998301

Strand: Reverse

Name: 145295874

Synonym: cgR_1799

Alternate gene names: NA

Gene position: 1998301-1996145 (Counterclockwise)

Preceding gene: 145295875

Following gene: 145295873

Centisome position: 60.3

GC content: 55.63

Gene sequence:

>2157_bases
ATGAATGATTCCCGAAATCGCGGCCGGAAGGTTACCCGCAAGGCGGGCCCACCAGAAGCTGGTCAGGAAAACCATGTGGA
TACCCCTGTCTTTCAGGCACCAGATGCTTCCTCTAACCAGAGCGCTGTAAAAGCTGAGACTGCCGGAAACGACAATCGGG
ATGTTGCGCAAGGTGCTCAAGGATCCCAAGATTCTCAGGGTTCCCAGAACGCTCAAGGTTCCCAGAACCGCGAGTCCGGA
AACAACAACCGCAACCGTTCCAACAACAACCGTCGCGGTGGTCGTGGACGTCGTGGATCCGGAAACGCCAATGAGGGCGC
GAACAACAACAGCGGTAACCAGAACCGTCAGGGCGGAAACCGTGGCAACCGCGGTGGCGGACGCCGAAACGTTGTTAAGT
CGATGCAGGGTGCGGATCTGACCCAGCGCCTGCCAGAGCCACCAAAGGCACCGGCAAACGGTCTGCGTATTTACGCACTT
GGTGGCATTTCCGAAATCGGTCGCAACATGACCGTGTTTGAGTACAACAACCGTCTGCTCATCGTGGACTGTGGTGTGCT
CTTCCCATCTTCAGGTGAGCCAGGCGTTGACCTGATTCTTCCTGATTTCGGTCCAATTGAGGATCACCTGCACCGCGTGG
ATGCATTGGTGGTTACTCACGGACACGAAGACCACATTGGTGCTATTCCTTGGCTGCTGAAGCTGCGCAACGATATCCCA
ATTTTGGCATCCCGTTTCACCTTGGCTCTGATTGCAGCTAAGTGTAAGGAACACCGTCAGCGTCCGAAGCTGATCGAGGT
CAACGAGCAGTCCAATGAGGACCGCGGACCGTTCAACATTCGCTTCTGGGCTGTTAACCACTCCATCCCAGACTGCCTTG
GTCTTGCTATCAAGACTCCTGCTGGTTTGGTCATCCACACCGGTGACATCAAGCTGGATCAGACTCCTCCTGATGGACGC
CCAACTGACCTGCCTGCATTGTCCCGTTTCGGTGACGAGGGCGTGGACTTGATGCTGTGTGACTCCACCAACGCCACCAC
CCCTGGTGTTTCTGGATCTGAAGCTGATGTTGCTCCAACCCTGAAGCGTTTGGTCGGCGATGCTAAGCAGCGCGTCATTT
TGGCGTCGTTTGCTTCCAACGTGTACCGCGTTCAGGCAGCTGTGGATGCTGCCGTTGCGTCCAACCGTAAGGTTGCATTC
AACGGTCGTTCCATGATTCGCAACATGGAGATCGCGGAGAAGCTTGGTTACCTGAAGGCACCTCGCGGAACCATTATTTC
CATGGATGATGCTTCTCGTATGGCTCCTCACAAGGTCATGCTGATTACCACTGGTACTCAGGGTGAGCCTATGGCTGCGC
TGTCTCGCATGGCGCGTCGTGAGCACCGACAGATCACTGTCCGTGATGGAGACTTGATTATCCTTTCTTCCTCCCTGGTT
CCAGGTAACGAAGAAGCAGTGTTCGGTGTCATCAACATGCTGGCTCAGATCGGTGCAACTGTTGTTACCGGTCGCGACGA
CAAAGTGCACACCTCGGGCCACGGCTACTCCGGAGAGCTGTTGTTCTTGTACAACGCCGCTCGTCCGAAGAACGCTATGC
CTGTCCACGGCGAGTGGCGCCACCTGCGCGCCAACAAGGAACTGGCTATCTCCACTGGTGTTAACCGCGACAACGTTGTG
CTTGCACAAAACGGTGTTGTGGTTGATATGGTCAACGGTCGCGCACAGGTTGTTGGTCAGATTCCAGTTGGTAACCTTTA
CGTCGACGGTGTCACCATGGGTGATATTGACGCGGACATCCTTGCAGACCGTACCTCGCTTGGTGAGGGTGGCTTGATCT
CGATCACTGCTGTCATCGACAACCGCACTGGCCGTCTGTTGGAGCGCCCAACCGTTCAGACCAGCGGTTTCTCTGAGGAT
GCAAAGTCCATGATGGGTGAGGTCACTGAGCTGTCCGAAACCACCATGAATGATCTTGCAGCTGAAGGTGAAAACGATCC
TTACCGCATGGTTCAGCAGCTGCGCCGCAAGCTCTCTCGCTTCGTCGAGCAGAAGTGGAAGCGTCAGCCGGTCATCATGC
CAACCGTCATTCCGATGACTGCGGAAACCACGCACATCGGTGACGATGAGGTTCGCGCTTCACGCGAGTCCCTGTAA

Upstream 100 bases:

>100_bases
GCATCAACGTAGGAGATCCTCGACTTCCAATTATGGCTCCAAATGAGCGGGAACTTGAGGCTCTCCGAGAAGACATGAAA
AAAGCTGGAGTTCTATAAAT

Downstream 100 bases:

>100_bases
AAGCATTTCGCTTTTCGACGTCGCGAGCCCGCAGCACCCAACCTGGGTGCCGCGGGCTCAACGCGTTTCTACACATTGAT
CTAGTCTTGGTTGCATGAAT

Product: hypothetical protein

Products: NA

Alternate protein names: RNase J [H]

Number of amino acids: Translated: 718; Mature: 718

Protein sequence:

>718_residues
MNDSRNRGRKVTRKAGPPEAGQENHVDTPVFQAPDASSNQSAVKAETAGNDNRDVAQGAQGSQDSQGSQNAQGSQNRESG
NNNRNRSNNNRRGGRGRRGSGNANEGANNNSGNQNRQGGNRGNRGGGRRNVVKSMQGADLTQRLPEPPKAPANGLRIYAL
GGISEIGRNMTVFEYNNRLLIVDCGVLFPSSGEPGVDLILPDFGPIEDHLHRVDALVVTHGHEDHIGAIPWLLKLRNDIP
ILASRFTLALIAAKCKEHRQRPKLIEVNEQSNEDRGPFNIRFWAVNHSIPDCLGLAIKTPAGLVIHTGDIKLDQTPPDGR
PTDLPALSRFGDEGVDLMLCDSTNATTPGVSGSEADVAPTLKRLVGDAKQRVILASFASNVYRVQAAVDAAVASNRKVAF
NGRSMIRNMEIAEKLGYLKAPRGTIISMDDASRMAPHKVMLITTGTQGEPMAALSRMARREHRQITVRDGDLIILSSSLV
PGNEEAVFGVINMLAQIGATVVTGRDDKVHTSGHGYSGELLFLYNAARPKNAMPVHGEWRHLRANKELAISTGVNRDNVV
LAQNGVVVDMVNGRAQVVGQIPVGNLYVDGVTMGDIDADILADRTSLGEGGLISITAVIDNRTGRLLERPTVQTSGFSED
AKSMMGEVTELSETTMNDLAAEGENDPYRMVQQLRRKLSRFVEQKWKRQPVIMPTVIPMTAETTHIGDDEVRASRESL

Sequences:

>Translated_718_residues
MNDSRNRGRKVTRKAGPPEAGQENHVDTPVFQAPDASSNQSAVKAETAGNDNRDVAQGAQGSQDSQGSQNAQGSQNRESG
NNNRNRSNNNRRGGRGRRGSGNANEGANNNSGNQNRQGGNRGNRGGGRRNVVKSMQGADLTQRLPEPPKAPANGLRIYAL
GGISEIGRNMTVFEYNNRLLIVDCGVLFPSSGEPGVDLILPDFGPIEDHLHRVDALVVTHGHEDHIGAIPWLLKLRNDIP
ILASRFTLALIAAKCKEHRQRPKLIEVNEQSNEDRGPFNIRFWAVNHSIPDCLGLAIKTPAGLVIHTGDIKLDQTPPDGR
PTDLPALSRFGDEGVDLMLCDSTNATTPGVSGSEADVAPTLKRLVGDAKQRVILASFASNVYRVQAAVDAAVASNRKVAF
NGRSMIRNMEIAEKLGYLKAPRGTIISMDDASRMAPHKVMLITTGTQGEPMAALSRMARREHRQITVRDGDLIILSSSLV
PGNEEAVFGVINMLAQIGATVVTGRDDKVHTSGHGYSGELLFLYNAARPKNAMPVHGEWRHLRANKELAISTGVNRDNVV
LAQNGVVVDMVNGRAQVVGQIPVGNLYVDGVTMGDIDADILADRTSLGEGGLISITAVIDNRTGRLLERPTVQTSGFSED
AKSMMGEVTELSETTMNDLAAEGENDPYRMVQQLRRKLSRFVEQKWKRQPVIMPTVIPMTAETTHIGDDEVRASRESL
>Mature_718_residues
MNDSRNRGRKVTRKAGPPEAGQENHVDTPVFQAPDASSNQSAVKAETAGNDNRDVAQGAQGSQDSQGSQNAQGSQNRESG
NNNRNRSNNNRRGGRGRRGSGNANEGANNNSGNQNRQGGNRGNRGGGRRNVVKSMQGADLTQRLPEPPKAPANGLRIYAL
GGISEIGRNMTVFEYNNRLLIVDCGVLFPSSGEPGVDLILPDFGPIEDHLHRVDALVVTHGHEDHIGAIPWLLKLRNDIP
ILASRFTLALIAAKCKEHRQRPKLIEVNEQSNEDRGPFNIRFWAVNHSIPDCLGLAIKTPAGLVIHTGDIKLDQTPPDGR
PTDLPALSRFGDEGVDLMLCDSTNATTPGVSGSEADVAPTLKRLVGDAKQRVILASFASNVYRVQAAVDAAVASNRKVAF
NGRSMIRNMEIAEKLGYLKAPRGTIISMDDASRMAPHKVMLITTGTQGEPMAALSRMARREHRQITVRDGDLIILSSSLV
PGNEEAVFGVINMLAQIGATVVTGRDDKVHTSGHGYSGELLFLYNAARPKNAMPVHGEWRHLRANKELAISTGVNRDNVV
LAQNGVVVDMVNGRAQVVGQIPVGNLYVDGVTMGDIDADILADRTSLGEGGLISITAVIDNRTGRLLERPTVQTSGFSED
AKSMMGEVTELSETTMNDLAAEGENDPYRMVQQLRRKLSRFVEQKWKRQPVIMPTVIPMTAETTHIGDDEVRASRESL

Specific function: Unknown

COG id: COG0595

COG function: function code R; Predicted hydrolase of the metallo-beta-lactamase superfamily

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the metallo-beta-lactamase superfamily. RNA-metabolizing metallo-beta-lactamase-like family. RNase J subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279
- InterPro:   IPR011108
- InterPro:   IPR001587 [H]

Pfam domain/function: PF00753 Lactamase_B; PF07521 RMMBL [H]

EC number: NA

Molecular weight: Translated: 77661; Mature: 77661

Theoretical pI: Translated: 8.34; Mature: 8.34

Prosite motif: PS01292 UPF0036

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDSRNRGRKVTRKAGPPEAGQENHVDTPVFQAPDASSNQSAVKAETAGNDNRDVAQGAQ
CCCCCCCCCHHHHCCCCCCCCCCCCCCCCCEECCCCCCCCCEEEEECCCCCCCHHHCCCC
GSQDSQGSQNAQGSQNRESGNNNRNRSNNNRRGGRGRRGSGNANEGANNNSGNQNRQGGN
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
RGNRGGGRRNVVKSMQGADLTQRLPEPPKAPANGLRIYALGGISEIGRNMTVFEYNNRLL
CCCCCCCHHHHHHHHCCCCHHHHCCCCCCCCCCCEEEEEECCHHHHCCCEEEEEECCEEE
IVDCGVLFPSSGEPGVDLILPDFGPIEDHLHRVDALVVTHGHEDHIGAIPWLLKLRNDIP
EEECCEEECCCCCCCCEEECCCCCCHHHHHHHHEEEEEECCCCCCCCHHHHHHHHCCCCC
ILASRFTLALIAAKCKEHRQRPKLIEVNEQSNEDRGPFNIRFWAVNHSIPDCLGLAIKTP
HHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEEEEEECCCCCHHHCEEEECC
AGLVIHTGDIKLDQTPPDGRPTDLPALSRFGDEGVDLMLCDSTNATTPGVSGSEADVAPT
CCEEEEECCEEECCCCCCCCCCCCHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCHHHHH
LKRLVGDAKQRVILASFASNVYRVQAAVDAAVASNRKVAFNGRSMIRNMEIAEKLGYLKA
HHHHHHHHHHHEEHHHHHCCCEEEHHHHHHHHHCCCEEEECCHHHHHHHHHHHHCCCCCC
PRGTIISMDDASRMAPHKVMLITTGTQGEPMAALSRMARREHRQITVRDGDLIILSSSLV
CCCCEEEECCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCEEEEECCCEEEEECCCC
PGNEEAVFGVINMLAQIGATVVTGRDDKVHTSGHGYSGELLFLYNAARPKNAMPVHGEWR
CCCCHHHHHHHHHHHHCCCEEEECCCCEEEECCCCCCCEEEEEEECCCCCCCCCCCCCHH
HLRANKELAISTGVNRDNVVLAQNGVVVDMVNGRAQVVGQIPVGNLYVDGVTMGDIDADI
EECCCCEEEEECCCCCCCEEEEECCEEEEEECCCEEEEEECCCCCEEECCEEECCCCHHH
LADRTSLGEGGLISITAVIDNRTGRLLERPTVQTSGFSEDAKSMMGEVTELSETTMNDLA
HHCCCCCCCCCEEEEEEEEECCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
AEGENDPYRMVQQLRRKLSRFVEQKWKRQPVIMPTVIPMTAETTHIGDDEVRASRESL
HCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHHCC
>Mature Secondary Structure
MNDSRNRGRKVTRKAGPPEAGQENHVDTPVFQAPDASSNQSAVKAETAGNDNRDVAQGAQ
CCCCCCCCCHHHHCCCCCCCCCCCCCCCCCEECCCCCCCCCEEEEECCCCCCCHHHCCCC
GSQDSQGSQNAQGSQNRESGNNNRNRSNNNRRGGRGRRGSGNANEGANNNSGNQNRQGGN
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
RGNRGGGRRNVVKSMQGADLTQRLPEPPKAPANGLRIYALGGISEIGRNMTVFEYNNRLL
CCCCCCCHHHHHHHHCCCCHHHHCCCCCCCCCCCEEEEEECCHHHHCCCEEEEEECCEEE
IVDCGVLFPSSGEPGVDLILPDFGPIEDHLHRVDALVVTHGHEDHIGAIPWLLKLRNDIP
EEECCEEECCCCCCCCEEECCCCCCHHHHHHHHEEEEEECCCCCCCCHHHHHHHHCCCCC
ILASRFTLALIAAKCKEHRQRPKLIEVNEQSNEDRGPFNIRFWAVNHSIPDCLGLAIKTP
HHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEEEEEECCCCCHHHCEEEECC
AGLVIHTGDIKLDQTPPDGRPTDLPALSRFGDEGVDLMLCDSTNATTPGVSGSEADVAPT
CCEEEEECCEEECCCCCCCCCCCCHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCHHHHH
LKRLVGDAKQRVILASFASNVYRVQAAVDAAVASNRKVAFNGRSMIRNMEIAEKLGYLKA
HHHHHHHHHHHEEHHHHHCCCEEEHHHHHHHHHCCCEEEECCHHHHHHHHHHHHCCCCCC
PRGTIISMDDASRMAPHKVMLITTGTQGEPMAALSRMARREHRQITVRDGDLIILSSSLV
CCCCEEEECCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCEEEEECCCEEEEECCCC
PGNEEAVFGVINMLAQIGATVVTGRDDKVHTSGHGYSGELLFLYNAARPKNAMPVHGEWR
CCCCHHHHHHHHHHHHCCCEEEECCCCEEEECCCCCCCEEEEEEECCCCCCCCCCCCCHH
HLRANKELAISTGVNRDNVVLAQNGVVVDMVNGRAQVVGQIPVGNLYVDGVTMGDIDADI
EECCCCEEEEECCCCCCCEEEEECCEEEEEECCCEEEEEECCCCCEEECCEEECCCCHHH
LADRTSLGEGGLISITAVIDNRTGRLLERPTVQTSGFSEDAKSMMGEVTELSETTMNDLA
HHCCCCCCCCCEEEEEEEEECCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
AEGENDPYRMVQQLRRKLSRFVEQKWKRQPVIMPTVIPMTAETTHIGDDEVRASRESL
HCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12948626 [H]