Definition | Corynebacterium glutamicum R chromosome, complete genome. |
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Accession | NC_009342 |
Length | 3,314,179 |
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The map label for this gene is recX [H]
Identifier: 145295859
GI number: 145295859
Start: 1982370
End: 1983017
Strand: Reverse
Name: recX [H]
Synonym: cgR_1784
Alternate gene names: 145295859
Gene position: 1983017-1982370 (Counterclockwise)
Preceding gene: 145295860
Following gene: 145295854
Centisome position: 59.83
GC content: 54.01
Gene sequence:
>648_bases ATGATGTGGCTTGTTCCTGCTTTTTCGTCAACGAAGGGCAACAACGCGATGGATATCCAAGCCGAAAAGATTGAAAAGCT CAGAAAAGCACTCGACAACTTTGAACGCGCTCATGCGCGAGGCGAATCAGACTTCTTTGACCATGAAAAAGAAGAAAAGA AAGCCAACGTACGCAGACGTGCCCTGCTGCTGCTTAACCAACGCGCACGATCAATCAACGAACTAAGCACCAGACTTAAA GCACTGGAGTTTGAGGAAGACATCATCAATGAGGTCATTGACGATCTCACCAGATCCAAACTGCTTGATGATGAAGTTTT TGCCACTGAGTGGGTTCGGCAACGTGCTGCCAGGCGAGGAAAATCTTCGCGTGTGCTGGACCGCGAACTGCAGGAAAAAG GCGTCGACAAGCAAACGCGTGCTGCGGCGCTTGAGCAAATCGACCAGGCCGATGAGCGGGATACGGCGCGGGCGGTGGCC GTGAAAAAGGCGCGCTCAGAGACCAAGATTCCGCAGGACCGCGCCGACTACGACAAAGCGCTTCGGCGCGTGGTTGGTGC GCTGGCACGGCGGGGATTTCCGGCTGGAATGTCCATGGACCTTGCGCGGGAAGCGCTAGACGCGCGAATCGAGGATTTGA AAAACTAA
Upstream 100 bases:
>100_bases GTGCCTAACGTTGACTTCGATGATGAAGCCGACACCGAAGCAGACGCTGAAGACTAAGCACCAGTTTTAACAAAGCAGGG ACAATCCACACACTTAAACC
Downstream 100 bases:
>100_bases ACCCCGGATGGGAATCATCCGGGGTAAGGGAGTTACTGAACTCCAGGGGTTTTCAGATCCTTATAATCAGGATCCTGCCA GTCGACATTGACATTGTCCT
Product: recombination regulator RecX
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 215; Mature: 215
Protein sequence:
>215_residues MMWLVPAFSSTKGNNAMDIQAEKIEKLRKALDNFERAHARGESDFFDHEKEEKKANVRRRALLLLNQRARSINELSTRLK ALEFEEDIINEVIDDLTRSKLLDDEVFATEWVRQRAARRGKSSRVLDRELQEKGVDKQTRAAALEQIDQADERDTARAVA VKKARSETKIPQDRADYDKALRRVVGALARRGFPAGMSMDLAREALDARIEDLKN
Sequences:
>Translated_215_residues MMWLVPAFSSTKGNNAMDIQAEKIEKLRKALDNFERAHARGESDFFDHEKEEKKANVRRRALLLLNQRARSINELSTRLK ALEFEEDIINEVIDDLTRSKLLDDEVFATEWVRQRAARRGKSSRVLDRELQEKGVDKQTRAAALEQIDQADERDTARAVA VKKARSETKIPQDRADYDKALRRVVGALARRGFPAGMSMDLAREALDARIEDLKN >Mature_215_residues MMWLVPAFSSTKGNNAMDIQAEKIEKLRKALDNFERAHARGESDFFDHEKEEKKANVRRRALLLLNQRARSINELSTRLK ALEFEEDIINEVIDDLTRSKLLDDEVFATEWVRQRAARRGKSSRVLDRELQEKGVDKQTRAAALEQIDQADERDTARAVA VKKARSETKIPQDRADYDKALRRVVGALARRGFPAGMSMDLAREALDARIEDLKN
Specific function: Modulates recA activity [H]
COG id: COG2137
COG function: function code R; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the recX family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003783 [H]
Pfam domain/function: PF02631 RecX [H]
EC number: NA
Molecular weight: Translated: 24677; Mature: 24677
Theoretical pI: Translated: 9.83; Mature: 9.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMWLVPAFSSTKGNNAMDIQAEKIEKLRKALDNFERAHARGESDFFDHEKEEKKANVRRR CEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHH ALLLLNQRARSINELSTRLKALEFEEDIINEVIDDLTRSKLLDDEVFATEWVRQRAARRG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC KSSRVLDRELQEKGVDKQTRAAALEQIDQADERDTARAVAVKKARSETKIPQDRADYDKA CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH LRRVVGALARRGFPAGMSMDLAREALDARIEDLKN HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MMWLVPAFSSTKGNNAMDIQAEKIEKLRKALDNFERAHARGESDFFDHEKEEKKANVRRR CEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHH ALLLLNQRARSINELSTRLKALEFEEDIINEVIDDLTRSKLLDDEVFATEWVRQRAARRG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC KSSRVLDRELQEKGVDKQTRAAALEQIDQADERDTARAVAVKKARSETKIPQDRADYDKA CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH LRRVVGALARRGFPAGMSMDLAREALDARIEDLKN HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12948626 [H]