Click here to switch to the map view.

The map label for this gene is cstA [H]

Identifier: 145294829

GI number: 145294829

Start: 856760

End: 859039

Strand: Direct

Name: cstA [H]

Synonym: cgR_0776

Alternate gene names: 145294829

Gene position: 856760-859039 (Clockwise)

Preceding gene: 145294826

Following gene: 145294830

Centisome position: 25.85

GC content: 53.86

Gene sequence:

>2280_bases
GTGACCATAAAACAGACTGACAACATCAATGACGATGATTTGGTGTACAGCAACGCTACTGACCTTCCAGTAGGCGTGAA
GAAGTCCCCTAAAATGTCACCGACCGCCCGCGTTGGTCTCCTTGTCTTTGGAGTTATCGCGGCGGTGGGTTGGGGAGCAA
TCGCTTTCTCCCGTGGCGAAACAATCAACTCTGTGTGGCTGGTTTTGGCAGCAGTTGGTTCCTATATCATTGCGTTTTCT
TTCTATGCCCGACTGATTGAATACAAAGTTGTTAAGCCGAAAGATCAGCGAGCAACCCCGGCGGAATACGTTAATGACGG
CAAGGACTATGTCCCAACGGATCGTCGTGTGCTTTTTGGCCACCACTTTGCAGCTATTGCAGGTGCCGGTCCATTGGTTG
GACCTGTCATGGCCGCGCAGATGGGCTACCTGCCAGGCACCTTGTGGATTATCCTCGGTGTGATTTTCGCCGGTGCAGTG
CAGGACTACCTAGTGCTGTGGGTGTCTACTCGTAGGCGTGGACGCTCACTTGGCCAGATGGTTCGTGATGAAATGGGCAC
GGTCGGTGGAGCTGCCGGTATCTTGGCCACCATCTCCATCATGATCATCATTATCGCGGTGCTCGCATTGATCGTGGTTA
ATGCCTTGGCTGATTCACCATGGGGCGTTTTCTCCATCACCATGACCATCCCAATTGCACTGTTCATGGGTGTGTACTTG
CGTTACCTGCGCCCAGGTCGTGTTACTGAAGTGTCCATCATCGGTGTGGCACTGCTCCTGCTGGCTATCGTTGCTGGTGG
TTGGGTTGCAGACACCTCATGGGGCGTGGAATGGTTCACCTGGTCTAAGACCACTTTGGCGTTGGCCTTGATCGGTTACG
GAATCATGGCTGCGATTTTGCCGGTGTGGCTGCTGCTTGCACCGCGCGATTACCTGTCTACCTTTATGAAGATCGGCGTC
ATCGGTCTGTTGGCAGTGGGTATTTTGTTCGCACGTCCTGAGGTGCAGATGCCTTCCGTGACCTCCTTCGCACTTGAGGG
CAACGGTCCGGTGTTCTCTGGAAGTCTGTTCCCATTCCTGTTCATCACGATTGCCTGTGGTGCACTGTCTGGTTTCCACG
CACTGATTTCTTCAGGAACCACACCAAAGCTCGTGGAGAAGGAATCCCAGATGCGCATGCTCGGCTACGGCGGCATGTTG
ATGGAATCTTTCGTGGCGATGATGGCACTGATCACCGCTGTTATTCTGGATCGTCACCTGTACTTCTCCATGAACGCTCC
GCTGGCACTGACTGGTGGAGATCCAGCAACCGCAGCTGAGTGGGTTAACTCCATTGGGCTGACAGGTGCGGATATCACCC
CGGAACAGCTGTCGGAAGCTGCTGAAAGTGTCGGAGAATCCACTGTTATTTCCCGTACCGGTGGCGCACCAACCTTGGCG
TTCGGTATGTCTGAAATCCTCTCCGGATTCATCGGCGGCGCCGGAATGAAGGCGTTCTGGTATCACTTCGCCATCATGTT
TGAGGCTCTGTTCATCCTCACTACTGTGGACGCAGGTACTCGTGTGGCTCGCTTTATGATGACCGATACCTTGGGCAATG
TTCCAGGTCTGCGCCGTTTCAAAGATCCTTCATGGACTGTCGGTAACTGGATTTCTACCGTGTTTGTGTGTGCTCTATGG
GGTGCTATTTTGCTCATGGGTGTTACCGATCCACTGGGAGGCATCAACGTGCTGTTCCCACTATTCGGTATCGCTAACCA
GCTGCTCGCTGCCATCGCGCTAGCCCTTGTGCTGGTTGTTGTGGTGAAGAAAGGCCTGTACAAGTGGGCGTGGATTCCAG
CTGTTCCTTTGGCATGGGACCTCATTGTCACGATGACTGCGTCATGGCAGAAGATTTTCCACTCTGATCCGGCTATTGGC
TACTGGGCTCAGAACGCGAACTTCCGCGATGCAAAGTCTCAAGGCCTTACCGAATTTGGTGCCGCTAAATCTCCTGAGGC
AATCGATGCGGTTATCCGAAACACCATGATTCAGGGCATCTTGTCCATCCTGTTTGCGGTGCTCGTCCTCGTTGTTGTCG
GCGCAGCCATTGCGGTGTGCATCAAGTCCATCAGGGCTCGTGCAGCCGGAACACCTTTGGAGACCACTGAAGAGCCTGAT
ACTGAATCTGAGTTCTTCGCCCCAACTGGATTCCTTGCATCTTCCAGGGATAAGGAAGTTCAGGCCATGTGGGACGAGCG
CTACCCAAGCGGTGCGCCCGTGTCTTCTGGAGGGCACTAA

Upstream 100 bases:

>100_bases
GAACTTTCCTTTTTCTGCATGCATTTCTGCACACAGTTTCTGCCCGCTGTTTCTACGCATAGTGGCTTTGAAACGACCCG
AAGAGAAAACAGTAAAGATC

Downstream 100 bases:

>100_bases
AACATGATGGCTCTTACTCATGCACTGTGGAAAATCCCGCGGGCGGTGTGGTGGTATCTCACTGAGCTCATGGGGGACAC
GGCGTATTCCAAGTATGTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 759; Mature: 758

Protein sequence:

>759_residues
MTIKQTDNINDDDLVYSNATDLPVGVKKSPKMSPTARVGLLVFGVIAAVGWGAIAFSRGETINSVWLVLAAVGSYIIAFS
FYARLIEYKVVKPKDQRATPAEYVNDGKDYVPTDRRVLFGHHFAAIAGAGPLVGPVMAAQMGYLPGTLWIILGVIFAGAV
QDYLVLWVSTRRRGRSLGQMVRDEMGTVGGAAGILATISIMIIIIAVLALIVVNALADSPWGVFSITMTIPIALFMGVYL
RYLRPGRVTEVSIIGVALLLLAIVAGGWVADTSWGVEWFTWSKTTLALALIGYGIMAAILPVWLLLAPRDYLSTFMKIGV
IGLLAVGILFARPEVQMPSVTSFALEGNGPVFSGSLFPFLFITIACGALSGFHALISSGTTPKLVEKESQMRMLGYGGML
MESFVAMMALITAVILDRHLYFSMNAPLALTGGDPATAAEWVNSIGLTGADITPEQLSEAAESVGESTVISRTGGAPTLA
FGMSEILSGFIGGAGMKAFWYHFAIMFEALFILTTVDAGTRVARFMMTDTLGNVPGLRRFKDPSWTVGNWISTVFVCALW
GAILLMGVTDPLGGINVLFPLFGIANQLLAAIALALVLVVVVKKGLYKWAWIPAVPLAWDLIVTMTASWQKIFHSDPAIG
YWAQNANFRDAKSQGLTEFGAAKSPEAIDAVIRNTMIQGILSILFAVLVLVVVGAAIAVCIKSIRARAAGTPLETTEEPD
TESEFFAPTGFLASSRDKEVQAMWDERYPSGAPVSSGGH

Sequences:

>Translated_759_residues
MTIKQTDNINDDDLVYSNATDLPVGVKKSPKMSPTARVGLLVFGVIAAVGWGAIAFSRGETINSVWLVLAAVGSYIIAFS
FYARLIEYKVVKPKDQRATPAEYVNDGKDYVPTDRRVLFGHHFAAIAGAGPLVGPVMAAQMGYLPGTLWIILGVIFAGAV
QDYLVLWVSTRRRGRSLGQMVRDEMGTVGGAAGILATISIMIIIIAVLALIVVNALADSPWGVFSITMTIPIALFMGVYL
RYLRPGRVTEVSIIGVALLLLAIVAGGWVADTSWGVEWFTWSKTTLALALIGYGIMAAILPVWLLLAPRDYLSTFMKIGV
IGLLAVGILFARPEVQMPSVTSFALEGNGPVFSGSLFPFLFITIACGALSGFHALISSGTTPKLVEKESQMRMLGYGGML
MESFVAMMALITAVILDRHLYFSMNAPLALTGGDPATAAEWVNSIGLTGADITPEQLSEAAESVGESTVISRTGGAPTLA
FGMSEILSGFIGGAGMKAFWYHFAIMFEALFILTTVDAGTRVARFMMTDTLGNVPGLRRFKDPSWTVGNWISTVFVCALW
GAILLMGVTDPLGGINVLFPLFGIANQLLAAIALALVLVVVVKKGLYKWAWIPAVPLAWDLIVTMTASWQKIFHSDPAIG
YWAQNANFRDAKSQGLTEFGAAKSPEAIDAVIRNTMIQGILSILFAVLVLVVVGAAIAVCIKSIRARAAGTPLETTEEPD
TESEFFAPTGFLASSRDKEVQAMWDERYPSGAPVSSGGH
>Mature_758_residues
TIKQTDNINDDDLVYSNATDLPVGVKKSPKMSPTARVGLLVFGVIAAVGWGAIAFSRGETINSVWLVLAAVGSYIIAFSF
YARLIEYKVVKPKDQRATPAEYVNDGKDYVPTDRRVLFGHHFAAIAGAGPLVGPVMAAQMGYLPGTLWIILGVIFAGAVQ
DYLVLWVSTRRRGRSLGQMVRDEMGTVGGAAGILATISIMIIIIAVLALIVVNALADSPWGVFSITMTIPIALFMGVYLR
YLRPGRVTEVSIIGVALLLLAIVAGGWVADTSWGVEWFTWSKTTLALALIGYGIMAAILPVWLLLAPRDYLSTFMKIGVI
GLLAVGILFARPEVQMPSVTSFALEGNGPVFSGSLFPFLFITIACGALSGFHALISSGTTPKLVEKESQMRMLGYGGMLM
ESFVAMMALITAVILDRHLYFSMNAPLALTGGDPATAAEWVNSIGLTGADITPEQLSEAAESVGESTVISRTGGAPTLAF
GMSEILSGFIGGAGMKAFWYHFAIMFEALFILTTVDAGTRVARFMMTDTLGNVPGLRRFKDPSWTVGNWISTVFVCALWG
AILLMGVTDPLGGINVLFPLFGIANQLLAAIALALVLVVVVKKGLYKWAWIPAVPLAWDLIVTMTASWQKIFHSDPAIGY
WAQNANFRDAKSQGLTEFGAAKSPEAIDAVIRNTMIQGILSILFAVLVLVVVGAAIAVCIKSIRARAAGTPLETTEEPDT
ESEFFAPTGFLASSRDKEVQAMWDERYPSGAPVSSGGH

Specific function: Peptide Utilization During Carbon Starvation. [C]

COG id: COG1966

COG function: function code T; Carbon starvation protein, predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CstA family [H]

Homologues:

Organism=Escherichia coli, GI1786814, Length=688, Percent_Identity=53.3430232558139, Blast_Score=690, Evalue=0.0,
Organism=Escherichia coli, GI87082431, Length=707, Percent_Identity=49.2220650636492, Blast_Score=629, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003706 [H]

Pfam domain/function: PF02554 CstA [H]

EC number: NA

Molecular weight: Translated: 81121; Mature: 80990

Theoretical pI: Translated: 6.42; Mature: 6.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIKQTDNINDDDLVYSNATDLPVGVKKSPKMSPTARVGLLVFGVIAAVGWGAIAFSRGE
CCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEECCCC
TINSVWLVLAAVGSYIIAFSFYARLIEYKVVKPKDQRATPAEYVNDGKDYVPTDRRVLFG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCEEEHH
HHFAAIAGAGPLVGPVMAAQMGYLPGTLWIILGVIFAGAVQDYLVLWVSTRRRGRSLGQM
HHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VRDEMGTVGGAAGILATISIMIIIIAVLALIVVNALADSPWGVFSITMTIPIALFMGVYL
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHH
RYLRPGRVTEVSIIGVALLLLAIVAGGWVADTSWGVEWFTWSKTTLALALIGYGIMAAIL
HHHCCCCCHHHHHHHHHHHHHHHHHCCCEECCCCCCEEEEECHHHHHHHHHHHHHHHHHH
PVWLLLAPRDYLSTFMKIGVIGLLAVGILFARPEVQMPSVTSFALEGNGPVFSGSLFPFL
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEECCHHHHHH
FITIACGALSGFHALISSGTTPKLVEKESQMRMLGYGGMLMESFVAMMALITAVILDRHL
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
YFSMNAPLALTGGDPATAAEWVNSIGLTGADITPEQLSEAAESVGESTVISRTGGAPTLA
EEECCCCEEEECCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCHHH
FGMSEILSGFIGGAGMKAFWYHFAIMFEALFILTTVDAGTRVARFMMTDTLGNVPGLRRF
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCC
KDPSWTVGNWISTVFVCALWGAILLMGVTDPLGGINVLFPLFGIANQLLAAIALALVLVV
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVKKGLYKWAWIPAVPLAWDLIVTMTASWQKIFHSDPAIGYWAQNANFRDAKSQGLTEFG
HHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHCCCHHHC
AAKSPEAIDAVIRNTMIQGILSILFAVLVLVVVGAAIAVCIKSIRARAAGTPLETTEEPD
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
TESEFFAPTGFLASSRDKEVQAMWDERYPSGAPVSSGGH
CCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
TIKQTDNINDDDLVYSNATDLPVGVKKSPKMSPTARVGLLVFGVIAAVGWGAIAFSRGE
CCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEECCCC
TINSVWLVLAAVGSYIIAFSFYARLIEYKVVKPKDQRATPAEYVNDGKDYVPTDRRVLFG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCEEEHH
HHFAAIAGAGPLVGPVMAAQMGYLPGTLWIILGVIFAGAVQDYLVLWVSTRRRGRSLGQM
HHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VRDEMGTVGGAAGILATISIMIIIIAVLALIVVNALADSPWGVFSITMTIPIALFMGVYL
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHH
RYLRPGRVTEVSIIGVALLLLAIVAGGWVADTSWGVEWFTWSKTTLALALIGYGIMAAIL
HHHCCCCCHHHHHHHHHHHHHHHHHCCCEECCCCCCEEEEECHHHHHHHHHHHHHHHHHH
PVWLLLAPRDYLSTFMKIGVIGLLAVGILFARPEVQMPSVTSFALEGNGPVFSGSLFPFL
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEECCHHHHHH
FITIACGALSGFHALISSGTTPKLVEKESQMRMLGYGGMLMESFVAMMALITAVILDRHL
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
YFSMNAPLALTGGDPATAAEWVNSIGLTGADITPEQLSEAAESVGESTVISRTGGAPTLA
EEECCCCEEEECCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCHHH
FGMSEILSGFIGGAGMKAFWYHFAIMFEALFILTTVDAGTRVARFMMTDTLGNVPGLRRF
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCC
KDPSWTVGNWISTVFVCALWGAILLMGVTDPLGGINVLFPLFGIANQLLAAIALALVLVV
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVKKGLYKWAWIPAVPLAWDLIVTMTASWQKIFHSDPAIGYWAQNANFRDAKSQGLTEFG
HHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHCCCHHHC
AAKSPEAIDAVIRNTMIQGILSILFAVLVLVVVGAAIAVCIKSIRARAAGTPLETTEEPD
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
TESEFFAPTGFLASSRDKEVQAMWDERYPSGAPVSSGGH
CCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]