Definition Corynebacterium glutamicum R chromosome, complete genome.
Accession NC_009342
Length 3,314,179

Click here to switch to the map view.

The map label for this gene is secE [H]

Identifier: 145294626

GI number: 145294626

Start: 637257

End: 637592

Strand: Direct

Name: secE [H]

Synonym: cgR_0577

Alternate gene names: 145294626

Gene position: 637257-637592 (Clockwise)

Preceding gene: 145294625

Following gene: 145294627

Centisome position: 19.23

GC content: 51.49

Gene sequence:

>336_bases
GTGAGCGACGAGCAGAATTCTGGCGTAGGCGGAACGTCTCGCCCAACGGGTAAACGCCAGCTGTCGGGTGCTTCCACTAC
CTCTACCTCTTCATATGAGGCAAAGCAGGTATCTGCACAGAAGAAGTCATCTGATTCGGATTCTAAGCCTGGTGGCGGTG
TTGTTTCTTTCCTGCCTGAGGTTGTGGGAGAAGTCCGTAAGGTTATTTGGCCTACTGCGCGCCAGATGGTCACGTACACC
CTTGTGGTTTTGGGATTTTTGATTGTTTTGACCGCTTTGGTGTCTGGTGTGGATTTCCTAGCTGGTCTTGGAGTTGAGAA
GATTCTGACTCCGTAG

Upstream 100 bases:

>100_bases
ACTCTCGAAGGTTGAACACAGGGCTGCGATTGTGCTGGATCAAATGTCTGCACGAAAAATTGTTATCGCCCCTGGATGAG
TAGTGATTTAGAGGAGTGCT

Downstream 100 bases:

>100_bases
GTAGGATGTGTAACATCTTTTTTGAAAAGTCCCGCTGGTTCCCTAGAGGAGCCGGCGGGATAATTTTTGCCCAGGTGGTT
GGTTTGGGGCAGCGGTTGCA

Product: preprotein translocase subunit SecE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 111; Mature: 110

Protein sequence:

>111_residues
MSDEQNSGVGGTSRPTGKRQLSGASTTSTSSYEAKQVSAQKKSSDSDSKPGGGVVSFLPEVVGEVRKVIWPTARQMVTYT
LVVLGFLIVLTALVSGVDFLAGLGVEKILTP

Sequences:

>Translated_111_residues
MSDEQNSGVGGTSRPTGKRQLSGASTTSTSSYEAKQVSAQKKSSDSDSKPGGGVVSFLPEVVGEVRKVIWPTARQMVTYT
LVVLGFLIVLTALVSGVDFLAGLGVEKILTP
>Mature_110_residues
SDEQNSGVGGTSRPTGKRQLSGASTTSTSSYEAKQVSAQKKSSDSDSKPGGGVVSFLPEVVGEVRKVIWPTARQMVTYTL
VVLGFLIVLTALVSGVDFLAGLGVEKILTP

Specific function: Essential for protein export [H]

COG id: COG0690

COG function: function code U; Preprotein translocase subunit SecE

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secE/SEC61-gamma family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001901
- InterPro:   IPR005807 [H]

Pfam domain/function: PF00584 SecE [H]

EC number: NA

Molecular weight: Translated: 11546; Mature: 11415

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: PS01067 SECE_SEC61G

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDEQNSGVGGTSRPTGKRQLSGASTTSTSSYEAKQVSAQKKSSDSDSKPGGGVVSFLPE
CCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
VVGEVRKVIWPTARQMVTYTLVVLGFLIVLTALVSGVDFLAGLGVEKILTP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCC
>Mature Secondary Structure 
SDEQNSGVGGTSRPTGKRQLSGASTTSTSSYEAKQVSAQKKSSDSDSKPGGGVVSFLPE
CCCCCCCCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
VVGEVRKVIWPTARQMVTYTLVVLGFLIVLTALVSGVDFLAGLGVEKILTP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11234002 [H]