Definition | Corynebacterium glutamicum R chromosome, complete genome. |
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Accession | NC_009342 |
Length | 3,314,179 |
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The map label for this gene is ubiE [H]
Identifier: 145294623
GI number: 145294623
Start: 632427
End: 633119
Strand: Direct
Name: ubiE [H]
Synonym: cgR_0574
Alternate gene names: 145294623
Gene position: 632427-633119 (Clockwise)
Preceding gene: 145294622
Following gene: 145294625
Centisome position: 19.08
GC content: 56.57
Gene sequence:
>693_bases GTGGCTAAAGCAGATTTAGACAAGGACCCCTTCGACGTAGCGTCAATGTTCGATGACGTCGGAAAGAACTACGATCTCAC TAATACCGTGCTTTCTTTTGGTCAGGACCGTGTGTGGCGAAAGCGCACTAGGCAGCGCCTGGACCTCAAGCCAGGGGAGA AGGTGCTTGATCTAGCTGCAGGAACAGCCGTTTCCACCGTGGAGTTGGCAAAATCCGGCGCGTTTTGTGTGGCGTGTGAT TTCTCCCAGGGCATGCTCGCCGCAGGTAAAGACCGCGATGTGTCCAAGGTTGTGGGCGATGGCATGCAGTTGCCGTTTGC AGACAACAGCTTTGATGCTGTGACCATTTCTTATGGTCTGCGCAATATTCACGATTTCCGCGCTGGCCTGAAAGAAATGG CCCGCGTGACTAAACCTGGTGGACGCCTCACCGTGGCGGAGTTCTCCACCCCCGTGATCCCTGTGTTCGGCACCGTGTAC AAGGAGTACCTCATGCGCCTGCTGCCCCAGGTGGCGCGCGCAGTATCGTCCAACCCGGAGGCCTACATTTACCTGGCTGA TTCCATCCGCGCATGGCCTAGCCAGGCGGAACTAGCACGGGAGATCAACCAGAATGGTTGGTCAGATTGCGGTTGGCAGA ACCTGACCTTCGGCATCGTCGCGCTGCACTCGGCGATTAAACCAGAGAACTAG
Upstream 100 bases:
>100_bases CATTTTGGGTATCGGTTGGTTGTCCGTCGGTGGAGCTAAGGGCGCTAAGCGTCGCAGCCAAATAGCCTCCCACTAAAGCT CCTGGGTTAGACTCGAACGC
Downstream 100 bases:
>100_bases TCGAGTCCCACAGAGGGGAGCCCTTCCGCGCCCAACTAATCGCGGATCCGGCGGCCTGCCAACCCCTGGCGAGCAGGTCT TTATCCTCCTCTGTGATCAG
Product: ubiquinone/menaquinone biosynthesis methyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 230; Mature: 229
Protein sequence:
>230_residues MAKADLDKDPFDVASMFDDVGKNYDLTNTVLSFGQDRVWRKRTRQRLDLKPGEKVLDLAAGTAVSTVELAKSGAFCVACD FSQGMLAAGKDRDVSKVVGDGMQLPFADNSFDAVTISYGLRNIHDFRAGLKEMARVTKPGGRLTVAEFSTPVIPVFGTVY KEYLMRLLPQVARAVSSNPEAYIYLADSIRAWPSQAELAREINQNGWSDCGWQNLTFGIVALHSAIKPEN
Sequences:
>Translated_230_residues MAKADLDKDPFDVASMFDDVGKNYDLTNTVLSFGQDRVWRKRTRQRLDLKPGEKVLDLAAGTAVSTVELAKSGAFCVACD FSQGMLAAGKDRDVSKVVGDGMQLPFADNSFDAVTISYGLRNIHDFRAGLKEMARVTKPGGRLTVAEFSTPVIPVFGTVY KEYLMRLLPQVARAVSSNPEAYIYLADSIRAWPSQAELAREINQNGWSDCGWQNLTFGIVALHSAIKPEN >Mature_229_residues AKADLDKDPFDVASMFDDVGKNYDLTNTVLSFGQDRVWRKRTRQRLDLKPGEKVLDLAAGTAVSTVELAKSGAFCVACDF SQGMLAAGKDRDVSKVVGDGMQLPFADNSFDAVTISYGLRNIHDFRAGLKEMARVTKPGGRLTVAEFSTPVIPVFGTVYK EYLMRLLPQVARAVSSNPEAYIYLADSIRAWPSQAELAREINQNGWSDCGWQNLTFGIVALHSAIKPEN
Specific function: Methyltransferase required for the conversion of dimethylmenaquinone (DMKH2) to menaquinone (MKH2) [H]
COG id: COG2226
COG function: function code H; Methylase involved in ubiquinone/menaquinone biosynthesis
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily. UbiE family [H]
Homologues:
Organism=Homo sapiens, GI116063536, Length=259, Percent_Identity=31.6602316602317, Blast_Score=139, Evalue=2e-33, Organism=Escherichia coli, GI48994983, Length=226, Percent_Identity=37.6106194690265, Blast_Score=158, Evalue=3e-40, Organism=Caenorhabditis elegans, GI17557039, Length=228, Percent_Identity=33.7719298245614, Blast_Score=137, Evalue=4e-33, Organism=Saccharomyces cerevisiae, GI6323526, Length=241, Percent_Identity=30.7053941908714, Blast_Score=104, Evalue=1e-23, Organism=Drosophila melanogaster, GI24641702, Length=239, Percent_Identity=31.3807531380753, Blast_Score=130, Evalue=6e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004033 [H]
Pfam domain/function: PF01209 Ubie_methyltran [H]
EC number: 2.1.1.-
Molecular weight: Translated: 25273; Mature: 25142
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: PS01183 UBIE_1 ; PS01184 UBIE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKADLDKDPFDVASMFDDVGKNYDLTNTVLSFGQDRVWRKRTRQRLDLKPGEKVLDLAA CCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCHHHHHHHHHHHHCCCCCCHHHHHHHC GTAVSTVELAKSGAFCVACDFSQGMLAAGKDRDVSKVVGDGMQLPFADNSFDAVTISYGL CCHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCEEEEEHHH RNIHDFRAGLKEMARVTKPGGRLTVAEFSTPVIPVFGTVYKEYLMRLLPQVARAVSSNPE HHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC AYIYLADSIRAWPSQAELAREINQNGWSDCGWQNLTFGIVALHSAIKPEN EEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCC >Mature Secondary Structure AKADLDKDPFDVASMFDDVGKNYDLTNTVLSFGQDRVWRKRTRQRLDLKPGEKVLDLAA CCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCHHHHHHHHHHHHCCCCCCHHHHHHHC GTAVSTVELAKSGAFCVACDFSQGMLAAGKDRDVSKVVGDGMQLPFADNSFDAVTISYGL CCHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCEEEEEHHH RNIHDFRAGLKEMARVTKPGGRLTVAEFSTPVIPVFGTVYKEYLMRLLPQVARAVSSNPE HHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC AYIYLADSIRAWPSQAELAREINQNGWSDCGWQNLTFGIVALHSAIKPEN EEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferring one-carbon groups; Methyltransferases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12840036 [H]