Definition | Corynebacterium glutamicum R chromosome, complete genome. |
---|---|
Accession | NC_009342 |
Length | 3,314,179 |
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The map label for this gene is ctpB [H]
Identifier: 145294553
GI number: 145294553
Start: 562557
End: 565193
Strand: Direct
Name: ctpB [H]
Synonym: cgR_0504
Alternate gene names: 145294553
Gene position: 562557-565193 (Clockwise)
Preceding gene: 145294552
Following gene: 145294554
Centisome position: 16.97
GC content: 53.62
Gene sequence:
>2637_bases GTGAGCACACCGGATTCTTCCTCGGTGGACAAGGCCGTAAACACTGCTATCTCTGACGCCAAAACAGCGGCGCTCAAGGC AGGTGTTGGATTGAACCGAGCCACCGCCCCAGAAGAAGAGGAAGATTTAAGCTCAAGCATTAAGGTTTCTTTGGCCTTTG AGCTCGAGGGATTAAGCAATGCGCCATCGCTGATGGCGGTTGAGAAAGCTCTAGAAAAGATCCCGGGTGTATCTGCGGAT CTGATCTATCCTTCACAAACTGCTTGGATTACAGCAACTGATCGGGTGCATCCCGAAACCCTCATTGGGGTATTTGAGCA GTTTGGCATCAAAGCGCAGCTTTCTAATTCTTCACTGCTGCGTAGGCATCAACAGCTCAGCGCGGAAGTAAATAGGGAAG CCCGCATTGATCGTTATCGCTCCAGGATGGATGCGAAGCGGATTTCACCGCGGGTGCGTAGACACAACCGTCAAGAAATG GTTCATGCGGTGCGTGCTCGCGAAAGTGGTTGGATTAAACGCATGAATCACACCACCTCGCAGCATGAAGACCCAATGTC AGGTGATGTGCTGTTTACCGCCCGTGCCTTGATTACCCCCATGCGTTTATGGGTGTCACTGCCATTCGCTCTCATTGTGT TGGCATTGTCATTGAATCCTTCGTGGCAGTTCGACTATTGGCAGTGGTTGTCCGCTGTGTTGGCTATTCCTGTGGTGGTG TGGGGCGCGTGGCCGTTTCACCGAGCTGCAGCGGGCGGTATTCGTCGAGGAATTTCTGCCCTCGATGCGACAAGCTCAAT CGCTATTGCTGCTGCGTACGCGTGGTCTATAGCCATGCTGTTGTTTGAAACCCCAGGAAATAAATCGTGGCGTTCTTATC CGTCGTGGTTCGCTTTTAACCACGGCACGTTGACCCAAAACGAAATCTATTTTGATGTGGCCTGCGGAATCACCGTGTTG CTTCTTGGCGGACGGCTGCTGACAAGGCGTCGAAGCCAATCTAGTTTGTTAGCGGAACTTGGTCGCCTCCAAATTGATCC GCAGCGCATTGTGACTGTGGTGCGTAAACACCGATTGAAGCGCGTTGTCCAGGAACTGAATATTCCAGTGCAGGAAGTCC GAGTTAATGACGATGTGAAAGTTCCACCAAATACCACGATTCCAGTAGATGGCACCGTCATCGGTGGTGGTTCGAGGATC GCGGCCAGCATCATCATGGGACAAGACCAGCGTGATGTAAAAGTAAATGACAAAGTTTTCGCCGGCAGCCTCAACCTCGA ATCAGAAATCAAGGTTCGTGTTATTCGCACTGGTCACCGCACCCGCATCGCCGCGGTACATAGGTGGGTTAAACAAGCGA CGCTGCAGGAAAACCGACACAATAGGGCTGCGATCCGTTCGGCAGGCAACCTTGTGCCCATCACCTTCACCCTTGCTGTG GTGGACTTCTGCCTGTGGGCGTTGATCTCTGGAAACATCAACGCTGCTTTTACTACCACCTTGGCAGTTCTTGCATGCGT GGCTCCCGTGGCCTTGGCTCTGTCTGCTCCACTAGCTACGAGAAACTCCATCGAAGCTGCAGCACGACACGGTATTTTGG TCCGGTCCGGTGAAATTTTCCGAGTTCTCGATGATGTGGATACCGCTGTATTCAACCGCGTGGGCACACTAACCGATGGC GAAATGACAGTGGAAACCGTCACCGCAGACAAAGGTGAAGACCCAGAACTAGTGTTGCGTGTAGCCGGAGCTTTGGCCAT GGAATCCCACCACGCGATTTCCAAAGCACTGGTGAAAGCATCTCGTGAAGCTCGTGATACCGGCGCCGGTGGTGAAGATG TCCCACACTGGATTGAAGTAGGCAACGTGGAAATCACCGAAGCCGGCTCATTCCAAGCAACCATCGAGCTGCCACTGATC AAACCATCTGGCGAAAAAATCATGCGCACCACAGAAGCACTCCTGTGGCGACCACGATCCATGACAGAAGTCCGTGAGCA CTTAAGCCCCCGACTAGTGGCAGCAGCAACCTCAGGTGGCGCACCACTGATCGTGCGGTGGAAAGGCAAAGACCGCGGAG TTATCACTCTAAGTGACCACGTGAGATCAGATTCCTCCGATGCGATTATTGCGATTGAAGAACAAGGCATCGAGACCATG ATGCTTTCACGTGATACTTACCCGGTGGCACGTCGATACGCAGACAGCTTAGGCATCACCCACGTCTTGGCCGGCATCGC GCCGGGCAAGAAAGCCCAGGTTGTCCGTGCAGTCCACACCCGCGGATCCACTGTCGCGATGATCGGCGATGAATCAGTAA TGGACTGTTTGAAAGTCGCTGACGTGGGTGTACTGATGGGCGTCGATCGTCCCTCAGAGCTGCGTGATGATTCCGATGAC CCGGCAGCTGACGTTGTGGTCATGCGCGAAGAGGTCATGAGCGTGCCGACGCTGTTTAAACTGGCTCGACGCTACGCCAA GTTGGTCAATGGCAATATTGCTCTGGCCTGGATCTATAACGGTGTTGCCATGGTGGTTGCAGTGTCTGGCTTACTGCATC CAATGGCTGCGACCGTGGCTATGCTGGCGTCTTCGCTGCTTATTGAATGGCGCTCGGGCAGGGCGCGCAAGTACTAA
Upstream 100 bases:
>100_bases TACTTTTTCGCTACCGTGAGTCTTACCGTGAGCCTTATACTGTGAGGACATTAAAAGTGACACCTCTTTTTCTATCCTTT ACAACCCAAGAAGGTTTATC
Downstream 100 bases:
>100_bases CCAGCAATTCCCAAGCCCAAAATCCCTCCCATATCGTTCTTTTTACTGATGCATTGTCCTCAATTAGGTGTGGCTTCTTT TCCTAAATTGGGATAAATGG
Product: hypothetical protein
Products: ADP; Orthophosphate. [C]
Alternate protein names: NA
Number of amino acids: Translated: 878; Mature: 877
Protein sequence:
>878_residues MSTPDSSSVDKAVNTAISDAKTAALKAGVGLNRATAPEEEEDLSSSIKVSLAFELEGLSNAPSLMAVEKALEKIPGVSAD LIYPSQTAWITATDRVHPETLIGVFEQFGIKAQLSNSSLLRRHQQLSAEVNREARIDRYRSRMDAKRISPRVRRHNRQEM VHAVRARESGWIKRMNHTTSQHEDPMSGDVLFTARALITPMRLWVSLPFALIVLALSLNPSWQFDYWQWLSAVLAIPVVV WGAWPFHRAAAGGIRRGISALDATSSIAIAAAYAWSIAMLLFETPGNKSWRSYPSWFAFNHGTLTQNEIYFDVACGITVL LLGGRLLTRRRSQSSLLAELGRLQIDPQRIVTVVRKHRLKRVVQELNIPVQEVRVNDDVKVPPNTTIPVDGTVIGGGSRI AASIIMGQDQRDVKVNDKVFAGSLNLESEIKVRVIRTGHRTRIAAVHRWVKQATLQENRHNRAAIRSAGNLVPITFTLAV VDFCLWALISGNINAAFTTTLAVLACVAPVALALSAPLATRNSIEAAARHGILVRSGEIFRVLDDVDTAVFNRVGTLTDG EMTVETVTADKGEDPELVLRVAGALAMESHHAISKALVKASREARDTGAGGEDVPHWIEVGNVEITEAGSFQATIELPLI KPSGEKIMRTTEALLWRPRSMTEVREHLSPRLVAAATSGGAPLIVRWKGKDRGVITLSDHVRSDSSDAIIAIEEQGIETM MLSRDTYPVARRYADSLGITHVLAGIAPGKKAQVVRAVHTRGSTVAMIGDESVMDCLKVADVGVLMGVDRPSELRDDSDD PAADVVVMREEVMSVPTLFKLARRYAKLVNGNIALAWIYNGVAMVVAVSGLLHPMAATVAMLASSLLIEWRSGRARKY
Sequences:
>Translated_878_residues MSTPDSSSVDKAVNTAISDAKTAALKAGVGLNRATAPEEEEDLSSSIKVSLAFELEGLSNAPSLMAVEKALEKIPGVSAD LIYPSQTAWITATDRVHPETLIGVFEQFGIKAQLSNSSLLRRHQQLSAEVNREARIDRYRSRMDAKRISPRVRRHNRQEM VHAVRARESGWIKRMNHTTSQHEDPMSGDVLFTARALITPMRLWVSLPFALIVLALSLNPSWQFDYWQWLSAVLAIPVVV WGAWPFHRAAAGGIRRGISALDATSSIAIAAAYAWSIAMLLFETPGNKSWRSYPSWFAFNHGTLTQNEIYFDVACGITVL LLGGRLLTRRRSQSSLLAELGRLQIDPQRIVTVVRKHRLKRVVQELNIPVQEVRVNDDVKVPPNTTIPVDGTVIGGGSRI AASIIMGQDQRDVKVNDKVFAGSLNLESEIKVRVIRTGHRTRIAAVHRWVKQATLQENRHNRAAIRSAGNLVPITFTLAV VDFCLWALISGNINAAFTTTLAVLACVAPVALALSAPLATRNSIEAAARHGILVRSGEIFRVLDDVDTAVFNRVGTLTDG EMTVETVTADKGEDPELVLRVAGALAMESHHAISKALVKASREARDTGAGGEDVPHWIEVGNVEITEAGSFQATIELPLI KPSGEKIMRTTEALLWRPRSMTEVREHLSPRLVAAATSGGAPLIVRWKGKDRGVITLSDHVRSDSSDAIIAIEEQGIETM MLSRDTYPVARRYADSLGITHVLAGIAPGKKAQVVRAVHTRGSTVAMIGDESVMDCLKVADVGVLMGVDRPSELRDDSDD PAADVVVMREEVMSVPTLFKLARRYAKLVNGNIALAWIYNGVAMVVAVSGLLHPMAATVAMLASSLLIEWRSGRARKY >Mature_877_residues STPDSSSVDKAVNTAISDAKTAALKAGVGLNRATAPEEEEDLSSSIKVSLAFELEGLSNAPSLMAVEKALEKIPGVSADL IYPSQTAWITATDRVHPETLIGVFEQFGIKAQLSNSSLLRRHQQLSAEVNREARIDRYRSRMDAKRISPRVRRHNRQEMV HAVRARESGWIKRMNHTTSQHEDPMSGDVLFTARALITPMRLWVSLPFALIVLALSLNPSWQFDYWQWLSAVLAIPVVVW GAWPFHRAAAGGIRRGISALDATSSIAIAAAYAWSIAMLLFETPGNKSWRSYPSWFAFNHGTLTQNEIYFDVACGITVLL LGGRLLTRRRSQSSLLAELGRLQIDPQRIVTVVRKHRLKRVVQELNIPVQEVRVNDDVKVPPNTTIPVDGTVIGGGSRIA ASIIMGQDQRDVKVNDKVFAGSLNLESEIKVRVIRTGHRTRIAAVHRWVKQATLQENRHNRAAIRSAGNLVPITFTLAVV DFCLWALISGNINAAFTTTLAVLACVAPVALALSAPLATRNSIEAAARHGILVRSGEIFRVLDDVDTAVFNRVGTLTDGE MTVETVTADKGEDPELVLRVAGALAMESHHAISKALVKASREARDTGAGGEDVPHWIEVGNVEITEAGSFQATIELPLIK PSGEKIMRTTEALLWRPRSMTEVREHLSPRLVAAATSGGAPLIVRWKGKDRGVITLSDHVRSDSSDAIIAIEEQGIETMM LSRDTYPVARRYADSLGITHVLAGIAPGKKAQVVRAVHTRGSTVAMIGDESVMDCLKVADVGVLMGVDRPSELRDDSDDP AADVVVMREEVMSVPTLFKLARRYAKLVNGNIALAWIYNGVAMVVAVSGLLHPMAATVAMLASSLLIEWRSGRARKY
Specific function: Involved In Copper Efflux. [C]
COG id: COG2217
COG function: function code P; Cation transport ATPase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HMA domain [H]
Homologues:
Organism=Homo sapiens, GI55743071, Length=715, Percent_Identity=25.7342657342657, Blast_Score=176, Evalue=1e-43, Organism=Homo sapiens, GI115529486, Length=696, Percent_Identity=24.2816091954023, Blast_Score=160, Evalue=5e-39, Organism=Homo sapiens, GI55743073, Length=553, Percent_Identity=26.7631103074141, Blast_Score=152, Evalue=1e-36, Organism=Escherichia coli, GI1786691, Length=666, Percent_Identity=24.6246246246246, Blast_Score=158, Evalue=1e-39, Organism=Escherichia coli, GI1789879, Length=532, Percent_Identity=23.3082706766917, Blast_Score=67, Evalue=7e-12, Organism=Escherichia coli, GI1786914, Length=441, Percent_Identity=23.1292517006803, Blast_Score=64, Evalue=5e-11, Organism=Caenorhabditis elegans, GI17556548, Length=944, Percent_Identity=23.3050847457627, Blast_Score=146, Evalue=5e-35, Organism=Saccharomyces cerevisiae, GI6320475, Length=679, Percent_Identity=24.8895434462445, Blast_Score=147, Evalue=7e-36, Organism=Saccharomyces cerevisiae, GI6319772, Length=651, Percent_Identity=22.4270353302611, Blast_Score=114, Evalue=6e-26, Organism=Drosophila melanogaster, GI221329854, Length=404, Percent_Identity=25, Blast_Score=98, Evalue=3e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008250 - InterPro: IPR006403 - InterPro: IPR000579 - InterPro: IPR006416 - InterPro: IPR001757 - InterPro: IPR018303 - InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR017969 - InterPro: IPR006121 [H]
Pfam domain/function: PF00122 E1-E2_ATPase; PF00403 HMA; PF00702 Hydrolase [H]
EC number: 3.6.3.4 [C]
Molecular weight: Translated: 95828; Mature: 95697
Theoretical pI: Translated: 9.69; Mature: 9.69
Prosite motif: PS50846 HMA_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTPDSSSVDKAVNTAISDAKTAALKAGVGLNRATAPEEEEDLSSSIKVSLAFELEGLSN CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCEEEEEEEEECCCCC APSLMAVEKALEKIPGVSADLIYPSQTAWITATDRVHPETLIGVFEQFGIKAQLSNSSLL CCHHHHHHHHHHHCCCCCEEEECCCCCEEEEECCCCCHHHHHHHHHHHCCEEEECCHHHH RRHQQLSAEVNREARIDRYRSRMDAKRISPRVRRHNRQEMVHAVRARESGWIKRMNHTTS HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHCCHHHHHCCCCC QHEDPMSGDVLFTARALITPMRLWVSLPFALIVLALSLNPSWQFDYWQWLSAVLAIPVVV CCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH WGAWPFHRAAAGGIRRGISALDATSSIAIAAAYAWSIAMLLFETPGNKSWRSYPSWFAFN HCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEEECCCCCCCCCCCCEEEEC HGTLTQNEIYFDVACGITVLLLGGRLLTRRRSQSSLLAELGRLQIDPQRIVTVVRKHRLK CCCCCCCCEEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH RVVQELNIPVQEVRVNDDVKVPPNTTIPVDGTVIGGGSRIAASIIMGQDQRDVKVNDKVF HHHHHHCCCHHHEECCCCCCCCCCCCCCCCCEEECCCHHHHHHHHCCCCCCCCEECCEEE AGSLNLESEIKVRVIRTGHRTRIAAVHRWVKQATLQENRHNRAAIRSAGNLVPITFTLAV EECCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCEEEHHHHHHH VDFCLWALISGNINAAFTTTLAVLACVAPVALALSAPLATRNSIEAAARHGILVRSGEIF HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCEEEECCCEE RVLDDVDTAVFNRVGTLTDGEMTVETVTADKGEDPELVLRVAGALAMESHHAISKALVKA EHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH SREARDTGAGGEDVPHWIEVGNVEITEAGSFQATIELPLIKPSGEKIMRTTEALLWRPRS HHHHHCCCCCCCCCCCCEEECCEEEEECCCEEEEEEEEEECCCCHHHHHHHHHHHCCCCC MTEVREHLSPRLVAAATSGGAPLIVRWKGKDRGVITLSDHVRSDSSDAIIAIEEQGIETM HHHHHHHCCCEEEEEECCCCCEEEEEECCCCCCEEEEECCCCCCCCCEEEEEECCCCEEE MLSRDTYPVARRYADSLGITHVLAGIAPGKKAQVVRAVHTRGSTVAMIGDESVMDCLKVA EECCCCCHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHCCCCEEEEECCHHHHHHHHHH DVGVLMGVDRPSELRDDSDDPAADVVVMREEVMSVPTLFKLARRYAKLVNGNIALAWIYN HHHHEEECCCCHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEEHHH GVAMVVAVSGLLHPMAATVAMLASSLLIEWRSGRARKY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure STPDSSSVDKAVNTAISDAKTAALKAGVGLNRATAPEEEEDLSSSIKVSLAFELEGLSN CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCEEEEEEEEECCCCC APSLMAVEKALEKIPGVSADLIYPSQTAWITATDRVHPETLIGVFEQFGIKAQLSNSSLL CCHHHHHHHHHHHCCCCCEEEECCCCCEEEEECCCCCHHHHHHHHHHHCCEEEECCHHHH RRHQQLSAEVNREARIDRYRSRMDAKRISPRVRRHNRQEMVHAVRARESGWIKRMNHTTS HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHCCHHHHHCCCCC QHEDPMSGDVLFTARALITPMRLWVSLPFALIVLALSLNPSWQFDYWQWLSAVLAIPVVV CCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH WGAWPFHRAAAGGIRRGISALDATSSIAIAAAYAWSIAMLLFETPGNKSWRSYPSWFAFN HCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEEECCCCCCCCCCCCEEEEC HGTLTQNEIYFDVACGITVLLLGGRLLTRRRSQSSLLAELGRLQIDPQRIVTVVRKHRLK CCCCCCCCEEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH RVVQELNIPVQEVRVNDDVKVPPNTTIPVDGTVIGGGSRIAASIIMGQDQRDVKVNDKVF HHHHHHCCCHHHEECCCCCCCCCCCCCCCCCEEECCCHHHHHHHHCCCCCCCCEECCEEE AGSLNLESEIKVRVIRTGHRTRIAAVHRWVKQATLQENRHNRAAIRSAGNLVPITFTLAV EECCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCEEEHHHHHHH VDFCLWALISGNINAAFTTTLAVLACVAPVALALSAPLATRNSIEAAARHGILVRSGEIF HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCEEEECCCEE RVLDDVDTAVFNRVGTLTDGEMTVETVTADKGEDPELVLRVAGALAMESHHAISKALVKA EHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH SREARDTGAGGEDVPHWIEVGNVEITEAGSFQATIELPLIKPSGEKIMRTTEALLWRPRS HHHHHCCCCCCCCCCCCEEECCEEEEECCCEEEEEEEEEECCCCHHHHHHHHHHHCCCCC MTEVREHLSPRLVAAATSGGAPLIVRWKGKDRGVITLSDHVRSDSSDAIIAIEEQGIETM HHHHHHHCCCEEEEEECCCCCEEEEEECCCCCCEEEEECCCCCCCCCEEEEEECCCCEEE MLSRDTYPVARRYADSLGITHVLAGIAPGKKAQVVRAVHTRGSTVAMIGDESVMDCLKVA EECCCCCHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHCCCCEEEEECCHHHHHHHHHH DVGVLMGVDRPSELRDDSDDPAADVVVMREEVMSVPTLFKLARRYAKLVNGNIALAWIYN HHHHEEECCCCHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEEHHH GVAMVVAVSGLLHPMAATVAMLASSLLIEWRSGRARKY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Cu [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; H2O [C]
Specific reaction: ATP + H2O = ADP + Orthophosphate. [C]
General reaction: Phosphorous acid anhydride hydrolysis [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7476188; 11234002 [H]