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The map label for this gene is yfiY [H]

Identifier: 145294464

GI number: 145294464

Start: 457571

End: 458518

Strand: Direct

Name: yfiY [H]

Synonym: cgR_0419

Alternate gene names: 145294464

Gene position: 457571-458518 (Clockwise)

Preceding gene: 145294459

Following gene: 145294470

Centisome position: 13.81

GC content: 51.27

Gene sequence:

>948_bases
ATGCATTTTTGTCTCCTGTCTCTGGCCAGACCTGCCAAAGTTGTGGCCCCACTCCTCGGCGCCGCACTGCTTCTAAGCTC
CTGCTCTTCAACATCTTCCGATGAACCAATCCAACCTGAAGTTGCCAGCACTGGATATTCAGTGGAACACGCAATGGGCA
CCACCGAAATCCCTGAAACTCCAAAGCGAGTAGTCGTCATTGACTCCCCACACCTCGACGCACTTTTGGCTTTGGGAATC
ACTCCAGTCGGAGCTACGGAATCTGGATCCGAAAACGGTTTTCCGACCTACCTGGCAGATGAGCTGAAGGACACTGAATC
AGTCGGTCTGACTTCTGAGCCAAACTTGGAGAAGATCGCTGCCCTCGATCCTGATTTGATCATCGGCGCAAAGGTCCGCC
ATGAGGCCATCTATGATCAGCTTTCAGACATCGCACCAACCGTGATGTCCGAAGGTTCCGGTACAAACTGGAATGAACAG
GCTGAAATCACCGCGGCGGCAGTGAACAAATCTGATGAGATGGACAAACTAATCGCAGATTTGGATACCCGCGCGAAGGA
TCTCGGGGAAGAGATCGGGGCGGAGGGGCAAACTGCATCGATGGTTCGATTCCGTCCCGATAATTTCAGGCTCTATGGTC
CTGAGACGTTCTCTGGTTCAGTTCTGGAACAAGTTGGCTTTGACCTGGGGGAACGTGATTGGAATGAGTACTCCATGATG
GAACTCTCCCCGGAAAACTTTGGTCAGATCGATGGCGATCTTATTTTCTACACCATCCCAGGATCTCCTGAAGCAACTAC
TTATCCGCAGGTGTCAGAGTTGTGGGTAGATTCGCCGGCAGTTCAGCAAGGTAAAACTTACGAGTTTGAGGATGAAACCT
GGATGGTCGGCATTGGTGTTCTAGGTGCCAATGAAATCTTGGACGATCTGGAAGAAACTCTGAGCTAG

Upstream 100 bases:

>100_bases
TAGGGGGCTTGCAAGGCGGGACTCATGCCGGGGGTATGCCTTGGGGCAGTTATTAAGGATAACCTTGCCTTAATTATTTG
GATTGCAGTAATTTAAATGA

Downstream 100 bases:

>100_bases
TTTCCTTTCGACCATGCAACCCCTTGCCGTTGTCCCTCCGCATATTAGGAGAGTGTCGATACGGAGGGGTTCTTCATGTT
CGAAGATCTGTCTTCGAAGC

Product: hypothetical protein

Products: ADP; phosphate; iron dicitrate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 315; Mature: 315

Protein sequence:

>315_residues
MHFCLLSLARPAKVVAPLLGAALLLSSCSSTSSDEPIQPEVASTGYSVEHAMGTTEIPETPKRVVVIDSPHLDALLALGI
TPVGATESGSENGFPTYLADELKDTESVGLTSEPNLEKIAALDPDLIIGAKVRHEAIYDQLSDIAPTVMSEGSGTNWNEQ
AEITAAAVNKSDEMDKLIADLDTRAKDLGEEIGAEGQTASMVRFRPDNFRLYGPETFSGSVLEQVGFDLGERDWNEYSMM
ELSPENFGQIDGDLIFYTIPGSPEATTYPQVSELWVDSPAVQQGKTYEFEDETWMVGIGVLGANEILDDLEETLS

Sequences:

>Translated_315_residues
MHFCLLSLARPAKVVAPLLGAALLLSSCSSTSSDEPIQPEVASTGYSVEHAMGTTEIPETPKRVVVIDSPHLDALLALGI
TPVGATESGSENGFPTYLADELKDTESVGLTSEPNLEKIAALDPDLIIGAKVRHEAIYDQLSDIAPTVMSEGSGTNWNEQ
AEITAAAVNKSDEMDKLIADLDTRAKDLGEEIGAEGQTASMVRFRPDNFRLYGPETFSGSVLEQVGFDLGERDWNEYSMM
ELSPENFGQIDGDLIFYTIPGSPEATTYPQVSELWVDSPAVQQGKTYEFEDETWMVGIGVLGANEILDDLEETLS
>Mature_315_residues
MHFCLLSLARPAKVVAPLLGAALLLSSCSSTSSDEPIQPEVASTGYSVEHAMGTTEIPETPKRVVVIDSPHLDALLALGI
TPVGATESGSENGFPTYLADELKDTESVGLTSEPNLEKIAALDPDLIIGAKVRHEAIYDQLSDIAPTVMSEGSGTNWNEQ
AEITAAAVNKSDEMDKLIADLDTRAKDLGEEIGAEGQTASMVRFRPDNFRLYGPETFSGSVLEQVGFDLGERDWNEYSMM
ELSPENFGQIDGDLIFYTIPGSPEATTYPQVSELWVDSPAVQQGKTYEFEDETWMVGIGVLGANEILDDLEETLS

Specific function: Part of the ABC transporter complex yfiYZ/yfhA/yusV involved in import of the iron-hydroxamate siderophores schizokinen, arthrobactin and corprogen. Binds the siderophores and delivers them to the surface of yfiZ/yfhA (Probable) [H]

COG id: COG0614

COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable). Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082411, Length=266, Percent_Identity=26.6917293233083, Blast_Score=94, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002491 [H]

Pfam domain/function: PF01497 Peripla_BP_2 [H]

EC number: NA

Molecular weight: Translated: 33982; Mature: 33982

Theoretical pI: Translated: 3.81; Mature: 3.81

Prosite motif: PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHFCLLSLARPAKVVAPLLGAALLLSSCSSTSSDEPIQPEVASTGYSVEHAMGTTEIPET
CCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCHHHHCCCCCCCCC
PKRVVVIDSPHLDALLALGITPVGATESGSENGFPTYLADELKDTESVGLTSEPNLEKIA
CCEEEEECCCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCHHHCCCCCCCCHHHHH
ALDPDLIIGAKVRHEAIYDQLSDIAPTVMSEGSGTNWNEQAEITAAAVNKSDEMDKLIAD
HCCCCEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCHHHHHHHHH
LDTRAKDLGEEIGAEGQTASMVRFRPDNFRLYGPETFSGSVLEQVGFDLGERDWNEYSMM
HHHHHHHHHHHHCCCCCCCEEEEECCCCEEEECCCCCCCHHHHHHCCCCCCCCCCCEEEE
ELSPENFGQIDGDLIFYTIPGSPEATTYPQVSELWVDSPAVQQGKTYEFEDETWMVGIGV
EECCHHCCCCCCCEEEEECCCCCCCCCCCCHHHHHCCCCHHHCCCCEEECCCEEEEEEEE
LGANEILDDLEETLS
CCHHHHHHHHHHHHC
>Mature Secondary Structure
MHFCLLSLARPAKVVAPLLGAALLLSSCSSTSSDEPIQPEVASTGYSVEHAMGTTEIPET
CCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCHHHHCCCCCCCCC
PKRVVVIDSPHLDALLALGITPVGATESGSENGFPTYLADELKDTESVGLTSEPNLEKIA
CCEEEEECCCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCHHHCCCCCCCCHHHHH
ALDPDLIIGAKVRHEAIYDQLSDIAPTVMSEGSGTNWNEQAEITAAAVNKSDEMDKLIAD
HCCCCEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCHHHHHHHHH
LDTRAKDLGEEIGAEGQTASMVRFRPDNFRLYGPETFSGSVLEQVGFDLGERDWNEYSMM
HHHHHHHHHHHHCCCCCCCEEEEECCCCEEEECCCCCCCHHHHHHCCCCCCCCCCCEEEE
ELSPENFGQIDGDLIFYTIPGSPEATTYPQVSELWVDSPAVQQGKTYEFEDETWMVGIGV
EECCHHCCCCCCCEEEEECCCCCCCCCCCCHHHHHCCCCHHHCCCCEEECCCEEEEEEEE
LGANEILDDLEETLS
CCHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; iron dicitrate [Periplasm]; H2O [C]

Specific reaction: ATP + iron dicitrate [Periplasm] + H2O = ADP + phosphate + iron dicitrate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8946165; 9384377 [H]