| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
Click here to switch to the map view.
The map label for this gene is bgxA [H]
Identifier: 145294447
GI number: 145294447
Start: 437648
End: 439684
Strand: Direct
Name: bgxA [H]
Synonym: cgR_0402
Alternate gene names: 145294447
Gene position: 437648-439684 (Clockwise)
Preceding gene: 145294446
Following gene: 145294448
Centisome position: 13.21
GC content: 55.67
Gene sequence:
>2037_bases ATGTCTCAAGAGCAGCCTCAAATCGGCTCCCGCCTCTCTCGTGTCATTGAACAAGACGGCCTACAATTCCGCGATCTCGA CGGCGACGGCGTACTTGCACCTTATGAAGATTGGCGGCTAACCCCAGCAGAGCGTGCCGCTGACCTGGTGAAACGTATGA ATGTGGAAGAAAAAGCGGGCCTGATGATCATCGGTTCGCACTATCCCGGATACTCGCCTTTGGCGCCGGAGAGTGAAGGC AAGGACGCGGAAAAGTGCGAGCCTTTGCTGAACCCTGTCGATATGTGGCGTGAGGATAACCCGATCACGGGTGTTCCTTT CACCGAGCCTGTGCTGGCAACTTCTTCCACTGAAAATGCCATTAACCTGCGCAATCAGCGTTACTTAATTGTTCGTGACA ACCTGCCAGCTCGTGAGCTTGCTACTTGGACCAATGCTGTTCAGGAAGTCGCGGAGCGTTCCCGTTTGGGTATTCCTGTT GTGTTTGCGTCGAATCCTCGTAACCACGTCGCGCTCGTTGCGCAGTTCGGTGTGAACGAGTCCGCGGGTGTGTTCTCTGA GTGGCCTGGCGAGCTGGGTCTTGCTGCGCTTCGCGATGCTGAGCTGATGGAGACTTTCGGTACCGAGGCTGCTAAAGAAT GGCGTGCCGGTGGTGTGCACAAGCTGTACGGTTACATGGCTGACCTCGCTTCTGAGCCTCGTTGGTCCCGCTTCAACGGT ACTTTTGGTGAGGATCCGGAGTTGATCTCTGATTACATCGCTGCTGTTGTGCGTGGTTTGCAGGGCCCTGAGCTGTCCAA GAATTCCGTGTCGACCACCATTAAGCACTTCCCAGGTGGCGGCGTGCGCCTCGACGGCCACGATCCTCACTTCCACTGGG GTCAGACCAATGAGTACCCAACCGAAGATGCGCTGGGCAAGTACCATCTGCCTCCTTTCCAGGCAGCTATCGACGCTGGC TGCGCCTCGATCATGCCTTACTACGCACGGCCAATGAACAACTCCGCCAACCAGCTCGATCAGCAACTGTGGCAAAACCC GACCACGCAGTTCGAAGAGGTTGCGTTTGCCTACAACCGCGCCTTCATTCAGGATTTGCTTCGCGACGCCATGGGCCACC GTGGGTACGTCAACTCCGACTCCGGCGTCATCGACGCCATGATGTGGGGCGTGGAGGAACTCAGCGAGCCAGAACGCTTC GCCGCAGCAGTGCGTGCAGGCACCGACATTTTCTCCGACATGGCTAACCCACGTCGACTGCTCGAAGCAGTTGCTGAGGG ACACCTTGATGAGTCAGAGCTGAATCAGCCAGTCCAGCGACTCCTGGAGGAAATCTTCCAGCTTGGTCTGTTTGAGAACC CATACGTCTCTGAAGATGAAGCAGAAAAGATCATTGGTGCGCCAGAGGTTTCTGCATTGGGCAACAAAGCACAGCTTGAT TCCGTCACCTTGCTGCGTAACAACCCATCCGTGCTGCCACTGGATCCTGCAGCAAGCCTGAAGATCTACCCATTGGTTAC TGGCCGTACCAAGATCGACGAGGTTCAACTACAGCTGGAAGCTGCCATCCGCGCAGAACTCCCAGGGGTAACCTTGGTGT CTTCCGAGTCAGAAGCAGATCTTGCAATCGTGTGGGCTCGCCCTGAAATTGCACTGTTTGAAGATGACCTCGAAGGTGTT TCCCTCTCTGTTGACCCTCGTGCCAACGGTGTCGATGTGGAACGCGTTCAGGCTGTAGAAGCTGCAGTCCCAACCATTTT GGCTGTGAACTTCACCAACCCTTGGGTGCTGTCTGAGATCGAGCCTGGTGCCGCTGCCGTGGTGGGCACTTTTGAGATCA AGCCAGAGTTCCTTCTCAAGGCTTTGACTGGTCAAGAGGGAGGGCCAAAGGGCAAGCTACCATTGACTGTTCCTGCTTCT ATGCAGGCGATTGCTGATTCTCCTCGCGATATCCCAGGCAAGTTCCTCGATGAGTCTTACACCTACGTGGACTCCGCAGG GATGGCCTACAAGTACGGTCACGGACTTAATTTCTAG
Upstream 100 bases:
>100_bases ATTGTCTAACCCCGTATAGGTGAGAAATGTTGGACAAGTGTCTGTTTTTGTGGGGGAAATCTGACTACGATGGTAAGAAA TAAGGAAAGGGATTACCATT
Downstream 100 bases:
>100_bases ATTGTAGGTAGTCTCGTGGGCACAACTGAAATCTTATTGAAAAGGAGTGTCCATGAGCACTGTCGTGCCTGGAATTGTCG CCCTGTCCAAGGGTGCACCG
Product: hypothetical protein
Products: NA
Alternate protein names: Beta-glucosidase; Cellobiase; Gentiobiase; Beta-xylosidase; 1,4-beta-D-xylan xylohydrolase; Xylan 1,4-beta-xylosidase [H]
Number of amino acids: Translated: 678; Mature: 677
Protein sequence:
>678_residues MSQEQPQIGSRLSRVIEQDGLQFRDLDGDGVLAPYEDWRLTPAERAADLVKRMNVEEKAGLMIIGSHYPGYSPLAPESEG KDAEKCEPLLNPVDMWREDNPITGVPFTEPVLATSSTENAINLRNQRYLIVRDNLPARELATWTNAVQEVAERSRLGIPV VFASNPRNHVALVAQFGVNESAGVFSEWPGELGLAALRDAELMETFGTEAAKEWRAGGVHKLYGYMADLASEPRWSRFNG TFGEDPELISDYIAAVVRGLQGPELSKNSVSTTIKHFPGGGVRLDGHDPHFHWGQTNEYPTEDALGKYHLPPFQAAIDAG CASIMPYYARPMNNSANQLDQQLWQNPTTQFEEVAFAYNRAFIQDLLRDAMGHRGYVNSDSGVIDAMMWGVEELSEPERF AAAVRAGTDIFSDMANPRRLLEAVAEGHLDESELNQPVQRLLEEIFQLGLFENPYVSEDEAEKIIGAPEVSALGNKAQLD SVTLLRNNPSVLPLDPAASLKIYPLVTGRTKIDEVQLQLEAAIRAELPGVTLVSSESEADLAIVWARPEIALFEDDLEGV SLSVDPRANGVDVERVQAVEAAVPTILAVNFTNPWVLSEIEPGAAAVVGTFEIKPEFLLKALTGQEGGPKGKLPLTVPAS MQAIADSPRDIPGKFLDESYTYVDSAGMAYKYGHGLNF
Sequences:
>Translated_678_residues MSQEQPQIGSRLSRVIEQDGLQFRDLDGDGVLAPYEDWRLTPAERAADLVKRMNVEEKAGLMIIGSHYPGYSPLAPESEG KDAEKCEPLLNPVDMWREDNPITGVPFTEPVLATSSTENAINLRNQRYLIVRDNLPARELATWTNAVQEVAERSRLGIPV VFASNPRNHVALVAQFGVNESAGVFSEWPGELGLAALRDAELMETFGTEAAKEWRAGGVHKLYGYMADLASEPRWSRFNG TFGEDPELISDYIAAVVRGLQGPELSKNSVSTTIKHFPGGGVRLDGHDPHFHWGQTNEYPTEDALGKYHLPPFQAAIDAG CASIMPYYARPMNNSANQLDQQLWQNPTTQFEEVAFAYNRAFIQDLLRDAMGHRGYVNSDSGVIDAMMWGVEELSEPERF AAAVRAGTDIFSDMANPRRLLEAVAEGHLDESELNQPVQRLLEEIFQLGLFENPYVSEDEAEKIIGAPEVSALGNKAQLD SVTLLRNNPSVLPLDPAASLKIYPLVTGRTKIDEVQLQLEAAIRAELPGVTLVSSESEADLAIVWARPEIALFEDDLEGV SLSVDPRANGVDVERVQAVEAAVPTILAVNFTNPWVLSEIEPGAAAVVGTFEIKPEFLLKALTGQEGGPKGKLPLTVPAS MQAIADSPRDIPGKFLDESYTYVDSAGMAYKYGHGLNF >Mature_677_residues SQEQPQIGSRLSRVIEQDGLQFRDLDGDGVLAPYEDWRLTPAERAADLVKRMNVEEKAGLMIIGSHYPGYSPLAPESEGK DAEKCEPLLNPVDMWREDNPITGVPFTEPVLATSSTENAINLRNQRYLIVRDNLPARELATWTNAVQEVAERSRLGIPVV FASNPRNHVALVAQFGVNESAGVFSEWPGELGLAALRDAELMETFGTEAAKEWRAGGVHKLYGYMADLASEPRWSRFNGT FGEDPELISDYIAAVVRGLQGPELSKNSVSTTIKHFPGGGVRLDGHDPHFHWGQTNEYPTEDALGKYHLPPFQAAIDAGC ASIMPYYARPMNNSANQLDQQLWQNPTTQFEEVAFAYNRAFIQDLLRDAMGHRGYVNSDSGVIDAMMWGVEELSEPERFA AAVRAGTDIFSDMANPRRLLEAVAEGHLDESELNQPVQRLLEEIFQLGLFENPYVSEDEAEKIIGAPEVSALGNKAQLDS VTLLRNNPSVLPLDPAASLKIYPLVTGRTKIDEVQLQLEAAIRAELPGVTLVSSESEADLAIVWARPEIALFEDDLEGVS LSVDPRANGVDVERVQAVEAAVPTILAVNFTNPWVLSEIEPGAAAVVGTFEIKPEFLLKALTGQEGGPKGKLPLTVPASM QAIADSPRDIPGKFLDESYTYVDSAGMAYKYGHGLNF
Specific function: Exhibits both beta-glucosidase and beta-xylosidase activities [H]
COG id: COG1472
COG function: function code G; Beta-glucosidase-related glycosidases
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 3 family [H]
Homologues:
Organism=Escherichia coli, GI1788453, Length=608, Percent_Identity=24.5065789473684, Blast_Score=103, Evalue=3e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002772 - InterPro: IPR001764 - InterPro: IPR017853 [H]
Pfam domain/function: PF00933 Glyco_hydro_3; PF01915 Glyco_hydro_3_C [H]
EC number: =3.2.1.21; =3.2.1.37 [H]
Molecular weight: Translated: 74310; Mature: 74179
Theoretical pI: Translated: 4.30; Mature: 4.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQEQPQIGSRLSRVIEQDGLQFRDLDGDGVLAPYEDWRLTPAERAADLVKRMNVEEKAG CCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHCC LMIIGSHYPGYSPLAPESEGKDAEKCEPLLNPVDMWREDNPITGVPFTEPVLATSSTENA EEEEECCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHCCCCCCCCCCCCCCEEECCCCCCC INLRNQRYLIVRDNLPARELATWTNAVQEVAERSRLGIPVVFASNPRNHVALVAQFGVNE EEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEECCCCC SAGVFSEWPGELGLAALRDAELMETFGTEAAKEWRAGGVHKLYGYMADLASEPRWSRFNG CCCCHHCCCCHHHHHHHHHHHHHHHHCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCC TFGEDPELISDYIAAVVRGLQGPELSKNSVSTTIKHFPGGGVRLDGHDPHFHWGQTNEYP CCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCC TEDALGKYHLPPFQAAIDAGCASIMPYYARPMNNSANQLDQQLWQNPTTQFEEVAFAYNR CHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHH AFIQDLLRDAMGHRGYVNSDSGVIDAMMWGVEELSEPERFAAAVRAGTDIFSDMANPRRL HHHHHHHHHHHCCCCCCCCCCCHHHHHHHCHHHHCCHHHHHHHHHHHHHHHHHCCCHHHH LEAVAEGHLDESELNQPVQRLLEEIFQLGLFENPYVSEDEAEKIIGAPEVSALGNKAQLD HHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCHHHCCCCHHCC SVTLLRNNPSVLPLDPAASLKIYPLVTGRTKIDEVQLQLEAAIRAELPGVTLVSSESEAD EEEEEECCCCEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCC LAIVWARPEIALFEDDLEGVSLSVDPRANGVDVERVQAVEAAVPTILAVNFTNPWVLSEI EEEEEECCCEEEEECCCCCCEEEECCCCCCCCHHHHHHHHHHCCEEEEEECCCCEEEECC EPGAAAVVGTFEIKPEFLLKALTGQEGGPKGKLPLTVPASMQAIADSPRDIPGKFLDESY CCCCEEEEEEEECCHHHHHHHHHCCCCCCCCCCEEECCCHHHHHHCCCCCCCHHHHCCCC TYVDSAGMAYKYGHGLNF CEECCCCCEEECCCCCCC >Mature Secondary Structure SQEQPQIGSRLSRVIEQDGLQFRDLDGDGVLAPYEDWRLTPAERAADLVKRMNVEEKAG CCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHCC LMIIGSHYPGYSPLAPESEGKDAEKCEPLLNPVDMWREDNPITGVPFTEPVLATSSTENA EEEEECCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHCCCCCCCCCCCCCCEEECCCCCCC INLRNQRYLIVRDNLPARELATWTNAVQEVAERSRLGIPVVFASNPRNHVALVAQFGVNE EEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEECCCCC SAGVFSEWPGELGLAALRDAELMETFGTEAAKEWRAGGVHKLYGYMADLASEPRWSRFNG CCCCHHCCCCHHHHHHHHHHHHHHHHCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCC TFGEDPELISDYIAAVVRGLQGPELSKNSVSTTIKHFPGGGVRLDGHDPHFHWGQTNEYP CCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCC TEDALGKYHLPPFQAAIDAGCASIMPYYARPMNNSANQLDQQLWQNPTTQFEEVAFAYNR CHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHH AFIQDLLRDAMGHRGYVNSDSGVIDAMMWGVEELSEPERFAAAVRAGTDIFSDMANPRRL HHHHHHHHHHHCCCCCCCCCCCHHHHHHHCHHHHCCHHHHHHHHHHHHHHHHHCCCHHHH LEAVAEGHLDESELNQPVQRLLEEIFQLGLFENPYVSEDEAEKIIGAPEVSALGNKAQLD HHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCHHHCCCCHHCC SVTLLRNNPSVLPLDPAASLKIYPLVTGRTKIDEVQLQLEAAIRAELPGVTLVSSESEAD EEEEEECCCCEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCC LAIVWARPEIALFEDDLEGVSLSVDPRANGVDVERVQAVEAAVPTILAVNFTNPWVLSEI EEEEEECCCEEEEECCCCCCEEEECCCCCCCCHHHHHHHHHHCCEEEEEECCCCEEEECC EPGAAAVVGTFEIKPEFLLKALTGQEGGPKGKLPLTVPASMQAIADSPRDIPGKFLDESY CCCCEEEEEEEECCHHHHHHHHHCCCCCCCCCCEEECCCHHHHHHCCCCCCCHHHHCCCC TYVDSAGMAYKYGHGLNF CEECCCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7891660 [H]