Definition | Corynebacterium glutamicum R chromosome, complete genome. |
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Accession | NC_009342 |
Length | 3,314,179 |
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The map label for this gene is 145294427
Identifier: 145294427
GI number: 145294427
Start: 415286
End: 416482
Strand: Direct
Name: 145294427
Synonym: cgR_0382
Alternate gene names: NA
Gene position: 415286-416482 (Clockwise)
Preceding gene: 145294426
Following gene: 145294431
Centisome position: 12.53
GC content: 58.98
Gene sequence:
>1197_bases TTGTTGAGCCCCAGCCTGGTCGTCGATGCCGTCATCGTCCTCGTTATGGCATTCGCCCTGTGGGGTGGTTGGCGTCAAGG CGCCTTCACCTCGCTGCTGTCCACCGTCGGCGTCGTTTCTGGACTGGTAGTTGGCGCAGCAGCAGCCCCGTTTGTCATGG GTCTCACCGATTCCACAGCGCTTCGTTTCTTACTGGCAATCGGCACCGTGGTGCTGCTGGTTGGCTTGGGAAATCTCATC GGTGCTCATTTGGGTGCTGCAATCAGGGACAACATCAAATTTCGGAGTTCAAGGACTTTAGACTCCGGACTCGGCGCCAT TTTCCAAGTGTTAGCCACCTTGATCGTGGTGTGGCTCGTCGCGATTCCCTTGGCCACAGGCCTTCCCGGAACCGTCGCCA GCGGAATCAGAGACTCCCGCATCCTGGGCTTTGTAGACAAATACACCCCGCAAGGCCTAGATACCCTGCCCTCCAAAATC GCTGCGATGCTCAGCGAATCCGGCCTCCCACCACTGATTTCCCCCTTCACCGGCGGATCCTCGGTGGAAGTGGACGCCCC CGAAATCAACGTCACCAACGTTGACCTAGTCGAAGCGATGCGCCCGTCCGTCATCCACGTGATGGGTGACGCCCAAGAAT GCAGCCGCCGACTCATGGGGTCCGGATTCGTGGCATCCCCCGACTACGTGGTGACCAACGCCCACGTTGTTGCAGGTACC TCCACCGTCAGCCTGGATACCATGATCGGAACCCGCTCCGCAGAGGTAGTGTTCTACGACCCGAACCTGGACATCGCAGT CCTTTACAGCCCTGACCTCGGCTTGGATCCACTGCCGTGGGCATCCACTCCGCTAGACACTGGCGATGAAGCAATCGTCA TGGGATTCCCACAGTCCGGACCTTTCAACGCCTCCCCAGCCAGGGTCCGCGAACGCATCATGATCACCGGCAGCAACATT TACGCCAACGGCCAGCACGAACGCGAAGCCTATTCAGTCCGCGGATCCATCCAATCTGGAAACTCCGGCGGCCCAATGGC CAACGAAATGGGCGAAGTAGTGGGTGTTGTCTTCGGCGCAGCGATCGACGGCTCCGATACCGGTTACGTTCTCACTGCCG AAGAGGTACAGGAGCGAATTGGTGATATCACCTCGCTGACCCAGCCTGTCGATACGATGCAGTGCGCGGTTTCTTGA
Upstream 100 bases:
>100_bases TATGCGTTAGGCTGACGGGCTCCGGTGGCCTAAAATCGAAGCGATCTAAAAATTTGGCAGTTAATATTATCGATTTTCGA AAGCGTAGAACACCAAACCA
Downstream 100 bases:
>100_bases TCGTAGGAGCTAAGACCAGACAGGGATGCCCACGTTTGCGGAATTCGCAGTGCGTGGGCAGTGTGGTTTGGTTTTGGGGG CTCGGAACCGGTCACAGATG
Product: hypothetical protein
Products: NA
Alternate protein names: Colicin V Production Protein; Peptidase S1 And S6 Chymotrypsin/Hap; Membrane-Associated Serine Protease; Trypsin-Like Serine Protease; Protease; Peptidase; Serine Peptidase; 2-Alkenal Reductase; Serine Proteinase; Trypsin-Like Serine Protease With C-Terminal PDZ Domain; S1C Family Peptidase
Number of amino acids: Translated: 398; Mature: 398
Protein sequence:
>398_residues MLSPSLVVDAVIVLVMAFALWGGWRQGAFTSLLSTVGVVSGLVVGAAAAPFVMGLTDSTALRFLLAIGTVVLLVGLGNLI GAHLGAAIRDNIKFRSSRTLDSGLGAIFQVLATLIVVWLVAIPLATGLPGTVASGIRDSRILGFVDKYTPQGLDTLPSKI AAMLSESGLPPLISPFTGGSSVEVDAPEINVTNVDLVEAMRPSVIHVMGDAQECSRRLMGSGFVASPDYVVTNAHVVAGT STVSLDTMIGTRSAEVVFYDPNLDIAVLYSPDLGLDPLPWASTPLDTGDEAIVMGFPQSGPFNASPARVRERIMITGSNI YANGQHEREAYSVRGSIQSGNSGGPMANEMGEVVGVVFGAAIDGSDTGYVLTAEEVQERIGDITSLTQPVDTMQCAVS
Sequences:
>Translated_398_residues MLSPSLVVDAVIVLVMAFALWGGWRQGAFTSLLSTVGVVSGLVVGAAAAPFVMGLTDSTALRFLLAIGTVVLLVGLGNLI GAHLGAAIRDNIKFRSSRTLDSGLGAIFQVLATLIVVWLVAIPLATGLPGTVASGIRDSRILGFVDKYTPQGLDTLPSKI AAMLSESGLPPLISPFTGGSSVEVDAPEINVTNVDLVEAMRPSVIHVMGDAQECSRRLMGSGFVASPDYVVTNAHVVAGT STVSLDTMIGTRSAEVVFYDPNLDIAVLYSPDLGLDPLPWASTPLDTGDEAIVMGFPQSGPFNASPARVRERIMITGSNI YANGQHEREAYSVRGSIQSGNSGGPMANEMGEVVGVVFGAAIDGSDTGYVLTAEEVQERIGDITSLTQPVDTMQCAVS >Mature_398_residues MLSPSLVVDAVIVLVMAFALWGGWRQGAFTSLLSTVGVVSGLVVGAAAAPFVMGLTDSTALRFLLAIGTVVLLVGLGNLI GAHLGAAIRDNIKFRSSRTLDSGLGAIFQVLATLIVVWLVAIPLATGLPGTVASGIRDSRILGFVDKYTPQGLDTLPSKI AAMLSESGLPPLISPFTGGSSVEVDAPEINVTNVDLVEAMRPSVIHVMGDAQECSRRLMGSGFVASPDYVVTNAHVVAGT STVSLDTMIGTRSAEVVFYDPNLDIAVLYSPDLGLDPLPWASTPLDTGDEAIVMGFPQSGPFNASPARVRERIMITGSNI YANGQHEREAYSVRGSIQSGNSGGPMANEMGEVVGVVFGAAIDGSDTGYVLTAEEVQERIGDITSLTQPVDTMQCAVS
Specific function: Unknown
COG id: COG0265
COG function: function code O; Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41351; Mature: 41351
Theoretical pI: Translated: 4.26; Mature: 4.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSPSLVVDAVIVLVMAFALWGGWRQGAFTSLLSTVGVVSGLVVGAAAAPFVMGLTDSTA CCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHH LRFLLAIGTVVLLVGLGNLIGAHLGAAIRDNIKFRSSRTLDSGLGAIFQVLATLIVVWLV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHHHHHHHHHHHHHHHHHHH AIPLATGLPGTVASGIRDSRILGFVDKYTPQGLDTLPSKIAAMLSESGLPPLISPFTGGS HHHHHCCCCHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC SVEVDAPEINVTNVDLVEAMRPSVIHVMGDAQECSRRLMGSGFVASPDYVVTNAHVVAGT EEEECCCCEECCCHHHHHHCCCCEEEEECCHHHHHHHHHCCCCCCCCCEEEECCEEEECC STVSLDTMIGTRSAEVVFYDPNLDIAVLYSPDLGLDPLPWASTPLDTGDEAIVMGFPQSG CEEEEHHHCCCCCCEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCC PFNASPARVRERIMITGSNIYANGQHEREAYSVRGSIQSGNSGGPMANEMGEVVGVVFGA CCCCCHHHHHCEEEEECCCEEECCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHC AIDGSDTGYVLTAEEVQERIGDITSLTQPVDTMQCAVS EECCCCCCEEEEHHHHHHHHHHHHHHHCCHHHHHHHCC >Mature Secondary Structure MLSPSLVVDAVIVLVMAFALWGGWRQGAFTSLLSTVGVVSGLVVGAAAAPFVMGLTDSTA CCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHH LRFLLAIGTVVLLVGLGNLIGAHLGAAIRDNIKFRSSRTLDSGLGAIFQVLATLIVVWLV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHHHHHHHHHHHHHHHHHHH AIPLATGLPGTVASGIRDSRILGFVDKYTPQGLDTLPSKIAAMLSESGLPPLISPFTGGS HHHHHCCCCHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC SVEVDAPEINVTNVDLVEAMRPSVIHVMGDAQECSRRLMGSGFVASPDYVVTNAHVVAGT EEEECCCCEECCCHHHHHHCCCCEEEEECCHHHHHHHHHCCCCCCCCCEEEECCEEEECC STVSLDTMIGTRSAEVVFYDPNLDIAVLYSPDLGLDPLPWASTPLDTGDEAIVMGFPQSG CEEEEHHHCCCCCCEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCC PFNASPARVRERIMITGSNIYANGQHEREAYSVRGSIQSGNSGGPMANEMGEVVGVVFGA CCCCCHHHHHCEEEEECCCEEECCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHC AIDGSDTGYVLTAEEVQERIGDITSLTQPVDTMQCAVS EECCCCCCEEEEHHHHHHHHHHHHHHHCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA