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The map label for this gene is nudL [H]

Identifier: 145294426

GI number: 145294426

Start: 414452

End: 415195

Strand: Direct

Name: nudL [H]

Synonym: cgR_0381

Alternate gene names: 145294426

Gene position: 414452-415195 (Clockwise)

Preceding gene: 145294425

Following gene: 145294427

Centisome position: 12.51

GC content: 59.95

Gene sequence:

>744_bases
ATGCGTAACTACCCTGATTTACCGCATGATTTCCCAGGTCAAAACACAGAGCTCACCCCCGCAAAAGCTCCGGTATGGAT
GCACCGACTTATTGATCGCATCCACGCAGGCCACATGGCCAACCCGCTGGACGGTGCGGAACCGCTCGGCGACACAGACT
CCGAAAAGCGCGCTGCCGTGCTCATGCTATTTTCTGGCTCGGAAACCTCCTTTGACCTGCCCAATGACGCCTCCGTGCTG
CTGACGCACCGCACCCCGACGATGCGTTCCCATGCAGGCCAGATTGCCTTTCCCGGTGGCCGAATCGACACCACCGATAC
TAACGCCGTGGACTGCGCCTTCCGCGAGGCCTGGGAAGAAACCGGGCTGGATCGCCGCACCGCAACCCCATTAGCCCAGC
TCAACGAGGTGCACATCCGTGCCACCGGATACCCCGTCTACCCAATCCTTGGACACTGGCACACCCCATCACCCGTCGCC
GTGGCCAGCCCACACGAAACCGACGAAGTTTTCGACGCCCCACTCTACGACCTCATCGACCCCAAAAACCGCCTCATGGT
CGGCTGGCGCGAATGGCACGGACCAGCGTTTCGAATCAACGACTACATCATCTGGGGATTCACCGGCGGACTACTCTCCG
CGATCCTCGACACCGCCGGCTGGGCCACCGAATGGGACACCGACCGCATCTTCGACCTGGAAAATACATTGTCAACATCT
CGCAACAATGAGCGTATGCGTTAG

Upstream 100 bases:

>100_bases
ACCATCGTGGTTTCTCCAGACGGCAATGTAGTGGACACCTTCCCGCAGCCTTTCGAAACCATCGATGACCTCGAAACCGC
TGTGGCAGGGGCGCTGCAGA

Downstream 100 bases:

>100_bases
GCTGACGGGCTCCGGTGGCCTAAAATCGAAGCGATCTAAAAATTTGGCAGTTAATATTATCGATTTTCGAAAGCGTAGAA
CACCAAACCATTGTTGAGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
MRNYPDLPHDFPGQNTELTPAKAPVWMHRLIDRIHAGHMANPLDGAEPLGDTDSEKRAAVLMLFSGSETSFDLPNDASVL
LTHRTPTMRSHAGQIAFPGGRIDTTDTNAVDCAFREAWEETGLDRRTATPLAQLNEVHIRATGYPVYPILGHWHTPSPVA
VASPHETDEVFDAPLYDLIDPKNRLMVGWREWHGPAFRINDYIIWGFTGGLLSAILDTAGWATEWDTDRIFDLENTLSTS
RNNERMR

Sequences:

>Translated_247_residues
MRNYPDLPHDFPGQNTELTPAKAPVWMHRLIDRIHAGHMANPLDGAEPLGDTDSEKRAAVLMLFSGSETSFDLPNDASVL
LTHRTPTMRSHAGQIAFPGGRIDTTDTNAVDCAFREAWEETGLDRRTATPLAQLNEVHIRATGYPVYPILGHWHTPSPVA
VASPHETDEVFDAPLYDLIDPKNRLMVGWREWHGPAFRINDYIIWGFTGGLLSAILDTAGWATEWDTDRIFDLENTLSTS
RNNERMR
>Mature_247_residues
MRNYPDLPHDFPGQNTELTPAKAPVWMHRLIDRIHAGHMANPLDGAEPLGDTDSEKRAAVLMLFSGSETSFDLPNDASVL
LTHRTPTMRSHAGQIAFPGGRIDTTDTNAVDCAFREAWEETGLDRRTATPLAQLNEVHIRATGYPVYPILGHWHTPSPVA
VASPHETDEVFDAPLYDLIDPKNRLMVGWREWHGPAFRINDYIIWGFTGGLLSAILDTAGWATEWDTDRIFDLENTLSTS
RNNERMR

Specific function: Probably mediates the hydrolysis of some nucleoside diphosphate derivatives [H]

COG id: COG0494

COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Drosophila melanogaster, GI18859683, Length=144, Percent_Identity=36.1111111111111, Blast_Score=83, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000086
- InterPro:   IPR015797
- InterPro:   IPR000059 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: NA

Molecular weight: Translated: 27709; Mature: 27709

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNYPDLPHDFPGQNTELTPAKAPVWMHRLIDRIHAGHMANPLDGAEPLGDTDSEKRAAV
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEE
LMLFSGSETSFDLPNDASVLLTHRTPTMRSHAGQIAFPGGRIDTTDTNAVDCAFREAWEE
EEEEECCCCCCCCCCCCEEEEEECCCCHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHH
TGLDRRTATPLAQLNEVHIRATGYPVYPILGHWHTPSPVAVASPHETDEVFDAPLYDLID
CCCCCHHCCCHHHCCEEEEEECCCEECHHCCCCCCCCCEEEECCCCCHHHHCCCHHHHCC
PKNRLMVGWREWHGPAFRINDYIIWGFTGGLLSAILDTAGWATEWDTDRIFDLENTLSTS
CCCCEEEEEHHHCCCEEEECCEEEEEEHHHHHHHHHHHCCCCCCCCCCEEEECHHHHHCC
RNNERMR
CCCCCCC
>Mature Secondary Structure
MRNYPDLPHDFPGQNTELTPAKAPVWMHRLIDRIHAGHMANPLDGAEPLGDTDSEKRAAV
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEE
LMLFSGSETSFDLPNDASVLLTHRTPTMRSHAGQIAFPGGRIDTTDTNAVDCAFREAWEE
EEEEECCCCCCCCCCCCEEEEEECCCCHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHH
TGLDRRTATPLAQLNEVHIRATGYPVYPILGHWHTPSPVAVASPHETDEVFDAPLYDLID
CCCCCHHCCCHHHCCEEEEEECCCEECHHCCCCCCCCCEEEECCCCCHHHHCCCHHHHCC
PKNRLMVGWREWHGPAFRINDYIIWGFTGGLLSAILDTAGWATEWDTDRIFDLENTLSTS
CCCCEEEEEHHHCCCEEEECCEEEEEEHHHHHHHHHHHCCCCCCCCCCEEEECHHHHHCC
RNNERMR
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA