Definition | Corynebacterium glutamicum R chromosome, complete genome. |
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Accession | NC_009342 |
Length | 3,314,179 |
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The map label for this gene is katA [H]
Identifier: 145294377
GI number: 145294377
Start: 372428
End: 373978
Strand: Direct
Name: katA [H]
Synonym: cgR_0332
Alternate gene names: 145294377
Gene position: 372428-373978 (Clockwise)
Preceding gene: 145294375
Following gene: 145294378
Centisome position: 11.24
GC content: 56.93
Gene sequence:
>1551_bases ATGTCTGAGAAGTCAGCAGCAGACCAGATCGTAGATCGCGGAATGCGTCCAAAGCTTTCTGGAAACACCACCCGCCACAA CGGAGCACCAGTTCCATCTGAGAACATCTCCGCAACCGCAGGCCCACAGGGCCCAAACGTTCTCAATGACATTCACCTCA TTGAAAAGCTCGCACACTTTAACCGCGAGAACGTTCCAGAGCGTATCCCTCACGCAAAGGGCCACGGCGCTTTCGGTGAG CTGCACATCACCGAGGACGTATCCGAATACACCAAGGCAGACCTGTTCCAGCCTGGTAAGGTCACCCCGCTGGCTGTTCG CTTCTCCACTGTTGCTGGTGAGCAGGGCTCCCCAGATACCTGGCGCGACGTCCACGGCTTCGCTCTTCGCTTCTACACCG AAGAGGGCAACTACGACATCGTGGGTAACAACACCCCAACCTTCTTCCTTCGTGACGGCATGAAGTTCCCGGACTTCATC CACTCACAGAAGCGTCTCAACAAGAACGGTCTGCGCGATGCAGACATGCAGTGGGATTTCTGGACCCGCGCACCTGAATC TGCACACCAGGTGACCTACCTGATGGGTGACCGCGGTACCCCTAAGACCTCCCGCCACCAGGACGGCTTCGGCTCCCACA CCTTCCAGTGGATCAACGCTGAAGGTAAGCCAGTTTGGGTTAAGTACCACTTCAAGACCCGCCAGGGCTGGGATTGCTTC ACCGATGCAGAAGCAGCAAAGGTTGCAGGCGAGAACGCTGACTACCAGCGCGAAGACCTCTACAACGCTATTGAAAACGG CGACTTCCCAATCTGGGACGTCAAGGTTCAGATCATGCCTTTCGAGGATGCAGAGAACTACCGCTGGAACCCATTCGATC TGACCAAGACCTGGTCTCAGAAGGATTACCCACTGATCCCAGTCGGTTACTTCATCCTGAACCGCAACCCACGCAACTTC TTCGCTCAGATCGAGCAGCTTGCACTGGATCCAGGCAACATCGTTCCTGGCGTCGGCCTGTCCCCAGACCGCATGCTCCA GGCACGTGTCTTCGCATACGCGGACCAGCAGCGTTACCGCATCGGCGCTAACTACCGCGACCTGCCAGTGAACCGTCCAA TCAACGAGGTCAACACCTACAGCCGCGAAGGTTCCATGCAGTACATCTTCGACGCTGAGGGCGAGCCTTCCTACAGCCCT AACCGCTACGACAAGGGCGCAGGCTACCTGGACAACGGTACGGATTCCTCCTCCAACCACACCTCCTACGGCCAGGCTGA TGACATCTACGTCAACCCAGACCCACACGGCACCGACTTGGTTCGTGCTGCTTACGTCAAGCACCAGGATGATGACGACT TCATCCAGCCAGGCATCCTATACCGCGAGGTCCTGGATGAGGGCGAGAAGGAGCGATTGGCAGACAACATCTCCAACGCA ATGCAGGGCATCTCTGAGGCAACCGAGCCACGCGTCTACGACTACTGGAACAACGTTGATGAGAACCTCGGCGCTCGCGT CAAGGAGCTTTACCTCCAGAAGAAGGCTTAA
Upstream 100 bases:
>100_bases ACGTAAGGGCTGATTATTTGGTGGCGCGAAGCGACATTCTGATGTAGACTATCAATCAGACTTAATCCATAGGTAACCCT CATAAAAGGAAGGAATGCTA
Downstream 100 bases:
>100_bases GTCCTTCTGATTTAAAATGAGGGCCTATCCACCAATGGTGGATAGGCCCTCATTCGACTTTGAAGCTATTGAGAGGAAAT TAGCTAGACAGCAGATCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 516; Mature: 515
Protein sequence:
>516_residues MSEKSAADQIVDRGMRPKLSGNTTRHNGAPVPSENISATAGPQGPNVLNDIHLIEKLAHFNRENVPERIPHAKGHGAFGE LHITEDVSEYTKADLFQPGKVTPLAVRFSTVAGEQGSPDTWRDVHGFALRFYTEEGNYDIVGNNTPTFFLRDGMKFPDFI HSQKRLNKNGLRDADMQWDFWTRAPESAHQVTYLMGDRGTPKTSRHQDGFGSHTFQWINAEGKPVWVKYHFKTRQGWDCF TDAEAAKVAGENADYQREDLYNAIENGDFPIWDVKVQIMPFEDAENYRWNPFDLTKTWSQKDYPLIPVGYFILNRNPRNF FAQIEQLALDPGNIVPGVGLSPDRMLQARVFAYADQQRYRIGANYRDLPVNRPINEVNTYSREGSMQYIFDAEGEPSYSP NRYDKGAGYLDNGTDSSSNHTSYGQADDIYVNPDPHGTDLVRAAYVKHQDDDDFIQPGILYREVLDEGEKERLADNISNA MQGISEATEPRVYDYWNNVDENLGARVKELYLQKKA
Sequences:
>Translated_516_residues MSEKSAADQIVDRGMRPKLSGNTTRHNGAPVPSENISATAGPQGPNVLNDIHLIEKLAHFNRENVPERIPHAKGHGAFGE LHITEDVSEYTKADLFQPGKVTPLAVRFSTVAGEQGSPDTWRDVHGFALRFYTEEGNYDIVGNNTPTFFLRDGMKFPDFI HSQKRLNKNGLRDADMQWDFWTRAPESAHQVTYLMGDRGTPKTSRHQDGFGSHTFQWINAEGKPVWVKYHFKTRQGWDCF TDAEAAKVAGENADYQREDLYNAIENGDFPIWDVKVQIMPFEDAENYRWNPFDLTKTWSQKDYPLIPVGYFILNRNPRNF FAQIEQLALDPGNIVPGVGLSPDRMLQARVFAYADQQRYRIGANYRDLPVNRPINEVNTYSREGSMQYIFDAEGEPSYSP NRYDKGAGYLDNGTDSSSNHTSYGQADDIYVNPDPHGTDLVRAAYVKHQDDDDFIQPGILYREVLDEGEKERLADNISNA MQGISEATEPRVYDYWNNVDENLGARVKELYLQKKA >Mature_515_residues SEKSAADQIVDRGMRPKLSGNTTRHNGAPVPSENISATAGPQGPNVLNDIHLIEKLAHFNRENVPERIPHAKGHGAFGEL HITEDVSEYTKADLFQPGKVTPLAVRFSTVAGEQGSPDTWRDVHGFALRFYTEEGNYDIVGNNTPTFFLRDGMKFPDFIH SQKRLNKNGLRDADMQWDFWTRAPESAHQVTYLMGDRGTPKTSRHQDGFGSHTFQWINAEGKPVWVKYHFKTRQGWDCFT DAEAAKVAGENADYQREDLYNAIENGDFPIWDVKVQIMPFEDAENYRWNPFDLTKTWSQKDYPLIPVGYFILNRNPRNFF AQIEQLALDPGNIVPGVGLSPDRMLQARVFAYADQQRYRIGANYRDLPVNRPINEVNTYSREGSMQYIFDAEGEPSYSPN RYDKGAGYLDNGTDSSSNHTSYGQADDIYVNPDPHGTDLVRAAYVKHQDDDDFIQPGILYREVLDEGEKERLADNISNAM QGISEATEPRVYDYWNNVDENLGARVKELYLQKKA
Specific function: Decomposes hydrogen peroxide into water and oxygen; serves to protect cells from the toxic effects of hydrogen peroxide [H]
COG id: COG0753
COG function: function code P; Catalase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the catalase family [H]
Homologues:
Organism=Homo sapiens, GI4557014, Length=488, Percent_Identity=44.0573770491803, Blast_Score=433, Evalue=1e-121, Organism=Escherichia coli, GI48994891, Length=384, Percent_Identity=42.96875, Blast_Score=317, Evalue=2e-87, Organism=Caenorhabditis elegans, GI71998444, Length=495, Percent_Identity=44.8484848484849, Blast_Score=443, Evalue=1e-124, Organism=Caenorhabditis elegans, GI25151141, Length=516, Percent_Identity=43.2170542635659, Blast_Score=426, Evalue=1e-119, Organism=Caenorhabditis elegans, GI25147792, Length=495, Percent_Identity=43.4343434343434, Blast_Score=423, Evalue=1e-118, Organism=Saccharomyces cerevisiae, GI6320462, Length=501, Percent_Identity=42.315369261477, Blast_Score=370, Evalue=1e-103, Organism=Saccharomyces cerevisiae, GI6321525, Length=511, Percent_Identity=37.7690802348337, Blast_Score=328, Evalue=1e-90, Organism=Drosophila melanogaster, GI17981717, Length=516, Percent_Identity=43.2170542635659, Blast_Score=442, Evalue=1e-124, Organism=Drosophila melanogaster, GI19920968, Length=512, Percent_Identity=38.0859375, Blast_Score=384, Evalue=1e-106,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002226 - InterPro: IPR020835 - InterPro: IPR010582 - InterPro: IPR018028 - InterPro: IPR011614 [H]
Pfam domain/function: PF00199 Catalase; PF06628 Catalase-rel [H]
EC number: =1.11.1.6 [H]
Molecular weight: Translated: 58695; Mature: 58564
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEKSAADQIVDRGMRPKLSGNTTRHNGAPVPSENISATAGPQGPNVLNDIHLIEKLAHF CCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC NRENVPERIPHAKGHGAFGELHITEDVSEYTKADLFQPGKVTPLAVRFSTVAGEQGSPDT CCCCCHHHCCCCCCCCCCEEEEECHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCH WRDVHGFALRFYTEEGNYDIVGNNTPTFFLRDGMKFPDFIHSQKRLNKNGLRDADMQWDF HHHHCCEEEEEEEECCCEEEECCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCHH WTRAPESAHQVTYLMGDRGTPKTSRHQDGFGSHTFQWINAEGKPVWVKYHFKTRQGWDCF HCCCCCCHHEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEEEECCCCCCCC TDAEAAKVAGENADYQREDLYNAIENGDFPIWDVKVQIMPFEDAENYRWNPFDLTKTWSQ CCCHHHHHCCCCCCCHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCC KDYPLIPVGYFILNRNPRNFFAQIEQLALDPGNIVPGVGLSPDRMLQARVFAYADQQRYR CCCCEEEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHEE IGANYRDLPVNRPINEVNTYSREGSMQYIFDAEGEPSYSPNRYDKGAGYLDNGTDSSSNH ECCCCCCCCCCCCHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC TSYGQADDIYVNPDPHGTDLVRAAYVKHQDDDDFIQPGILYREVLDEGEKERLADNISNA CCCCCCCCEEECCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHH MQGISEATEPRVYDYWNNVDENLGARVKELYLQKKA HHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure SEKSAADQIVDRGMRPKLSGNTTRHNGAPVPSENISATAGPQGPNVLNDIHLIEKLAHF CCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC NRENVPERIPHAKGHGAFGELHITEDVSEYTKADLFQPGKVTPLAVRFSTVAGEQGSPDT CCCCCHHHCCCCCCCCCCEEEEECHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCH WRDVHGFALRFYTEEGNYDIVGNNTPTFFLRDGMKFPDFIHSQKRLNKNGLRDADMQWDF HHHHCCEEEEEEEECCCEEEECCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCHH WTRAPESAHQVTYLMGDRGTPKTSRHQDGFGSHTFQWINAEGKPVWVKYHFKTRQGWDCF HCCCCCCHHEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEEEECCCCCCCC TDAEAAKVAGENADYQREDLYNAIENGDFPIWDVKVQIMPFEDAENYRWNPFDLTKTWSQ CCCHHHHHCCCCCCCHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCC KDYPLIPVGYFILNRNPRNFFAQIEQLALDPGNIVPGVGLSPDRMLQARVFAYADQQRYR CCCCEEEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHEE IGANYRDLPVNRPINEVNTYSREGSMQYIFDAEGEPSYSPNRYDKGAGYLDNGTDSSSNH ECCCCCCCCCCCCHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC TSYGQADDIYVNPDPHGTDLVRAAYVKHQDDDDFIQPGILYREVLDEGEKERLADNISNA CCCCCCCCEEECCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHH MQGISEATEPRVYDYWNNVDENLGARVKELYLQKKA HHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1426241; 12454454 [H]