Definition | Corynebacterium glutamicum R chromosome, complete genome. |
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Accession | NC_009342 |
Length | 3,314,179 |
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The map label for this gene is 145294357
Identifier: 145294357
GI number: 145294357
Start: 340573
End: 341853
Strand: Direct
Name: 145294357
Synonym: cgR_0312
Alternate gene names: NA
Gene position: 340573-341853 (Clockwise)
Preceding gene: 145294355
Following gene: 145294358
Centisome position: 10.28
GC content: 53.86
Gene sequence:
>1281_bases ATGAGTTCAGTTTCGCTGCAGGATTTTGATGCAGAGCGAATTGGTTTGTTCCACGAGGACATCAAGCGCAAGTTTGATGA GCTTAAGTCAAAAAATCTGAAGCTGGATCTTACTCGCGGTAAGCCTTCGTCGGAGCAGTTGGATTTCGCTGATGAGTTGT TGGCGTTGCCTGGTAAGGGTGATTTCAAGGCTGCGGATGGTACTGATGTCCGTAACTATGGCGGGCTGGATGGCATTGTT GATATTCGTCAGATTTGGGCGGATTTGCTGGGTGTTCCTGTGGAGCAGGTGCTGGCGGGGGATGCTTCGAGCTTGAACAT CATGTTTGATGTGATCAGCTGGTCGTACATTTTCGGTAACAATGATTCGGTTCAGCCTTGGTCGAAGGAAGAGACCGTTA AGTGGATTTGTCCTGTTCCGGGATATGATCGCCATTTCTCCATCACGGAGCGTTTCGGCTTTGAGATGATTTCTGTGCCA ATGAATGAAGACGGCCCTGATATGGATGCTGTTGAGGAATTGGTGAAGGATCCGCAGGTTAAGGGCATGTGGGTTGTGCC GGTATTTTCTAACCCGACTGGTTTCACGGTGTCGGAGGATGTCGCAAAGCGTCTGAGCACGATGGAAACCGCGGCGCCGG ACTTCCGCGTGGTGTGGGATAACGCTTACGCCGTTCATACTCTGACTGATGAGTTCCCTGAGGTCATCGACATCGTTGGG CTTGGTGAGGCGGCGGGTAACCCGAACCGTTTCTGGGCTTTCACTTCTACTTCGAAGATCACTCTCGCGGGTGCGGGCGT GTCCTTCTTCATGACTTCTGCGGAGAACCGTAAGTGGTACTCCGGTCATGCGGGTATCCGTGGCATTGGCCCTAACAAGG TCAATCAGTTGGCTCATGCGCGTTACTTTGGCGATGCTGAGGGAGTGCGCGCGGTGATGCGTAAGCATGCTGCGTCGTTG GCTCCGAAGTTCAACAAGGTTCTGGAGATCTTGGATTCCAGGCTTGCTGAGTACGGTGTCGCGCAGTGGACTGTCCCTGC GGGCGGTTACTTCATTTCCCTTGATGTGGTTCCTGGTACGGCGTCTCGCGTGGCTGAGTTGGCTAAGGAAGCCGGCATCG CGTTGACGGGCGCTGGATCTTCTTACCCGCTGCGTCAGGATCCGGAGAACAAGAACCTCCGTTTGGCGCCTTCTCTGCCT CCTGTTGAGGAACTTGAGGTTGCCATGGATGGCGTGGCTACGTGTGTTTTGCTGGCAGCTGCGGAGCACTACGCTAGCTA G
Upstream 100 bases:
>100_bases TCCCCTAAAACGTCTAGAGTAGTGGCTTGAGGTCACTGCTCTTTTTTTGTGCCCTTTTTTGTTCCGTCTATTTTGCCACC ACATGCGGAGGTACGCAGTT
Downstream 100 bases:
>100_bases AGTGAATACCGCGGAAACTGCACATTGGATTAACCGTTTGCTGCCGGGTCAGCCGGAGTTTCACCAGGTTGGCGCGTTTA AAGTGGCGGGTTACACGCTT
Product: hypothetical protein
Products: oxaloacetate; L-glutamate
Alternate protein names: NA
Number of amino acids: Translated: 426; Mature: 425
Protein sequence:
>426_residues MSSVSLQDFDAERIGLFHEDIKRKFDELKSKNLKLDLTRGKPSSEQLDFADELLALPGKGDFKAADGTDVRNYGGLDGIV DIRQIWADLLGVPVEQVLAGDASSLNIMFDVISWSYIFGNNDSVQPWSKEETVKWICPVPGYDRHFSITERFGFEMISVP MNEDGPDMDAVEELVKDPQVKGMWVVPVFSNPTGFTVSEDVAKRLSTMETAAPDFRVVWDNAYAVHTLTDEFPEVIDIVG LGEAAGNPNRFWAFTSTSKITLAGAGVSFFMTSAENRKWYSGHAGIRGIGPNKVNQLAHARYFGDAEGVRAVMRKHAASL APKFNKVLEILDSRLAEYGVAQWTVPAGGYFISLDVVPGTASRVAELAKEAGIALTGAGSSYPLRQDPENKNLRLAPSLP PVEELEVAMDGVATCVLLAAAEHYAS
Sequences:
>Translated_426_residues MSSVSLQDFDAERIGLFHEDIKRKFDELKSKNLKLDLTRGKPSSEQLDFADELLALPGKGDFKAADGTDVRNYGGLDGIV DIRQIWADLLGVPVEQVLAGDASSLNIMFDVISWSYIFGNNDSVQPWSKEETVKWICPVPGYDRHFSITERFGFEMISVP MNEDGPDMDAVEELVKDPQVKGMWVVPVFSNPTGFTVSEDVAKRLSTMETAAPDFRVVWDNAYAVHTLTDEFPEVIDIVG LGEAAGNPNRFWAFTSTSKITLAGAGVSFFMTSAENRKWYSGHAGIRGIGPNKVNQLAHARYFGDAEGVRAVMRKHAASL APKFNKVLEILDSRLAEYGVAQWTVPAGGYFISLDVVPGTASRVAELAKEAGIALTGAGSSYPLRQDPENKNLRLAPSLP PVEELEVAMDGVATCVLLAAAEHYAS >Mature_425_residues SSVSLQDFDAERIGLFHEDIKRKFDELKSKNLKLDLTRGKPSSEQLDFADELLALPGKGDFKAADGTDVRNYGGLDGIVD IRQIWADLLGVPVEQVLAGDASSLNIMFDVISWSYIFGNNDSVQPWSKEETVKWICPVPGYDRHFSITERFGFEMISVPM NEDGPDMDAVEELVKDPQVKGMWVVPVFSNPTGFTVSEDVAKRLSTMETAAPDFRVVWDNAYAVHTLTDEFPEVIDIVGL GEAAGNPNRFWAFTSTSKITLAGAGVSFFMTSAENRKWYSGHAGIRGIGPNKVNQLAHARYFGDAEGVRAVMRKHAASLA PKFNKVLEILDSRLAEYGVAQWTVPAGGYFISLDVVPGTASRVAELAKEAGIALTGAGSSYPLRQDPENKNLRLAPSLPP VEELEVAMDGVATCVLLAAAEHYAS
Specific function: Unknown
COG id: COG1167
COG function: function code KE; Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004839 - InterPro: IPR015424 - InterPro: IPR015421 [H]
Pfam domain/function: PF00155 Aminotran_1_2 [H]
EC number: 2.6.1.1
Molecular weight: Translated: 46513; Mature: 46382
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSVSLQDFDAERIGLFHEDIKRKFDELKSKNLKLDLTRGKPSSEQLDFADELLALPGKG CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHCHHHHHHCCCCCC DFKAADGTDVRNYGGLDGIVDIRQIWADLLGVPVEQVLAGDASSLNIMFDVISWSYIFGN CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHCCCCCCCEEEEEEEEEEEEECC NDSVQPWSKEETVKWICPVPGYDRHFSITERFGFEMISVPMNEDGPDMDAVEELVKDPQV CCCCCCCCCCCCEEEEECCCCCCCCEEHHHHCCCEEEEECCCCCCCCHHHHHHHHCCCCC KGMWVVPVFSNPTGFTVSEDVAKRLSTMETAAPDFRVVWDNAYAVHTLTDEFPEVIDIVG CCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCEEEEEHHHHHHHHHHHHC LGEAAGNPNRFWAFTSTSKITLAGAGVSFFMTSAENRKWYSGHAGIRGIGPNKVNQLAHA CCCCCCCCCEEEEEECCCEEEEEECCCEEEEECCCCCEEEECCCCCCCCCHHHHHHHHHH RYFGDAEGVRAVMRKHAASLAPKFNKVLEILDSRLAEYGVAQWTVPAGGYFISLDVVPGT HHCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEEEECCCC ASRVAELAKEAGIALTGAGSSYPLRQDPENKNLRLAPSLPPVEELEVAMDGVATCVLLAA HHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHH AEHYAS HHHHCC >Mature Secondary Structure SSVSLQDFDAERIGLFHEDIKRKFDELKSKNLKLDLTRGKPSSEQLDFADELLALPGKG CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHCHHHHHHCCCCCC DFKAADGTDVRNYGGLDGIVDIRQIWADLLGVPVEQVLAGDASSLNIMFDVISWSYIFGN CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHCCCCCCCEEEEEEEEEEEEECC NDSVQPWSKEETVKWICPVPGYDRHFSITERFGFEMISVPMNEDGPDMDAVEELVKDPQV CCCCCCCCCCCCEEEEECCCCCCCCEEHHHHCCCEEEEECCCCCCCCHHHHHHHHCCCCC KGMWVVPVFSNPTGFTVSEDVAKRLSTMETAAPDFRVVWDNAYAVHTLTDEFPEVIDIVG CCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCEEEEEHHHHHHHHHHHHC LGEAAGNPNRFWAFTSTSKITLAGAGVSFFMTSAENRKWYSGHAGIRGIGPNKVNQLAHA CCCCCCCCCEEEEEECCCEEEEEECCCEEEEECCCCCEEEECCCCCCCCCHHHHHHHHHH RYFGDAEGVRAVMRKHAASLAPKFNKVLEILDSRLAEYGVAQWTVPAGGYFISLDVVPGT HHCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEEEECCCC ASRVAELAKEAGIALTGAGSSYPLRQDPENKNLRLAPSLPPVEELEVAMDGVATCVLLAA HHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHH AEHYAS HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: L-aspartate; 2-oxoglutarate
Specific reaction: L-aspartate + 2-oxoglutarate = oxaloacetate + L-glutamate
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA