Click here to switch to the map view.

The map label for this gene is 145294348

Identifier: 145294348

GI number: 145294348

Start: 329494

End: 329697

Strand: Direct

Name: 145294348

Synonym: cgR_0303

Alternate gene names: NA

Gene position: 329494-329697 (Clockwise)

Preceding gene: 145294347

Following gene: 145294349

Centisome position: 9.94

GC content: 50.98

Gene sequence:

>204_bases
ATGAGCGATTTTTCCAACAAGGCAGAGGACCTCACAGGTAAGGCTAAAGAAGGATTCGGCGAGGCAACTGATAACGAGTC
CCTAGCTGATGAGGGCCGTGCGGATCAGGCTAAGGCAGACATCAAGGATGCTGCTGAAAATGCCGGTGAAAAGGTAAAGG
ACGCAGCTAACAAGGTTCTGGGTGCGTTCAAGAAGGACGACTAA

Upstream 100 bases:

>100_bases
GGATTTATATCAATTTCAGGGCGGGGCGAGCTTTTAGTGATTCACGCTCCTACGGTGGGTATCACAAATACCTCAACTAT
AAGTAGGAGATGAGCACCAC

Downstream 100 bases:

>100_bases
TCGGGTTGAAAGCATTTTTAACTCCTAATTGACGCACATCTAGCTGGCCGAATGATGGATTTGTTTGGCGCGCAACCATT
CCGATAGACTGATCGGCGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 67; Mature: 66

Protein sequence:

>67_residues
MSDFSNKAEDLTGKAKEGFGEATDNESLADEGRADQAKADIKDAAENAGEKVKDAANKVLGAFKKDD

Sequences:

>Translated_67_residues
MSDFSNKAEDLTGKAKEGFGEATDNESLADEGRADQAKADIKDAAENAGEKVKDAANKVLGAFKKDD
>Mature_66_residues
SDFSNKAEDLTGKAKEGFGEATDNESLADEGRADQAKADIKDAAENAGEKVKDAANKVLGAFKKDD

Specific function: Unknown

COG id: COG3237

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0337 (CsbD) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008462 [H]

Pfam domain/function: PF05532 CsbD [H]

EC number: NA

Molecular weight: Translated: 7049; Mature: 6917

Theoretical pI: Translated: 4.27; Mature: 4.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDFSNKAEDLTGKAKEGFGEATDNESLADEGRADQAKADIKDAAENAGEKVKDAANKVL
CCCCCHHHHHHCCHHHHCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
GAFKKDD
HHHCCCC
>Mature Secondary Structure 
SDFSNKAEDLTGKAKEGFGEATDNESLADEGRADQAKADIKDAAENAGEKVKDAANKVL
CCCCHHHHHHCCHHHHCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
GAFKKDD
HHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12840036 [H]