Click here to switch to the map view.

The map label for this gene is tadA [H]

Identifier: 145294347

GI number: 145294347

Start: 328913

End: 329392

Strand: Direct

Name: tadA [H]

Synonym: cgR_0302

Alternate gene names: 145294347

Gene position: 328913-329392 (Clockwise)

Preceding gene: 145294346

Following gene: 145294348

Centisome position: 9.92

GC content: 60.0

Gene sequence:

>480_bases
GTGGGCGTTTTACCTGTGCAGGCGCGCATCAAAGACGATGAGCGCCGCATGCGCCATGCTTTGGATATTGCTCGCCAAAC
CCCTGAGGGGGACGTTCCCGTTGGCGCCGTCATTTACGCGCCGACCGGGGAGATCCTGGCGACCGCAACGAACCGTCGAG
AAGCAGACCGCGATCCCACGGCCCACGCCGAAATTATTGCTTTACGACGAGCCGCCCGCCGTTTTTCCGACGGCTGGCGG
CTGAGTGACTGCACCGCGGTGGTCACCTTGGAGCCCTGCAGTATGTGCGCCGGCGCCTTGGTGGGTGCTCGAATCGGACG
CATCGTATTCGGAGCATTTGAGCCCCGAACCGGCGCCTGTGGATCTGTATTTGACGTGGTTCGAGACCCCGCAGTGTTGC
ACAAAGTGGAAGTCAGTGGAGGAATCCTCGAGCCTGAATGTGCTGCCTTGATGACCGAATTTTTCGAACTTCACAGGTAA

Upstream 100 bases:

>100_bases
TTTGCGATGACATGGATTTGGATCCTTCCGAACAATTGCTGCGCATCGCGGAAGAACTCGGTTTTGATAATGATCTGGCT
CGGGTGGTGGGATTCGACTA

Downstream 100 bases:

>100_bases
CGGATTTATATCAATTTCAGGGCGGGGCGAGCTTTTAGTGATTCACGCTCCTACGGTGGGTATCACAAATACCTCAACTA
TAAGTAGGAGATGAGCACCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 158

Protein sequence:

>159_residues
MGVLPVQARIKDDERRMRHALDIARQTPEGDVPVGAVIYAPTGEILATATNRREADRDPTAHAEIIALRRAARRFSDGWR
LSDCTAVVTLEPCSMCAGALVGARIGRIVFGAFEPRTGACGSVFDVVRDPAVLHKVEVSGGILEPECAALMTEFFELHR

Sequences:

>Translated_159_residues
MGVLPVQARIKDDERRMRHALDIARQTPEGDVPVGAVIYAPTGEILATATNRREADRDPTAHAEIIALRRAARRFSDGWR
LSDCTAVVTLEPCSMCAGALVGARIGRIVFGAFEPRTGACGSVFDVVRDPAVLHKVEVSGGILEPECAALMTEFFELHR
>Mature_158_residues
GVLPVQARIKDDERRMRHALDIARQTPEGDVPVGAVIYAPTGEILATATNRREADRDPTAHAEIIALRRAARRFSDGWRL
SDCTAVVTLEPCSMCAGALVGARIGRIVFGAFEPRTGACGSVFDVVRDPAVLHKVEVSGGILEPECAALMTEFFELHR

Specific function: Deaminates adenosine-34 to inosine in tRNA-Arg2 [H]

COG id: COG0590

COG function: function code FJ; Cytosine/adenosine deaminases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytidine and deoxycytidylate deaminase family [H]

Homologues:

Organism=Escherichia coli, GI145693172, Length=147, Percent_Identity=49.6598639455782, Blast_Score=137, Evalue=4e-34,
Organism=Caenorhabditis elegans, GI17541138, Length=148, Percent_Identity=30.4054054054054, Blast_Score=66, Evalue=9e-12,
Organism=Saccharomyces cerevisiae, GI6322425, Length=155, Percent_Identity=32.258064516129, Blast_Score=70, Evalue=2e-13,
Organism=Drosophila melanogaster, GI21355527, Length=146, Percent_Identity=33.5616438356164, Blast_Score=66, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016192
- InterPro:   IPR002125
- InterPro:   IPR016193 [H]

Pfam domain/function: PF00383 dCMP_cyt_deam_1 [H]

EC number: NA

Molecular weight: Translated: 17253; Mature: 17122

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS00903 CYT_DCMP_DEAMINASES

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVLPVQARIKDDERRMRHALDIARQTPEGDVPVGAVIYAPTGEILATATNRREADRDPT
CCCCCCHHHCCCHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCEEEECCCCCCCCCCCC
AHAEIIALRRAARRFSDGWRLSDCTAVVTLEPCSMCAGALVGARIGRIVFGAFEPRTGAC
HHHHHHHHHHHHHHHCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHEECCCCCCCCC
GSVFDVVRDPAVLHKVEVSGGILEPECAALMTEFFELHR
HHHHHHHCCCHHHEEEECCCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GVLPVQARIKDDERRMRHALDIARQTPEGDVPVGAVIYAPTGEILATATNRREADRDPT
CCCCCHHHCCCHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCEEEECCCCCCCCCCCC
AHAEIIALRRAARRFSDGWRLSDCTAVVTLEPCSMCAGALVGARIGRIVFGAFEPRTGAC
HHHHHHHHHHHHHHHCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHEECCCCCCCCC
GSVFDVVRDPAVLHKVEVSGGILEPECAALMTEFFELHR
HHHHHHHCCCHHHEEEECCCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]