Definition | Corynebacterium glutamicum R chromosome, complete genome. |
---|---|
Accession | NC_009342 |
Length | 3,314,179 |
Click here to switch to the map view.
The map label for this gene is 145294316
Identifier: 145294316
GI number: 145294316
Start: 301141
End: 301650
Strand: Direct
Name: 145294316
Synonym: cgR_0271
Alternate gene names: NA
Gene position: 301141-301650 (Clockwise)
Preceding gene: 145294309
Following gene: 145294317
Centisome position: 9.09
GC content: 54.51
Gene sequence:
>510_bases GTGAGTAGTCTTGGCAACATGGATACCAGGATGAGATTGCAGGTAGCAGCAGGTTCCGCGCTGATTGGTGCTGGGGTTGC GGTTAATGATTACGTACAAAGCCCAGTCCGCCGGGCCATCAGCTATGGTGCGTTGGCGCTTTCTGGGGCGACGGTGATTG CGATGGGTCAGGACCCGACTGGGGAGCGGTCCATCATTGCGAAAGATTCCGCGACGATGGTTGATCAAATCCGCCAGGAG ATCGGCGATTTGGGTGTCACGCCTGGTCCGGAATCTGATGTGGATGCCATCACGGAGCGAGGTCCGCTGGTGACGTGGCT GTTGCTTGCTGTTTTTGTCGTGGCATTTTTCACCTTGGCGTATTTCTCTATACGCATGGATGTGGCGGTGATGAGAAGGA TCGCTAAGTTCTTTGAAAAACGTGGCGCTTCCAGGCCATTCACCTGTACTGGCATGGTGTACGCCGCTTTTATTTACGCA ATCTGTGAGCTGGAGGCCCGCACAAAATGA
Upstream 100 bases:
>100_bases ATGAAATCGTTAAGCGGAAGGTTGGTGCGTTCCGCCGCGATGTGGACCTCGGGAGCCTTGGCTTTTTTGAATCTTTCAAA CATGCCCACCACCTTAATCA
Downstream 100 bases:
>100_bases CCTATCCCGTGTTGAGTGTTTTGGATAATTCTGGCGATCACAACATCATCTGGCATGTGCAAACTTATCCCGCGGCGCTG CCCACCGGGGCGTGGATTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 169; Mature: 168
Protein sequence:
>169_residues MSSLGNMDTRMRLQVAAGSALIGAGVAVNDYVQSPVRRAISYGALALSGATVIAMGQDPTGERSIIAKDSATMVDQIRQE IGDLGVTPGPESDVDAITERGPLVTWLLLAVFVVAFFTLAYFSIRMDVAVMRRIAKFFEKRGASRPFTCTGMVYAAFIYA ICELEARTK
Sequences:
>Translated_169_residues MSSLGNMDTRMRLQVAAGSALIGAGVAVNDYVQSPVRRAISYGALALSGATVIAMGQDPTGERSIIAKDSATMVDQIRQE IGDLGVTPGPESDVDAITERGPLVTWLLLAVFVVAFFTLAYFSIRMDVAVMRRIAKFFEKRGASRPFTCTGMVYAAFIYA ICELEARTK >Mature_168_residues SSLGNMDTRMRLQVAAGSALIGAGVAVNDYVQSPVRRAISYGALALSGATVIAMGQDPTGERSIIAKDSATMVDQIRQEI GDLGVTPGPESDVDAITERGPLVTWLLLAVFVVAFFTLAYFSIRMDVAVMRRIAKFFEKRGASRPFTCTGMVYAAFIYAI CELEARTK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18193; Mature: 18062
Theoretical pI: Translated: 8.19; Mature: 8.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSLGNMDTRMRLQVAAGSALIGAGVAVNDYVQSPVRRAISYGALALSGATVIAMGQDPT CCCCCCCCHHEEEEEECCCHHHHCCCHHHHHHHHHHHHHHHHHHHEECCCEEEEECCCCC GERSIIAKDSATMVDQIRQEIGDLGVTPGPESDVDAITERGPLVTWLLLAVFVVAFFTLA CCCCEEECCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHH YFSIRMDVAVMRRIAKFFEKRGASRPFTCTGMVYAAFIYAICELEARTK HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SSLGNMDTRMRLQVAAGSALIGAGVAVNDYVQSPVRRAISYGALALSGATVIAMGQDPT CCCCCCCHHEEEEEECCCHHHHCCCHHHHHHHHHHHHHHHHHHHEECCCEEEEECCCCC GERSIIAKDSATMVDQIRQEIGDLGVTPGPESDVDAITERGPLVTWLLLAVFVVAFFTLA CCCCEEECCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHH YFSIRMDVAVMRRIAKFFEKRGASRPFTCTGMVYAAFIYAICELEARTK HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA