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The map label for this gene is fucR [H]

Identifier: 145294231

GI number: 145294231

Start: 205156

End: 206004

Strand: Direct

Name: fucR [H]

Synonym: cgR_0187

Alternate gene names: 145294231

Gene position: 205156-206004 (Clockwise)

Preceding gene: 145294227

Following gene: 145294232

Centisome position: 6.19

GC content: 52.77

Gene sequence:

>849_bases
ATGTCCCAAGTGATTCCCGCCAGCTCACAAGAAAAGCGTCGTGAGCGCATCGTTTCTTATGTCACCCGTCATGGATTCGC
TCGTGTTGAAGCATTAGCTGAGCTTTTTGAGGTCAGCGCAATGACTATTCACCGTGATTTGGAGGCGCTGGCTGCGGACA
CTTTGGTGGAGCGCATTAGAGGTGGAGCGCGTTCAGTGTCGCCGTCGATGAGTGAGTTGGCGGTGGAGCAGCGTCGGCAT
TTGCATCGCACTGTTAAAGAGGCGTTGTGTACTGCAGCAGCACGGTTGATTCCGGAGGGCGCTGTAGTGGCGATTGATGA
TTCCACCACGTTGGAGTCTTTGGTGGAGAAGTTGCCGCAGCGGTCACCATCGGCGTTGATTACGCATTCTTTGAAGACAA
TGGCGGATCATCGTGTGCGCGCCGGGATGAGCGATATCCGTTTGATTGCGTGTGCGGGATTGTATTTCGCGGAGACTGAT
TCTTTCTTGGGCAAGGCAACTTCAGCGCAGTTGAATGAGCTGTCGGCGGATATTTCTTTTGTTTCTACGACTGCGGTGCG
CGCTACGGGGGAGGCCCCGGCGCTGTTTCATCCTGATATGGAGGCTGCTGATACGAAGCGGGCATTGATTGGGATTGGTA
GCGTGCGTGTGTTGGTGGTGGATTCTAGTAAATTTGGTTCGGCTGGTGTGTTCAAGGTTGCTTCGATTGAGGAGTTTGAC
CACATCATCATTGATCAGCAGTGCACCCGTGAGCAGCGGGATCTTTTGCGTAATTCGCGCGCGCAGATCCATGTGATTGA
CCACAATGGTGATGAAATTTTGGATACCCCAACGGAAGAGGATTTTTAA

Upstream 100 bases:

>100_bases
AACAACAATCTAACGCCATCATGTTATAAAAAAGCAAGACCTAACATAAAAATGTTAGAAAGTGCTGGATCTAACAACAT
TTCCGTGGTAACTTTTTCAC

Downstream 100 bases:

>100_bases
GATGGCTTTGGTTCTTGGAATCGATAGTTCCACCCAATCCTGCAAGGCTTTGCTTGTCGACGCCGCCACCGGCCAGGTTA
TCGACGAAGGCCGCGCGAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 282; Mature: 281

Protein sequence:

>282_residues
MSQVIPASSQEKRRERIVSYVTRHGFARVEALAELFEVSAMTIHRDLEALAADTLVERIRGGARSVSPSMSELAVEQRRH
LHRTVKEALCTAAARLIPEGAVVAIDDSTTLESLVEKLPQRSPSALITHSLKTMADHRVRAGMSDIRLIACAGLYFAETD
SFLGKATSAQLNELSADISFVSTTAVRATGEAPALFHPDMEAADTKRALIGIGSVRVLVVDSSKFGSAGVFKVASIEEFD
HIIIDQQCTREQRDLLRNSRAQIHVIDHNGDEILDTPTEEDF

Sequences:

>Translated_282_residues
MSQVIPASSQEKRRERIVSYVTRHGFARVEALAELFEVSAMTIHRDLEALAADTLVERIRGGARSVSPSMSELAVEQRRH
LHRTVKEALCTAAARLIPEGAVVAIDDSTTLESLVEKLPQRSPSALITHSLKTMADHRVRAGMSDIRLIACAGLYFAETD
SFLGKATSAQLNELSADISFVSTTAVRATGEAPALFHPDMEAADTKRALIGIGSVRVLVVDSSKFGSAGVFKVASIEEFD
HIIIDQQCTREQRDLLRNSRAQIHVIDHNGDEILDTPTEEDF
>Mature_281_residues
SQVIPASSQEKRRERIVSYVTRHGFARVEALAELFEVSAMTIHRDLEALAADTLVERIRGGARSVSPSMSELAVEQRRHL
HRTVKEALCTAAARLIPEGAVVAIDDSTTLESLVEKLPQRSPSALITHSLKTMADHRVRAGMSDIRLIACAGLYFAETDS
FLGKATSAQLNELSADISFVSTTAVRATGEAPALFHPDMEAADTKRALIGIGSVRVLVVDSSKFGSAGVFKVASIEEFDH
IIIDQQCTREQRDLLRNSRAQIHVIDHNGDEILDTPTEEDF

Specific function: Transcriptional activator of the fuc operon [H]

COG id: COG1349

COG function: function code KG; Transcriptional regulators of sugar metabolism

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH deoR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789829, Length=236, Percent_Identity=29.6610169491525, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI226510968, Length=234, Percent_Identity=27.7777777777778, Blast_Score=82, Evalue=3e-17,
Organism=Escherichia coli, GI87082344, Length=253, Percent_Identity=23.3201581027668, Blast_Score=74, Evalue=9e-15,
Organism=Escherichia coli, GI1789170, Length=238, Percent_Identity=26.890756302521, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1789519, Length=258, Percent_Identity=26.7441860465116, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI1787540, Length=257, Percent_Identity=24.124513618677, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI1789059, Length=238, Percent_Identity=24.3697478991597, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: 900 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014036
- InterPro:   IPR001034
- InterPro:   IPR018356
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00455 DeoR; PF08220 HTH_DeoR [H]

EC number: NA

Molecular weight: Translated: 30845; Mature: 30714

Theoretical pI: Translated: 5.80; Mature: 5.80

Prosite motif: PS00894 HTH_DEOR_1 ; PS51000 HTH_DEOR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQVIPASSQEKRRERIVSYVTRHGFARVEALAELFEVSAMTIHRDLEALAADTLVERIR
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GGARSVSPSMSELAVEQRRHLHRTVKEALCTAAARLIPEGAVVAIDDSTTLESLVEKLPQ
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHCC
RSPSALITHSLKTMADHRVRAGMSDIRLIACAGLYFAETDSFLGKATSAQLNELSADISF
CCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VSTTAVRATGEAPALFHPDMEAADTKRALIGIGSVRVLVVDSSKFGSAGVFKVASIEEFD
HHHHHHEECCCCCCEECCCCCHHHHHHHHEEECCEEEEEEECCCCCCCCEEEEHHHHHHH
HIIIDQQCTREQRDLLRNSRAQIHVIDHNGDEILDTPTEEDF
HHHHCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCC
>Mature Secondary Structure 
SQVIPASSQEKRRERIVSYVTRHGFARVEALAELFEVSAMTIHRDLEALAADTLVERIR
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GGARSVSPSMSELAVEQRRHLHRTVKEALCTAAARLIPEGAVVAIDDSTTLESLVEKLPQ
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHCC
RSPSALITHSLKTMADHRVRAGMSDIRLIACAGLYFAETDSFLGKATSAQLNELSADISF
CCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VSTTAVRATGEAPALFHPDMEAADTKRALIGIGSVRVLVVDSSKFGSAGVFKVASIEEFD
HHHHHHEECCCCCCEECCCCCHHHHHHHHEEECCEEEEEEECCCCCCCCEEEEHHHHHHH
HIIIDQQCTREQRDLLRNSRAQIHVIDHNGDEILDTPTEEDF
HHHHCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]