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The map label for this gene is flhO [H]

Identifier: 138896905

GI number: 138896905

Start: 3383333

End: 3384370

Strand: Reverse

Name: flhO [H]

Synonym: GTNG_3274

Alternate gene names: 138896905

Gene position: 3384370-3383333 (Counterclockwise)

Preceding gene: 138896906

Following gene: 138896904

Centisome position: 95.33

GC content: 55.68

Gene sequence:

>1038_bases
ATGCGGTGGCCGCTTCTGCCCGCCTATAATGTAGGAAGAGACAGAAACCGCCGCTGCCTCGAGCCAGCAGCGGTTTTTGG
AAAAAATCGTGCCTTTAAGCACGGAGAGGAATGGAAATGCGATCGCCTGAATGAAGGTGGATCGTTCATCATGACAGGTC
ATGATTCTATGGCAATGGCCAACGATGGGACAAGCGAGGTGATCGTCATGTTGAGGGGACTGTATACAGCTGCGAGCGGC
ATGCTGGCGCAACAACGGCGGGTCGATTGGCTCACAAACAATCTGGCAAACGCCGAAACGCCAGGGTATAAAGCCGACGC
AGGAGCGATGAGAGCATTTCCGGAACTGTTGATGAACCGGCTCGAGGACGAGTCGATTCCATCCGCCCCACCGCGCGCCG
TCCCCACGCAAACCGCGATCGGGCTGCTCAACACAGGCGTATATACACAAGAGCTCATCCCGAACTTTCGACAAGGGGAT
ATCAAAGAAACAGGGCTCTCCACCGATGTCGCCTTAGTGGATGGACAAGTCCCGGTCGACCCGACAACTGGGGAGCGCGG
TACGCTCTTTTTTGCTGTCGAAAACGACCAAGGGGAGACTCGCTACACGAGAAACGGTCATTTCACACTGAGCCCGGACG
ACTACTTAACGACGCAAGACGGCTGGTATGTGTTGGATGGCAACGGCGAACGCATCGCTATCCCGAGCGAATCGTTCACC
GTTCGCGATGACGGGACGATTACGGCGGAAAACAGAACGATCGCCCGCTTAGGCGTCGTATTCGCCGCCAATCCGAAAAC
GGTAGTGAAGGAAGGGAACGGCTTATTCCGCAGCACTGACGGTCCATTGCCGCAGGCGCCAGGCAATGTGACGTATATGG
TCAAACAGGGCTTCATCGAGCGATCCAACGTCGACATCGAACGGACGATGACCGACTTGCTCGCCGCCTATCGCGCCTTT
GAAGCGAACCAAAAAATCATCCAAGCGTACGACCGCAGTTTAGACAAGGCCGTCAATGAAGTCGGCCGCTTGAAATGA

Upstream 100 bases:

>100_bases
ATGCTTGAGAACATCGACCGCGCGCCGAAAACACAGTTCGTTTGACCGTTTGCCGCCAGCGGCGACCGAAAAGTCTATGT
GAAAAAAGGAAAGGCGGGGG

Downstream 100 bases:

>100_bases
TAAAAGGGGGACAAGCTCATGCTCCGCTCGATGCACACCGCCGCCAACACGATGAACGCGTTGCAACAGCGGCTCGATAC
ACTAAGCCATAACATCGTCA

Product: flagellar basal-body rod protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 345; Mature: 345

Protein sequence:

>345_residues
MRWPLLPAYNVGRDRNRRCLEPAAVFGKNRAFKHGEEWKCDRLNEGGSFIMTGHDSMAMANDGTSEVIVMLRGLYTAASG
MLAQQRRVDWLTNNLANAETPGYKADAGAMRAFPELLMNRLEDESIPSAPPRAVPTQTAIGLLNTGVYTQELIPNFRQGD
IKETGLSTDVALVDGQVPVDPTTGERGTLFFAVENDQGETRYTRNGHFTLSPDDYLTTQDGWYVLDGNGERIAIPSESFT
VRDDGTITAENRTIARLGVVFAANPKTVVKEGNGLFRSTDGPLPQAPGNVTYMVKQGFIERSNVDIERTMTDLLAAYRAF
EANQKIIQAYDRSLDKAVNEVGRLK

Sequences:

>Translated_345_residues
MRWPLLPAYNVGRDRNRRCLEPAAVFGKNRAFKHGEEWKCDRLNEGGSFIMTGHDSMAMANDGTSEVIVMLRGLYTAASG
MLAQQRRVDWLTNNLANAETPGYKADAGAMRAFPELLMNRLEDESIPSAPPRAVPTQTAIGLLNTGVYTQELIPNFRQGD
IKETGLSTDVALVDGQVPVDPTTGERGTLFFAVENDQGETRYTRNGHFTLSPDDYLTTQDGWYVLDGNGERIAIPSESFT
VRDDGTITAENRTIARLGVVFAANPKTVVKEGNGLFRSTDGPLPQAPGNVTYMVKQGFIERSNVDIERTMTDLLAAYRAF
EANQKIIQAYDRSLDKAVNEVGRLK
>Mature_345_residues
MRWPLLPAYNVGRDRNRRCLEPAAVFGKNRAFKHGEEWKCDRLNEGGSFIMTGHDSMAMANDGTSEVIVMLRGLYTAASG
MLAQQRRVDWLTNNLANAETPGYKADAGAMRAFPELLMNRLEDESIPSAPPRAVPTQTAIGLLNTGVYTQELIPNFRQGD
IKETGLSTDVALVDGQVPVDPTTGERGTLFFAVENDQGETRYTRNGHFTLSPDDYLTTQDGWYVLDGNGERIAIPSESFT
VRDDGTITAENRTIARLGVVFAANPKTVVKEGNGLFRSTDGPLPQAPGNVTYMVKQGFIERSNVDIERTMTDLLAAYRAF
EANQKIIQAYDRSLDKAVNEVGRLK

Specific function: Not required for motility [H]

COG id: COG4786

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787318, Length=279, Percent_Identity=27.5985663082437, Blast_Score=91, Evalue=7e-20,
Organism=Escherichia coli, GI1787317, Length=286, Percent_Identity=32.1678321678322, Blast_Score=82, Evalue=6e-17,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR020013 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 38073; Mature: 38073

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRWPLLPAYNVGRDRNRRCLEPAAVFGKNRAFKHGEEWKCDRLNEGGSFIMTGHDSMAMA
CCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEC
NDGTSEVIVMLRGLYTAASGMLAQQRRVDWLTNNLANAETPGYKADAGAMRAFPELLMNR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHH
LEDESIPSAPPRAVPTQTAIGLLNTGVYTQELIPNFRQGDIKETGLSTDVALVDGQVPVD
HCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHCCCCCCCCCHHCCCCCCEEEECCCCCCC
PTTGERGTLFFAVENDQGETRYTRNGHFTLSPDDYLTTQDGWYVLDGNGERIAIPSESFT
CCCCCCCEEEEEEECCCCCCEEECCCEEEECCCCCEECCCCEEEECCCCCEEEECCCCEE
VRDDGTITAENRTIARLGVVFAANPKTVVKEGNGLFRSTDGPLPQAPGNVTYMVKQGFIE
EECCCEEEECCCEEEEEEEEEECCCCCEEECCCCEEECCCCCCCCCCCCEEEEEECCCCC
RSNVDIERTMTDLLAAYRAFEANQKIIQAYDRSLDKAVNEVGRLK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRWPLLPAYNVGRDRNRRCLEPAAVFGKNRAFKHGEEWKCDRLNEGGSFIMTGHDSMAMA
CCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEC
NDGTSEVIVMLRGLYTAASGMLAQQRRVDWLTNNLANAETPGYKADAGAMRAFPELLMNR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHH
LEDESIPSAPPRAVPTQTAIGLLNTGVYTQELIPNFRQGDIKETGLSTDVALVDGQVPVD
HCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHCCCCCCCCCHHCCCCCCEEEECCCCCCC
PTTGERGTLFFAVENDQGETRYTRNGHFTLSPDDYLTTQDGWYVLDGNGERIAIPSESFT
CCCCCCCEEEEEEECCCCCCEEECCCEEEECCCCCEECCCCEEEECCCCCEEEECCCCEE
VRDDGTITAENRTIARLGVVFAANPKTVVKEGNGLFRSTDGPLPQAPGNVTYMVKQGFIE
EECCCEEEECCCEEEEEEEEEECCCCCEEECCCCEEECCCCCCCCCCCCEEEEEECCCCC
RSNVDIERTMTDLLAAYRAFEANQKIIQAYDRSLDKAVNEVGRLK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7836311; 9353933; 9384377 [H]