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The map label for this gene is flhP [H]

Identifier: 138896904

GI number: 138896904

Start: 3382493

End: 3383314

Strand: Reverse

Name: flhP [H]

Synonym: GTNG_3273

Alternate gene names: 138896904

Gene position: 3383314-3382493 (Counterclockwise)

Preceding gene: 138896905

Following gene: 138896903

Centisome position: 95.3

GC content: 58.88

Gene sequence:

>822_bases
ATGCTCCGCTCGATGCACACCGCCGCCAACACGATGAACGCGTTGCAACAGCGGCTCGATACACTAAGCCATAACATCGT
CAACAGCAACACCACCGGATTTAAACGGCGCGAAGCGAGTTTTGCTGAGCTGTTGACCCAGCAAGTCGACCGCCTGCCGG
ATGACGAAGCGCCCCGCCAAACACCAGCTGGCGTGCGCTACGGCAACGGGGCGGGCCTTGCTTCGACGATGCTTGTCACC
GCTCAAGGGCCGCTCACCGAGACTGGTCGTGCACTCGATTTCGCTTTCACCGCTGCCAACCAATGGTTTCGCGTTCGAGT
CACCGATGGCAACGGCGTCGCAACGATCGGTTACACTCGCGCTGGCAACTTTTCATTGACGCCCATAGGCGATCGTCTTG
CTCTTGTGACAAGCGATGGTCGCCCAGTGCTTGATGAAACGAACGCGCCCATCGAGCTGCCGGCTCATGCGACCGGCTTT
CAACTGTCCCCGACCGGGACGTTGACGGCCACCGATGCTAACGGCGCGGTTGTCGCCCGCGTCAACCTAGGCGTCACTGT
CATCCGCCGCCCGCAGCTCCTTGAAGCATTGGGGGACAATGTCTTCACGCTTCCCACTGCCCCAGGTGCCACTCAGGAGC
TGAACGGCAACTTGCGCAGCCAAATCGCGATGAAACAAGGGGCGCTCGAACAGTCCAATGTGGACCTTGGTGAAGAACTG
ATCGGTTTGATGGCGACAACTCGCGCCTATCAGCTGAACGCCCGCGCCATTTCCATTTCTGAACAAATGCTCGGGCTCAT
TAACAATTTGCGCTCCTCATAA

Upstream 100 bases:

>100_bases
CTTTGAAGCGAACCAAAAAATCATCCAAGCGTACGACCGCAGTTTAGACAAGGCCGTCAATGAAGTCGGCCGCTTGAAAT
GATAAAAGGGGGACAAGCTC

Downstream 100 bases:

>100_bases
GGAGAGATCGACATGAGCAATGAAACGAAAAACGAACCGCTCTCCCGCGTCGCGCGGCGAAAGGAGCGAGAACAACAACG
TTCCGCCAAACGCGCACTCG

Product: flagellar hook-basal body protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MLRSMHTAANTMNALQQRLDTLSHNIVNSNTTGFKRREASFAELLTQQVDRLPDDEAPRQTPAGVRYGNGAGLASTMLVT
AQGPLTETGRALDFAFTAANQWFRVRVTDGNGVATIGYTRAGNFSLTPIGDRLALVTSDGRPVLDETNAPIELPAHATGF
QLSPTGTLTATDANGAVVARVNLGVTVIRRPQLLEALGDNVFTLPTAPGATQELNGNLRSQIAMKQGALEQSNVDLGEEL
IGLMATTRAYQLNARAISISEQMLGLINNLRSS

Sequences:

>Translated_273_residues
MLRSMHTAANTMNALQQRLDTLSHNIVNSNTTGFKRREASFAELLTQQVDRLPDDEAPRQTPAGVRYGNGAGLASTMLVT
AQGPLTETGRALDFAFTAANQWFRVRVTDGNGVATIGYTRAGNFSLTPIGDRLALVTSDGRPVLDETNAPIELPAHATGF
QLSPTGTLTATDANGAVVARVNLGVTVIRRPQLLEALGDNVFTLPTAPGATQELNGNLRSQIAMKQGALEQSNVDLGEEL
IGLMATTRAYQLNARAISISEQMLGLINNLRSS
>Mature_273_residues
MLRSMHTAANTMNALQQRLDTLSHNIVNSNTTGFKRREASFAELLTQQVDRLPDDEAPRQTPAGVRYGNGAGLASTMLVT
AQGPLTETGRALDFAFTAANQWFRVRVTDGNGVATIGYTRAGNFSLTPIGDRLALVTSDGRPVLDETNAPIELPAHATGF
QLSPTGTLTATDANGAVVARVNLGVTVIRRPQLLEALGDNVFTLPTAPGATQELNGNLRSQIAMKQGALEQSNVDLGEEL
IGLMATTRAYQLNARAISISEQMLGLINNLRSS

Specific function: Unknown

COG id: COG4786

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787318, Length=267, Percent_Identity=31.8352059925094, Blast_Score=120, Evalue=8e-29,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR020013 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 29085; Mature: 29085

Theoretical pI: Translated: 6.28; Mature: 6.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRSMHTAANTMNALQQRLDTLSHNIVNSNTTGFKRREASFAELLTQQVDRLPDDEAPRQ
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
TPAGVRYGNGAGLASTMLVTAQGPLTETGRALDFAFTAANQWFRVRVTDGNGVATIGYTR
CCCCCEECCCCCCHHEEEEEECCCCCCCCCEEEEEEEECCCEEEEEEECCCCEEEEEEEE
AGNFSLTPIGDRLALVTSDGRPVLDETNAPIELPAHATGFQLSPTGTLTATDANGAVVAR
CCCEEECCCCCEEEEEECCCCCCCCCCCCCEECCCCCCCEEECCCCEEEEECCCCEEEEE
VNLGVTVIRRPQLLEALGDNVFTLPTAPGATQELNGNLRSQIAMKQGALEQSNVDLGEEL
EECCEEEEECHHHHHHHCCCEEEECCCCCCHHHHCCCHHHHHHHHHCCCCCCCCCHHHHH
IGLMATTRAYQLNARAISISEQMLGLINNLRSS
HHHHHHHHEEEECCEEEEHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLRSMHTAANTMNALQQRLDTLSHNIVNSNTTGFKRREASFAELLTQQVDRLPDDEAPRQ
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
TPAGVRYGNGAGLASTMLVTAQGPLTETGRALDFAFTAANQWFRVRVTDGNGVATIGYTR
CCCCCEECCCCCCHHEEEEEECCCCCCCCCEEEEEEEECCCEEEEEEECCCCEEEEEEEE
AGNFSLTPIGDRLALVTSDGRPVLDETNAPIELPAHATGFQLSPTGTLTATDANGAVVAR
CCCEEECCCCCEEEEEECCCCCCCCCCCCCEECCCCCCCEEECCCCEEEEECCCCEEEEE
VNLGVTVIRRPQLLEALGDNVFTLPTAPGATQELNGNLRSQIAMKQGALEQSNVDLGEEL
EECCEEEEECHHHHHHHCCCEEEECCCCCCHHHHCCCHHHHHHHHHCCCCCCCCCHHHHH
IGLMATTRAYQLNARAISISEQMLGLINNLRSS
HHHHHHHHEEEECCEEEEHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377; 7836311 [H]