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The map label for this gene is yajF [C]

Identifier: 138896875

GI number: 138896875

Start: 3354279

End: 3355181

Strand: Reverse

Name: yajF [C]

Synonym: GTNG_3240

Alternate gene names: 138896875

Gene position: 3355181-3354279 (Counterclockwise)

Preceding gene: 138896876

Following gene: 138896873

Centisome position: 94.5

GC content: 41.42

Gene sequence:

>903_bases
ATGAATCGGAAATATATCGCATTTGATATTGGGGGAACATTCGTCAAGAGCGGAGTGATCGATGGCGACGGAAAAATGAT
TGATAAAACAAAAGAAAAAACCCCAAATCATTTGGAGGAACTTTTAGCGCTCATTGAACAAAGAGCTCTAGAACACGAGG
ATGTTGAGGGGATTGCTATTAGCACTCCAGGAGCAGTTTCCCCTGAGGGGGTTATATACGGTTCAAGTGCCATTCCCTAT
ATTCATGGGCCAAATATGAAAGAACTGGTTCAAAGAAGAGTGAAAAAACCCGTTTTTTTAGAGAATGATGCCAATTGTGC
AGGACTTGCGGAAATGTGGCGTGGAGCAGGTGTGGGGAAGAAAGATGTTTTAGTTGTTGTGATTGGTACTGGAATCGGCG
GGGCTGTTTTTAAAAATGGTCATTTACATAAAGGGGGTCATTTGCATGGAGGAGAATTCGGATACATGCTCCTAACCACA
GACATCAAAGGGGACAATGATGTTTGGTCAAGGATTGCCTCAACAAAGGCGCTAGTACGCACGGTAGCACGGTTAAAAAA
CATCGATGAGAATGCCATTGATGGGGAAGAGATTTTTAGATTAGCGAAAAAGGGAGATGAAGTTTGTCTTCAGGCACTGG
ATCGATTCTATCATTATTTAGCCGTAGGTATTTACAACTTGCAGTATATTTATGATCCAGAAATTATCCTCATTGGCGGG
GGAATTAGTGCAAACAATGAACTCATACCAAGAATTAACGAGAAGTTGGAGCAAATCCTGTCAGTGATCCATTTGGCAAA
GATGAAACCTCAAATTGCTCCTTGTCATTTTCGTCAAGATGCGAATCTTTTGGGGGCGGTTTATGGATTTATCAGAGAGT
ATTCCAATATAGGTTCAACATAA

Upstream 100 bases:

>100_bases
ACGTGTGACTAACTATCCATGAAAAATTAAGTATCACTTTTCGTTTTCAGAGCAACATCATTCACGTGGATTCGATTTGT
TCATTTTTAGGAGTGGAAAG

Downstream 100 bases:

>100_bases
ACCAAATCAGTTGTGCTCCTGTTGTGGATGCTAGCAGGAAGAGGTGAAATGGTGGCCTATCCGTGATACGCGAGTGGGTG
TGCTCACCATACGAGAATCA

Product: sugar kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:

>300_residues
MNRKYIAFDIGGTFVKSGVIDGDGKMIDKTKEKTPNHLEELLALIEQRALEHEDVEGIAISTPGAVSPEGVIYGSSAIPY
IHGPNMKELVQRRVKKPVFLENDANCAGLAEMWRGAGVGKKDVLVVVIGTGIGGAVFKNGHLHKGGHLHGGEFGYMLLTT
DIKGDNDVWSRIASTKALVRTVARLKNIDENAIDGEEIFRLAKKGDEVCLQALDRFYHYLAVGIYNLQYIYDPEIILIGG
GISANNELIPRINEKLEQILSVIHLAKMKPQIAPCHFRQDANLLGAVYGFIREYSNIGST

Sequences:

>Translated_300_residues
MNRKYIAFDIGGTFVKSGVIDGDGKMIDKTKEKTPNHLEELLALIEQRALEHEDVEGIAISTPGAVSPEGVIYGSSAIPY
IHGPNMKELVQRRVKKPVFLENDANCAGLAEMWRGAGVGKKDVLVVVIGTGIGGAVFKNGHLHKGGHLHGGEFGYMLLTT
DIKGDNDVWSRIASTKALVRTVARLKNIDENAIDGEEIFRLAKKGDEVCLQALDRFYHYLAVGIYNLQYIYDPEIILIGG
GISANNELIPRINEKLEQILSVIHLAKMKPQIAPCHFRQDANLLGAVYGFIREYSNIGST
>Mature_300_residues
MNRKYIAFDIGGTFVKSGVIDGDGKMIDKTKEKTPNHLEELLALIEQRALEHEDVEGIAISTPGAVSPEGVIYGSSAIPY
IHGPNMKELVQRRVKKPVFLENDANCAGLAEMWRGAGVGKKDVLVVVIGTGIGGAVFKNGHLHKGGHLHGGEFGYMLLTT
DIKGDNDVWSRIASTKALVRTVARLKNIDENAIDGEEIFRLAKKGDEVCLQALDRFYHYLAVGIYNLQYIYDPEIILIGG
GISANNELIPRINEKLEQILSVIHLAKMKPQIAPCHFRQDANLLGAVYGFIREYSNIGST

Specific function: Unknown

COG id: COG1940

COG function: function code KG; Transcriptional regulator/sugar kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ROK (nagC/xylR) family [H]

Homologues:

Organism=Homo sapiens, GI298566325, Length=265, Percent_Identity=25.2830188679245, Blast_Score=72, Evalue=8e-13,
Organism=Homo sapiens, GI298566315, Length=265, Percent_Identity=25.2830188679245, Blast_Score=72, Evalue=8e-13,
Organism=Homo sapiens, GI190014632, Length=265, Percent_Identity=25.2830188679245, Blast_Score=72, Evalue=9e-13,
Organism=Homo sapiens, GI4885285, Length=265, Percent_Identity=25.2830188679245, Blast_Score=71, Evalue=9e-13,
Organism=Escherichia coli, GI87081733, Length=270, Percent_Identity=25.1851851851852, Blast_Score=96, Evalue=3e-21,
Organism=Escherichia coli, GI1787363, Length=283, Percent_Identity=26.8551236749117, Blast_Score=94, Evalue=1e-20,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000600 [H]

Pfam domain/function: PF00480 ROK [H]

EC number: NA

Molecular weight: Translated: 32908; Mature: 32908

Theoretical pI: Translated: 6.86; Mature: 6.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRKYIAFDIGGTFVKSGVIDGDGKMIDKTKEKTPNHLEELLALIEQRALEHEDVEGIAI
CCCCEEEEECCCHHHHCCEECCCCCEECCHHHCCHHHHHHHHHHHHHHHCCCCCCCEEEE
STPGAVSPEGVIYGSSAIPYIHGPNMKELVQRRVKKPVFLENDANCAGLAEMWRGAGVGK
ECCCCCCCCCEEECCCCCCEEECCCHHHHHHHHHCCCEEEECCCCHHHHHHHHHCCCCCC
KDVLVVVIGTGIGGAVFKNGHLHKGGHLHGGEFGYMLLTTDIKGDNDVWSRIASTKALVR
CCEEEEEEECCCCCHHCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHH
TVARLKNIDENAIDGEEIFRLAKKGDEVCLQALDRFYHYLAVGIYNLQYIYDPEIILIGG
HHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHEEEEECCCEEEEEC
GISANNELIPRINEKLEQILSVIHLAKMKPQIAPCHFRQDANLLGAVYGFIREYSNIGST
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNRKYIAFDIGGTFVKSGVIDGDGKMIDKTKEKTPNHLEELLALIEQRALEHEDVEGIAI
CCCCEEEEECCCHHHHCCEECCCCCEECCHHHCCHHHHHHHHHHHHHHHCCCCCCCEEEE
STPGAVSPEGVIYGSSAIPYIHGPNMKELVQRRVKKPVFLENDANCAGLAEMWRGAGVGK
ECCCCCCCCCEEECCCCCCEEECCCHHHHHHHHHCCCEEEECCCCHHHHHHHHHCCCCCC
KDVLVVVIGTGIGGAVFKNGHLHKGGHLHGGEFGYMLLTTDIKGDNDVWSRIASTKALVR
CCEEEEEEECCCCCHHCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHH
TVARLKNIDENAIDGEEIFRLAKKGDEVCLQALDRFYHYLAVGIYNLQYIYDPEIILIGG
HHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHEEEEECCCEEEEEC
GISANNELIPRINEKLEQILSVIHLAKMKPQIAPCHFRQDANLLGAVYGFIREYSNIGST
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11792842; 8177218 [H]