| Definition | Geobacillus thermodenitrificans NG80-2 chromosome, complete genome. |
|---|---|
| Accession | NC_009328 |
| Length | 3,550,319 |
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The map label for this gene is mngB [H]
Identifier: 138896853
GI number: 138896853
Start: 3322802
End: 3325252
Strand: Reverse
Name: mngB [H]
Synonym: GTNG_3216
Alternate gene names: 138896853
Gene position: 3325252-3322802 (Counterclockwise)
Preceding gene: 138896854
Following gene: 138896852
Centisome position: 93.66
GC content: 46.14
Gene sequence:
>2451_bases ATGAAAAAACTGATTGAGCAGCGGAGGCTTTTTATCGGGCCTTGGTATACACAGACGGATTCGCTTCTTGTCCACAAAGA GTCAATGATTCGAAACTTGCTTTACGGAACGAAAATAGCCCAAAGCATGGGTCATAGCATGGAAATCGGTTATTTACCAG ATATCTTTGGACAAAACGGCTATTTGCCTTCCATTTTTCGCGGCTTTGGGCTTGAATTTAGCATTTTGCAACGAGGAGTT TACACAGAGCAGTTAAATGGGGATGTCAATTTTATTTGGAAATCTCCTGATGGGCAGTCGGTGAAGGCCAATCACCTTTA TTTCGGCTACGGCCCGGGAAAATTTTTATCATCTGATCAGGAGTATGTAGAGAATCGACTGATTCCGATCATTGAAAAGT TAGAGGAAGTGAACGAGCACTGTGATCATTTGTTATTGCCTGCCGGTGGGGATCAGGTACTTGTGCGCGAGCATTTTCCC GAGACCGTCGCTCAGTTAAATCGTATCGATCCAAAGCGGGAATACGTGTTATCCGATTACGAGACGTTTATGAAGGAGGC TTGGGCGGGCGAGCCGTTTCCAAATGTGATTGAGGGAGAATTGCTGGCATCGCAACGCTCACGCATCCACCATACGATTC GTTCGCAACGGTACGATATTAAGCAGAAAAATGCCATCATTGAACATAAGCTTTTACATGTGCTTGAACCACTTGCGGTG ATTGGACAAGCGTTAGGGTTGTCGTATCCGAAAAGATGGCTCGATCAAATGTGGAAGCAGTTGTTTGACGTTCACGCCCA TGACAGCATTGGCGGCTGCAACTCGGACGAAACGAATCGAGATATTGTTCACCGCCTTGAGAAATTAGAACGAATGGCAG ACGGTCTTGTGAATCTATTGAAAAAACGAATCACTTATGCGATTAGCCGCCAGACGGGGAACGAAAATATTTACGTTGCT TTTAATCTGTTGCCACGTCCGTTTTCCGGACTGATTGATGGCGTGATATTTACAAAAGACCCACACTTCCAACTGGTGAC CAACGATGGGAAAGGCGTTCCGGCGGAAATCGTTGAGCAACACTATTTGCCGGGCGGAAAACAAATTGTGGTGACCGCAG AGGGAGAAAAAGAGATCGACGTACAAGGGTACTATCGAACGGTTGTGCGTCTGCAAGTTGACCATGTGCCAGCGCTGGGC TATTGCACATACCAGGTGATTGAGGGAACGGAAGGTTGTGAAAAGCGAATCCTCGATCAAGAGACTCGGATTGAAAACGA ATATTTGGCACTGTCCTATGAACAAGGGACATTGCGGTTGCACCATCAACCATCCGGTGAGACGGTGACGAATTTTATCC GTTTTGAAAATACAGGGGATGCGGGTGATTCATACGACTACTCTCCGCTTGAAGGAGATAAACCGATTTATATGGAAAAA GCGGAGCTTCTCTCTGTCGAAAAAGGGCCTTTGACAGAAAAGATGGTTGTTCGGCACATTGGAGTGATCCCTTCTTGTTT ATCGGAGCGGGAGAAAGGGGAATGTTCAAGTAAACTGGAAATCATCACCTCTTTTGAATTGAGAAAAGGGGAAGAAATCA TCCGTGTTTGTCACCAGCTAGAGAATCAAGCGGAAGATCATCGGCTTCGCGTGTTGTTAACCGCTCCGGTGGCCGGTGCT AAGACATCATTTGCGGATCAAGCTTTCAGTTTAGTAGAGCGCCCTGTGGAGAGTAAGTATTTAACCAATTGGCGTGAGAA ACGATTTGCTGAAGCCCCTGTGCCGATTTATCCACTTGAGAATGCGGCTGGGCTTTATGATGACCGCTTCGTGTTTGCGG CGTTGACCAAAGGGATGAAAGAGTATGAAGTACTGACGGAAACAAACGAGCTAGCGCTCACATTATTCCGCAGTGTCGGT GTGCTTGGCAAAGATGATTTGCTTTGGCGTCCGGGCCGTGCCTCAGGCATTAATAACAAAGTCGTGTATACGCCTGATGC GCAAATGAAAAAGAAGATGGATTTTGAATATGCGATATACATGGCCAACGAGACGCTGAACCCAGCGAAAATTTTTGCGC ATATTGACCGGTATCGGGGCCATTTTGCCTCTTATCAAAGACAGCAGCTCAATACATTTGAAGAGCGGTTGGAACGGTTC GAGATCCCGTACCCGATCGAGCAAGCACCGGAATCGTTTTCTTTGCTAGAAGTGGATCGGGAAGATGTGTTTATGAGTGT GTGCAAACAGGCACACGATGATTCGTCCATTATCGTTCGTTTCTTTAACCCGACATGCGAAAGAAAGACGGTGATGGTAA AAAGCAACCACATAAAAGAAATCGAAGAAACTAATTTAGCTGAAGAAACCATTCGGACGATGGAAGGGCCGTTTGTTGTC GATGGAAAAGGGTATATGACATTGAAATTGAAGGGGACGAACATGTCATGA
Upstream 100 bases:
>100_bases TGTGTTGGAACGGGATGAAACGTATTCTGCCTATGTGTTTGACGGACAGTCTTCCATCGTGGAAGAGTATTTGAACATTC GCCCAGAGAACCGGGAGCGG
Downstream 100 bases:
>100_bases GGAAACAAACTATATTGCCGCAGCTAGAGGAAAAGCTGAAAACCATATATGGCGAGCAATACAATGACGAGTATTTGATG GCTTTTCAAGCGCTCATTGA
Product: alpha-mannosidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 816; Mature: 816
Protein sequence:
>816_residues MKKLIEQRRLFIGPWYTQTDSLLVHKESMIRNLLYGTKIAQSMGHSMEIGYLPDIFGQNGYLPSIFRGFGLEFSILQRGV YTEQLNGDVNFIWKSPDGQSVKANHLYFGYGPGKFLSSDQEYVENRLIPIIEKLEEVNEHCDHLLLPAGGDQVLVREHFP ETVAQLNRIDPKREYVLSDYETFMKEAWAGEPFPNVIEGELLASQRSRIHHTIRSQRYDIKQKNAIIEHKLLHVLEPLAV IGQALGLSYPKRWLDQMWKQLFDVHAHDSIGGCNSDETNRDIVHRLEKLERMADGLVNLLKKRITYAISRQTGNENIYVA FNLLPRPFSGLIDGVIFTKDPHFQLVTNDGKGVPAEIVEQHYLPGGKQIVVTAEGEKEIDVQGYYRTVVRLQVDHVPALG YCTYQVIEGTEGCEKRILDQETRIENEYLALSYEQGTLRLHHQPSGETVTNFIRFENTGDAGDSYDYSPLEGDKPIYMEK AELLSVEKGPLTEKMVVRHIGVIPSCLSEREKGECSSKLEIITSFELRKGEEIIRVCHQLENQAEDHRLRVLLTAPVAGA KTSFADQAFSLVERPVESKYLTNWREKRFAEAPVPIYPLENAAGLYDDRFVFAALTKGMKEYEVLTETNELALTLFRSVG VLGKDDLLWRPGRASGINNKVVYTPDAQMKKKMDFEYAIYMANETLNPAKIFAHIDRYRGHFASYQRQQLNTFEERLERF EIPYPIEQAPESFSLLEVDREDVFMSVCKQAHDDSSIIVRFFNPTCERKTVMVKSNHIKEIEETNLAEETIRTMEGPFVV DGKGYMTLKLKGTNMS
Sequences:
>Translated_816_residues MKKLIEQRRLFIGPWYTQTDSLLVHKESMIRNLLYGTKIAQSMGHSMEIGYLPDIFGQNGYLPSIFRGFGLEFSILQRGV YTEQLNGDVNFIWKSPDGQSVKANHLYFGYGPGKFLSSDQEYVENRLIPIIEKLEEVNEHCDHLLLPAGGDQVLVREHFP ETVAQLNRIDPKREYVLSDYETFMKEAWAGEPFPNVIEGELLASQRSRIHHTIRSQRYDIKQKNAIIEHKLLHVLEPLAV IGQALGLSYPKRWLDQMWKQLFDVHAHDSIGGCNSDETNRDIVHRLEKLERMADGLVNLLKKRITYAISRQTGNENIYVA FNLLPRPFSGLIDGVIFTKDPHFQLVTNDGKGVPAEIVEQHYLPGGKQIVVTAEGEKEIDVQGYYRTVVRLQVDHVPALG YCTYQVIEGTEGCEKRILDQETRIENEYLALSYEQGTLRLHHQPSGETVTNFIRFENTGDAGDSYDYSPLEGDKPIYMEK AELLSVEKGPLTEKMVVRHIGVIPSCLSEREKGECSSKLEIITSFELRKGEEIIRVCHQLENQAEDHRLRVLLTAPVAGA KTSFADQAFSLVERPVESKYLTNWREKRFAEAPVPIYPLENAAGLYDDRFVFAALTKGMKEYEVLTETNELALTLFRSVG VLGKDDLLWRPGRASGINNKVVYTPDAQMKKKMDFEYAIYMANETLNPAKIFAHIDRYRGHFASYQRQQLNTFEERLERF EIPYPIEQAPESFSLLEVDREDVFMSVCKQAHDDSSIIVRFFNPTCERKTVMVKSNHIKEIEETNLAEETIRTMEGPFVV DGKGYMTLKLKGTNMS >Mature_816_residues MKKLIEQRRLFIGPWYTQTDSLLVHKESMIRNLLYGTKIAQSMGHSMEIGYLPDIFGQNGYLPSIFRGFGLEFSILQRGV YTEQLNGDVNFIWKSPDGQSVKANHLYFGYGPGKFLSSDQEYVENRLIPIIEKLEEVNEHCDHLLLPAGGDQVLVREHFP ETVAQLNRIDPKREYVLSDYETFMKEAWAGEPFPNVIEGELLASQRSRIHHTIRSQRYDIKQKNAIIEHKLLHVLEPLAV IGQALGLSYPKRWLDQMWKQLFDVHAHDSIGGCNSDETNRDIVHRLEKLERMADGLVNLLKKRITYAISRQTGNENIYVA FNLLPRPFSGLIDGVIFTKDPHFQLVTNDGKGVPAEIVEQHYLPGGKQIVVTAEGEKEIDVQGYYRTVVRLQVDHVPALG YCTYQVIEGTEGCEKRILDQETRIENEYLALSYEQGTLRLHHQPSGETVTNFIRFENTGDAGDSYDYSPLEGDKPIYMEK AELLSVEKGPLTEKMVVRHIGVIPSCLSEREKGECSSKLEIITSFELRKGEEIIRVCHQLENQAEDHRLRVLLTAPVAGA KTSFADQAFSLVERPVESKYLTNWREKRFAEAPVPIYPLENAAGLYDDRFVFAALTKGMKEYEVLTETNELALTLFRSVG VLGKDDLLWRPGRASGINNKVVYTPDAQMKKKMDFEYAIYMANETLNPAKIFAHIDRYRGHFASYQRQQLNTFEERLERF EIPYPIEQAPESFSLLEVDREDVFMSVCKQAHDDSSIIVRFFNPTCERKTVMVKSNHIKEIEETNLAEETIRTMEGPFVV DGKGYMTLKLKGTNMS
Specific function: May hydrolyze mannosyl-D-glycerate to mannose-6- phosphate and glycerate [H]
COG id: COG0383
COG function: function code G; Alpha-mannosidase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 38 family [H]
Homologues:
Organism=Escherichia coli, GI1786952, Length=818, Percent_Identity=32.2738386308068, Blast_Score=407, Evalue=1e-114,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011013 - InterPro: IPR011330 - InterPro: IPR011682 - InterPro: IPR015341 - InterPro: IPR000602 [H]
Pfam domain/function: PF09261 Alpha-mann_mid; PF01074 Glyco_hydro_38; PF07748 Glyco_hydro_38C [H]
EC number: NA
Molecular weight: Translated: 93443; Mature: 93443
Theoretical pI: Translated: 5.79; Mature: 5.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLIEQRRLFIGPWYTQTDSLLVHKESMIRNLLYGTKIAQSMGHSMEIGYLPDIFGQNG CHHHHHHCCEEECCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCEEECCCCHHCCCCC YLPSIFRGFGLEFSILQRGVYTEQLNGDVNFIWKSPDGQSVKANHLYFGYGPGKFLSSDQ CCHHHHHHCCCCHHHHHCCCHHHHCCCCEEEEEECCCCCCEEECEEEEECCCCCCCCCCH EYVENRLIPIIEKLEEVNEHCDHLLLPAGGDQVLVREHFPETVAQLNRIDPKREYVLSDY HHHHCCHHHHHHHHHHHHHHHCEEEECCCCCEEEEHHHCHHHHHHHHCCCCHHHHHHHHH ETFMKEAWAGEPFPNVIEGELLASQRSRIHHTIRSQRYDIKQKNAIIEHKLLHVLEPLAV HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH IGQALGLSYPKRWLDQMWKQLFDVHAHDSIGGCNSDETNRDIVHRLEKLERMADGLVNLL HHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH KKRITYAISRQTGNENIYVAFNLLPRPFSGLIDGVIFTKDPHFQLVTNDGKGVPAEIVEQ HHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHCCEEEECCCCEEEEECCCCCCCHHHHHH HYLPGGKQIVVTAEGEKEIDVQGYYRTVVRLQVDHVPALGYCTYQVIEGTEGCEKRILDQ HCCCCCCEEEEEECCCCCCCHHHHEEEEEEEEECCCCCCCCEEEEEECCCCHHHHHHCCH ETRIENEYLALSYEQGTLRLHHQPSGETVTNFIRFENTGDAGDSYDYSPLEGDKPIYMEK HHHCCCCEEEEEECCCEEEEEECCCCCHHHHHEEECCCCCCCCCCCCCCCCCCCCEEEEH AELLSVEKGPLTEKMVVRHIGVIPSCLSEREKGECSSKLEIITSFELRKGEEIIRVCHQL HHHHCCCCCCCHHHHHHHHHCHHHHHHHHHHCCCCCCCEEEEEEHHHHCCHHHHHHHHHH ENQAEDHRLRVLLTAPVAGAKTSFADQAFSLVERPVESKYLTNWREKRFAEAPVPIYPLE HCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEECC NAAGLYDDRFVFAALTKGMKEYEVLTETNELALTLFRSVGVLGKDDLLWRPGRASGINNK CCCCCCCCHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCC VVYTPDAQMKKKMDFEYAIYMANETLNPAKIFAHIDRYRGHFASYQRQQLNTFEERLERF EEECCCHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC EIPYPIEQAPESFSLLEVDREDVFMSVCKQAHDDSSIIVRFFNPTCERKTVMVKSNHIKE CCCCCHHHCCCCCCEEEECHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEEECCCHHH IEETNLAEETIRTMEGPFVVDGKGYMTLKLKGTNMS HHHHHHHHHHHHHCCCCEEECCCCEEEEEEECCCCC >Mature Secondary Structure MKKLIEQRRLFIGPWYTQTDSLLVHKESMIRNLLYGTKIAQSMGHSMEIGYLPDIFGQNG CHHHHHHCCEEECCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCEEECCCCHHCCCCC YLPSIFRGFGLEFSILQRGVYTEQLNGDVNFIWKSPDGQSVKANHLYFGYGPGKFLSSDQ CCHHHHHHCCCCHHHHHCCCHHHHCCCCEEEEEECCCCCCEEECEEEEECCCCCCCCCCH EYVENRLIPIIEKLEEVNEHCDHLLLPAGGDQVLVREHFPETVAQLNRIDPKREYVLSDY HHHHCCHHHHHHHHHHHHHHHCEEEECCCCCEEEEHHHCHHHHHHHHCCCCHHHHHHHHH ETFMKEAWAGEPFPNVIEGELLASQRSRIHHTIRSQRYDIKQKNAIIEHKLLHVLEPLAV HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH IGQALGLSYPKRWLDQMWKQLFDVHAHDSIGGCNSDETNRDIVHRLEKLERMADGLVNLL HHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH KKRITYAISRQTGNENIYVAFNLLPRPFSGLIDGVIFTKDPHFQLVTNDGKGVPAEIVEQ HHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHCCEEEECCCCEEEEECCCCCCCHHHHHH HYLPGGKQIVVTAEGEKEIDVQGYYRTVVRLQVDHVPALGYCTYQVIEGTEGCEKRILDQ HCCCCCCEEEEEECCCCCCCHHHHEEEEEEEEECCCCCCCCEEEEEECCCCHHHHHHCCH ETRIENEYLALSYEQGTLRLHHQPSGETVTNFIRFENTGDAGDSYDYSPLEGDKPIYMEK HHHCCCCEEEEEECCCEEEEEECCCCCHHHHHEEECCCCCCCCCCCCCCCCCCCCEEEEH AELLSVEKGPLTEKMVVRHIGVIPSCLSEREKGECSSKLEIITSFELRKGEEIIRVCHQL HHHHCCCCCCCHHHHHHHHHCHHHHHHHHHHCCCCCCCEEEEEEHHHHCCHHHHHHHHHH ENQAEDHRLRVLLTAPVAGAKTSFADQAFSLVERPVESKYLTNWREKRFAEAPVPIYPLE HCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEECC NAAGLYDDRFVFAALTKGMKEYEVLTETNELALTLFRSVGVLGKDDLLWRPGRASGINNK CCCCCCCCHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCC VVYTPDAQMKKKMDFEYAIYMANETLNPAKIFAHIDRYRGHFASYQRQQLNTFEERLERF EEECCCHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC EIPYPIEQAPESFSLLEVDREDVFMSVCKQAHDDSSIIVRFFNPTCERKTVMVKSNHIKE CCCCCHHHCCCCCCEEEECHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEEECCCHHH IEETNLAEETIRTMEGPFVVDGKGYMTLKLKGTNMS HHHHHHHHHHHHHCCCCEEECCCCEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8905232; 9278503; 9063979 [H]