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The map label for this gene is ydbD [H]

Identifier: 138896631

GI number: 138896631

Start: 3090636

End: 3091532

Strand: Reverse

Name: ydbD [H]

Synonym: GTNG_2994

Alternate gene names: 138896631

Gene position: 3091532-3090636 (Counterclockwise)

Preceding gene: 138896632

Following gene: 138896629

Centisome position: 87.08

GC content: 52.51

Gene sequence:

>897_bases
GTGTTTCAGAGGATTGATCGGTTGGCCATCGAATTGCCGCCACCGAAGTACGCGGACGCGAATGCGGCGGCCGCTGTTCA
AGAGCTGCTAGGCGGCCGCTTTGGGGAAATGTCCACGTTGAACAATTATTTGTTTCAGTCATTCAACTTTCGGCAAAAAT
CAAAACTGCGCCCGTTTTACGAACTGGTGGCGAGCATTACGGCGGAAGAATTCGGCCATGTCGAGCTTGTCGCCAATACG
ATCAACCTTTGTTTGACTGGGACCACCCACCCCGGCGATCCTGATTGTACACCGATGAGGGAGGCAAAAGACAAACGCAA
TTCGTATCATTTCATTGCCACCGCGCAAACCGCCTTTCCTGGTGATTCCATGGGCAATCCGTGGAAGGGAGAGTATGTGT
TCAACAGCGGCAACTTGATTTTGGATTTGCTTCATAACTTTTTCTTGGAATGCGGCGCGCGCACGCATAAAATGCGCGTG
TATGAAATGACGAACCATCCAACTGCCCGTGAGATGATCGGCTACTTGTTGGTGCGGGGCGGTGTTCATATTTTAGCGTA
TGCGAAAGCATTGGAAGTGGCGACTGGCGTTGATGTGAAGAAGATGTTGCCGATCCCGAAGTTAGATAACCGGGCGTTCG
ATGAAGCGCGCAAATATGAAGACCAAGGCCTCCATCGCCGTTTGTATACGTTCAGCGATCGATATTACAAGGAGATCGCC
CGCATTTGGCATGGGACGCATCCGAGTGACGGACAGCCGCTGGAAGTGGTGGAAGGCGCCCCGCAAGGAGGAACGATTCC
GGATTTGGATGCCGTGCCGGAAGAATTTGCCCCTGGCATTTCCATGGAAGACTTTTTGGACATTGGCAAGCGGCTGATGC
GTTCGGCTGGGTTGTAG

Upstream 100 bases:

>100_bases
CATCTCGTGCTTACGGCTCATCAAAAGGTGTATTATATTCGCTTGGCGCAAGTCGTTTCCGTTCACCTTGGCGACGTGGG
GAAAGGAGGAGCATACCGTG

Downstream 100 bases:

>100_bases
AAAAGCTGTTTGCGTTCATCTATCACCATCTTTGGGCATGGACGGATCGAGGGGTCCCTATATAAACGAGCCCCTCTTTT
TTCTATGCGCATCGATCCCA

Product: Mn catalase

Products: NA

Alternate protein names: General stress protein 80; GSP80 [H]

Number of amino acids: Translated: 298; Mature: 298

Protein sequence:

>298_residues
MFQRIDRLAIELPPPKYADANAAAAVQELLGGRFGEMSTLNNYLFQSFNFRQKSKLRPFYELVASITAEEFGHVELVANT
INLCLTGTTHPGDPDCTPMREAKDKRNSYHFIATAQTAFPGDSMGNPWKGEYVFNSGNLILDLLHNFFLECGARTHKMRV
YEMTNHPTAREMIGYLLVRGGVHILAYAKALEVATGVDVKKMLPIPKLDNRAFDEARKYEDQGLHRRLYTFSDRYYKEIA
RIWHGTHPSDGQPLEVVEGAPQGGTIPDLDAVPEEFAPGISMEDFLDIGKRLMRSAGL

Sequences:

>Translated_298_residues
MFQRIDRLAIELPPPKYADANAAAAVQELLGGRFGEMSTLNNYLFQSFNFRQKSKLRPFYELVASITAEEFGHVELVANT
INLCLTGTTHPGDPDCTPMREAKDKRNSYHFIATAQTAFPGDSMGNPWKGEYVFNSGNLILDLLHNFFLECGARTHKMRV
YEMTNHPTAREMIGYLLVRGGVHILAYAKALEVATGVDVKKMLPIPKLDNRAFDEARKYEDQGLHRRLYTFSDRYYKEIA
RIWHGTHPSDGQPLEVVEGAPQGGTIPDLDAVPEEFAPGISMEDFLDIGKRLMRSAGL
>Mature_298_residues
MFQRIDRLAIELPPPKYADANAAAAVQELLGGRFGEMSTLNNYLFQSFNFRQKSKLRPFYELVASITAEEFGHVELVANT
INLCLTGTTHPGDPDCTPMREAKDKRNSYHFIATAQTAFPGDSMGNPWKGEYVFNSGNLILDLLHNFFLECGARTHKMRV
YEMTNHPTAREMIGYLLVRGGVHILAYAKALEVATGVDVKKMLPIPKLDNRAFDEARKYEDQGLHRRLYTFSDRYYKEIA
RIWHGTHPSDGQPLEVVEGAPQGGTIPDLDAVPEEFAPGISMEDFLDIGKRLMRSAGL

Specific function: Unknown

COG id: COG3546

COG function: function code P; Mn-containing catalase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the manganese catalase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007760
- InterPro:   IPR012347
- InterPro:   IPR009078 [H]

Pfam domain/function: PF05067 Mn_catalase [H]

EC number: =1.11.1.6 [H]

Molecular weight: Translated: 33501; Mature: 33501

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFQRIDRLAIELPPPKYADANAAAAVQELLGGRFGEMSTLNNYLFQSFNFRQKSKLRPFY
CCCCHHHHEEECCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHCCHHH
ELVASITAEEFGHVELVANTINLCLTGTTHPGDPDCTPMREAKDKRNSYHFIATAQTAFP
HHHHHHHHHHCCCHHHHEEHHEEEEECCCCCCCCCCCCHHHHHHHCCCEEEEEEECCCCC
GDSMGNPWKGEYVFNSGNLILDLLHNFFLECGARTHKMRVYEMTNHPTAREMIGYLLVRG
CCCCCCCCCCCEEECCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHC
GVHILAYAKALEVATGVDVKKMLPIPKLDNRAFDEARKYEDQGLHRRLYTFSDRYYKEIA
CHHHHHHHHHHHHHCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RIWHGTHPSDGQPLEVVEGAPQGGTIPDLDAVPEEFAPGISMEDFLDIGKRLMRSAGL
HHHCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFQRIDRLAIELPPPKYADANAAAAVQELLGGRFGEMSTLNNYLFQSFNFRQKSKLRPFY
CCCCHHHHEEECCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHCCHHH
ELVASITAEEFGHVELVANTINLCLTGTTHPGDPDCTPMREAKDKRNSYHFIATAQTAFP
HHHHHHHHHHCCCHHHHEEHHEEEEECCCCCCCCCCCCHHHHHHHCCCEEEEEEECCCCC
GDSMGNPWKGEYVFNSGNLILDLLHNFFLECGARTHKMRVYEMTNHPTAREMIGYLLVRG
CCCCCCCCCCCEEECCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHC
GVHILAYAKALEVATGVDVKKMLPIPKLDNRAFDEARKYEDQGLHRRLYTFSDRYYKEIA
CHHHHHHHHHHHHHCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RIWHGTHPSDGQPLEVVEGAPQGGTIPDLDAVPEEFAPGISMEDFLDIGKRLMRSAGL
HHHCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 9298659 [H]