Definition | Geobacillus thermodenitrificans NG80-2 chromosome, complete genome. |
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Accession | NC_009328 |
Length | 3,550,319 |
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The map label for this gene is braC [H]
Identifier: 138896567
GI number: 138896567
Start: 3032371
End: 3033576
Strand: Reverse
Name: braC [H]
Synonym: GTNG_2930
Alternate gene names: 138896567
Gene position: 3033576-3032371 (Counterclockwise)
Preceding gene: 138896568
Following gene: 138896566
Centisome position: 85.45
GC content: 50.66
Gene sequence:
>1206_bases ATGGGGGGAAAACGAGTGAAAAAGAAAAAAGTAGCAGGTGTCTTTTTCTCGCTCATGCTGACAGCGGGTCTCATGGCCGG CTGCGGCGGCAACGAACAAAGCAGCGGCTCGACCGGCGGCAGCGGCGGTGGAGGTGGGGATGTCATTAAAATCGGCGCCA ACCTCGAGCTGTCCGGCGGGGTCGCTTCGTACGGACAGTCGATCGCTGAAGGGGTCGAGCTGGCGTTTGATGAAATCAAC AAAGAAGGAATCAATGGCAAAAAGTTAGAACTTGTCAAAGTCGATAACAAATCGGAAGCAGCCGAAGCGACGAACGGCGC GATCAAGTTGATCAGCCAAGATAAAGTCGTTGCGATTGTCGGCTCGGCAACGAGTACGAACACACTCGCTCAAGTGCAAA TCGCCAATGACAATAAAGTGCCGGTGATTACGCCGTCCGGTACGAACCCGACGATTACTACCAAAGACGGAAAAGTGAAT GATTTCATTTTCCGGACATGCTTTATCGACCCGTTCCAAGGAACGGTGGCGGCAAAATTCGCATTGGATGACTTGAAAGT GAAAAGTGCGGCGATTTTGATCGACAGCGCGAGCGATTACTCGAAAGGGCTGGCTGCGTCATTTAAAGAAACGTTTACAG CCGGCGGCGGCAAAATTGTTGCCGAAGAAGCGTATGTGGCGAAAGATACGGACTTCCGCGCCACGCTGACGAACATTAAA GCGGCCAATCCGGAATTTTTGTTCTTGCCGGGCTATTATGAAGAGGTTGGCCTCATCGTGAAACAAGCGCGTGAGCTTGG TTTGAACGTGCCGATCATGGGCGGCGACGGCTGGGATTCGCCGAAGTTGATTGAGATCGCCGGCAAAGATGCGTTGAACA ATACGTATATTACCAACCATTATTCATCCGGTGACCCGGATCCGAAAATTCAAGAGTTCGTCAAAGCGTTCGAAGCGAAA TACAATAAAGCGCCGGATGCCTTTAACGCGCTTGGCTACGATACGGCTTACTTCCTGGCGGATGCCATCAAACGGGCTGG CAGCGCCGATCCGGTGAAAATTAAAGACGCGCTGGCACAAACGAAAGATTTGCAGTTGGTGACTGGTATATTCACGATCA ATGAAAATCACGATCCGATCAAATCGGCAGTCATTTTGGAATACAAAGATGGGCAGCAACAATTCAAAACAAAAGTGAAC CCGTAA
Upstream 100 bases:
>100_bases TTCTCATGCAACCGCTCCTTCACGACTACAAGTGCGCATGCAGAGGGTTTTTCGCCGATACCGTTAAACTGCGCACTCCG ATGACAGAACATTATGAACA
Downstream 100 bases:
>100_bases TGAAAGGCTGGATGGAGTGCATGGGCGGGGGAGGGCGTCCCCCTGGGGGACGTCTTCCTGTCCAGCATTTCTTTTGGCAA ACGACGAGTTTTCGTTAAGG
Product: branched chain amino acid ABC transporter amino acid-binding protein
Products: ADP; phosphate; L-leucine [Cytoplasm] [C]
Alternate protein names: LIVAT-BP; Leu/Ile/Val/Thr/Ala-binding protein [H]
Number of amino acids: Translated: 401; Mature: 400
Protein sequence:
>401_residues MGGKRVKKKKVAGVFFSLMLTAGLMAGCGGNEQSSGSTGGSGGGGGDVIKIGANLELSGGVASYGQSIAEGVELAFDEIN KEGINGKKLELVKVDNKSEAAEATNGAIKLISQDKVVAIVGSATSTNTLAQVQIANDNKVPVITPSGTNPTITTKDGKVN DFIFRTCFIDPFQGTVAAKFALDDLKVKSAAILIDSASDYSKGLAASFKETFTAGGGKIVAEEAYVAKDTDFRATLTNIK AANPEFLFLPGYYEEVGLIVKQARELGLNVPIMGGDGWDSPKLIEIAGKDALNNTYITNHYSSGDPDPKIQEFVKAFEAK YNKAPDAFNALGYDTAYFLADAIKRAGSADPVKIKDALAQTKDLQLVTGIFTINENHDPIKSAVILEYKDGQQQFKTKVN P
Sequences:
>Translated_401_residues MGGKRVKKKKVAGVFFSLMLTAGLMAGCGGNEQSSGSTGGSGGGGGDVIKIGANLELSGGVASYGQSIAEGVELAFDEIN KEGINGKKLELVKVDNKSEAAEATNGAIKLISQDKVVAIVGSATSTNTLAQVQIANDNKVPVITPSGTNPTITTKDGKVN DFIFRTCFIDPFQGTVAAKFALDDLKVKSAAILIDSASDYSKGLAASFKETFTAGGGKIVAEEAYVAKDTDFRATLTNIK AANPEFLFLPGYYEEVGLIVKQARELGLNVPIMGGDGWDSPKLIEIAGKDALNNTYITNHYSSGDPDPKIQEFVKAFEAK YNKAPDAFNALGYDTAYFLADAIKRAGSADPVKIKDALAQTKDLQLVTGIFTINENHDPIKSAVILEYKDGQQQFKTKVN P >Mature_400_residues GGKRVKKKKVAGVFFSLMLTAGLMAGCGGNEQSSGSTGGSGGGGGDVIKIGANLELSGGVASYGQSIAEGVELAFDEINK EGINGKKLELVKVDNKSEAAEATNGAIKLISQDKVVAIVGSATSTNTLAQVQIANDNKVPVITPSGTNPTITTKDGKVND FIFRTCFIDPFQGTVAAKFALDDLKVKSAAILIDSASDYSKGLAASFKETFTAGGGKIVAEEAYVAKDTDFRATLTNIKA ANPEFLFLPGYYEEVGLIVKQARELGLNVPIMGGDGWDSPKLIEIAGKDALNNTYITNHYSSGDPDPKIQEFVKAFEAKY NKAPDAFNALGYDTAYFLADAIKRAGSADPVKIKDALAQTKDLQLVTGIFTINENHDPIKSAVILEYKDGQQQFKTKVNP
Specific function: Component of the high-affinity leucine, isoleucine, valine transport system I (LIV-I), which is operative without Na(+) and is specific for alanine and threonine, in addition to branched-chain amino acids [H]
COG id: COG0683
COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the leucine-binding protein family [H]
Homologues:
Organism=Escherichia coli, GI1789867, Length=322, Percent_Identity=31.9875776397516, Blast_Score=132, Evalue=3e-32, Organism=Escherichia coli, GI48994941, Length=331, Percent_Identity=30.5135951661631, Blast_Score=123, Evalue=2e-29,
Paralogues:
None
Copy number: 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001828 - InterPro: IPR000709 [H]
Pfam domain/function: PF01094 ANF_receptor [H]
EC number: NA
Molecular weight: Translated: 42315; Mature: 42184
Theoretical pI: Translated: 5.34; Mature: 5.34
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGKRVKKKKVAGVFFSLMLTAGLMAGCGGNEQSSGSTGGSGGGGGDVIKIGANLELSGG CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCEEECCC VASYGQSIAEGVELAFDEINKEGINGKKLELVKVDNKSEAAEATNGAIKLISQDKVVAIV HHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCHHHHCCCCEEEEEECCCEEEEE GSATSTNTLAQVQIANDNKVPVITPSGTNPTITTKDGKVNDFIFRTCFIDPFQGTVAAKF ECCCCCCEEEEEEECCCCCEEEEECCCCCCEEEECCCCCCCEEEEEEEECCCCCCEEEEE ALDDLKVKSAAILIDSASDYSKGLAASFKETFTAGGGKIVAEEAYVAKDTDFRATLTNIK EHHHHEEEEEEEEEECCCCHHHHHHHHHHHHHCCCCCEEEECCEEEECCCCCEEEEECCC AANPEFLFLPGYYEEVGLIVKQARELGLNVPIMGGDGWDSPKLIEIAGKDALNNTYITNH CCCCCEEEECCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEECCCCCCCCEEEEC YSSGDPDPKIQEFVKAFEAKYNKAPDAFNALGYDTAYFLADAIKRAGSADPVKIKDALAQ CCCCCCCHHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHHHCCCCCCEEHHHHHHC TKDLQLVTGIFTINENHDPIKSAVILEYKDGQQQFKTKVNP CCCCEEEEEEEEECCCCCCCCEEEEEEECCCHHHHHCCCCC >Mature Secondary Structure GGKRVKKKKVAGVFFSLMLTAGLMAGCGGNEQSSGSTGGSGGGGGDVIKIGANLELSGG CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCEEECCC VASYGQSIAEGVELAFDEINKEGINGKKLELVKVDNKSEAAEATNGAIKLISQDKVVAIV HHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCHHHHCCCCEEEEEECCCEEEEE GSATSTNTLAQVQIANDNKVPVITPSGTNPTITTKDGKVNDFIFRTCFIDPFQGTVAAKF ECCCCCCEEEEEEECCCCCEEEEECCCCCCEEEECCCCCCCEEEEEEEECCCCCCEEEEE ALDDLKVKSAAILIDSASDYSKGLAASFKETFTAGGGKIVAEEAYVAKDTDFRATLTNIK EHHHHEEEEEEEEEECCCCHHHHHHHHHHHHHCCCCCEEEECCEEEECCCCCEEEEECCC AANPEFLFLPGYYEEVGLIVKQARELGLNVPIMGGDGWDSPKLIEIAGKDALNNTYITNH CCCCCEEEECCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEECCCCCCCCEEEEC YSSGDPDPKIQEFVKAFEAKYNKAPDAFNALGYDTAYFLADAIKRAGSADPVKIKDALAQ CCCCCCCHHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHHHCCCCCCEEHHHHHHC TKDLQLVTGIFTINENHDPIKSAVILEYKDGQQQFKTKVNP CCCCEEEEEEEEECCCCCCCCEEEEEEECCCHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2509433; 2120183; 10984043 [H]