Definition Geobacillus thermodenitrificans NG80-2 chromosome, complete genome.
Accession NC_009328
Length 3,550,319

Click here to switch to the map view.

The map label for this gene is 138896545

Identifier: 138896545

GI number: 138896545

Start: 3014644

End: 3014910

Strand: Reverse

Name: 138896545

Synonym: GTNG_2908

Alternate gene names: NA

Gene position: 3014910-3014644 (Counterclockwise)

Preceding gene: 138896547

Following gene: 138896544

Centisome position: 84.92

GC content: 45.69

Gene sequence:

>267_bases
ATGGGAATCAGGAAGGTGAACACACCCATGATCTTACCAATCATCGAGTTTTGCATCAGCAACTTAGCAAGCGGATCGCA
GAAAGCGATGGAAATACTCGAAAAAGATCCGAATTTGGATATTATCGAATACAGCTGCTTAAGCTATTGCACGCGTTGCG
CCGATACGTTGTTTGCGCTCGTGAACGGCGAGTTTGTCAGCGGTGAGACGCCAGAGCAGCTTGTGGAAAATATTTATCGG
CATCTTGAGGAAAACCCGATGTTTTAA

Upstream 100 bases:

>100_bases
CATAAAAAAGTATAGCGAAATTGTGACAAAAGAACAACAATTTTTCTGTCCAACCGCCTAGCGTGCATGTTCGTTGACGC
CGTGGCGCAAAACCGCTACG

Downstream 100 bases:

>100_bases
CGTAAAAAGGAGGATGCCCACAAGGTGGCATCCTCTTCAATGTATATGAAAAAACGGGGGATATTCCCATTTTGTCCAAG
GGGCGGTATTGTTATACATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 88; Mature: 87

Protein sequence:

>88_residues
MGIRKVNTPMILPIIEFCISNLASGSQKAMEILEKDPNLDIIEYSCLSYCTRCADTLFALVNGEFVSGETPEQLVENIYR
HLEENPMF

Sequences:

>Translated_88_residues
MGIRKVNTPMILPIIEFCISNLASGSQKAMEILEKDPNLDIIEYSCLSYCTRCADTLFALVNGEFVSGETPEQLVENIYR
HLEENPMF
>Mature_87_residues
GIRKVNTPMILPIIEFCISNLASGSQKAMEILEKDPNLDIIEYSCLSYCTRCADTLFALVNGEFVSGETPEQLVENIYRH
LEENPMF

Specific function: Unknown

COG id: COG4844

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0349 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022916
- InterPro:   IPR009910 [H]

Pfam domain/function: PF07293 DUF1450 [H]

EC number: NA

Molecular weight: Translated: 9960; Mature: 9828

Theoretical pI: Translated: 4.15; Mature: 4.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.5 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
9.1 %Cys+Met (Translated Protein)
4.6 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
8.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGIRKVNTPMILPIIEFCISNLASGSQKAMEILEKDPNLDIIEYSCLSYCTRCADTLFAL
CCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
VNGEFVSGETPEQLVENIYRHLEENPMF
HCCCCCCCCCHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
GIRKVNTPMILPIIEFCISNLASGSQKAMEILEKDPNLDIIEYSCLSYCTRCADTLFAL
CCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
VNGEFVSGETPEQLVENIYRHLEENPMF
HCCCCCCCCCHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA