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The map label for this gene is hesB [H]

Identifier: 138896543

GI number: 138896543

Start: 3013228

End: 3013593

Strand: Reverse

Name: hesB [H]

Synonym: GTNG_2906

Alternate gene names: 138896543

Gene position: 3013593-3013228 (Counterclockwise)

Preceding gene: 138896544

Following gene: 138896541

Centisome position: 84.88

GC content: 56.01

Gene sequence:

>366_bases
ATGACCGAAGCGATCATTACGCTGACGGAAGCGGCAGCGTTTCAAATTAAAGACATGATGAAAGAGCAGGAAGAGGAAAA
CGCCTATTTGCGCGTCGGCGTCCATGGCGGTGGCTGCAGCGGGCTGTCGTACGGCATGGGGTTTGCGCACGAGCGGAACG
ATGATGACATCGAATTGGAACAGCACGGGATTAAAATTTTGATCGACCGCGACAGCGCCCCCATTTTGCGCGGCACGGTC
ATTGACTACAAACAGTCGCTCCTTGGCGGCGGGTTTACGATCAATAACCCGAACGCCATTGCAACATGCGGCTGCGGCTC
GTCATTCCGCACGGCCACAAACGCCGGCACGCCGGAGCAATGTTAA

Upstream 100 bases:

>100_bases
GCCGAAACGGTGTGCACCGGTGTGTATTATTACCGAGGCGGGCAGAACGGTTGAGCATCCGAAAGACAAAACGATATACT
ATAAGTAAGGAGGGATCGGT

Downstream 100 bases:

>100_bases
ACGGTTGACAATATCGAGGCGACAAACCGGTTTCTCACCATTATTGATTTCGTCTGTCGGAAGCAAGCCGATTCACTCAG
TTGGCGAAAGCGGTCTATGG

Product: HesB protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 121; Mature: 120

Protein sequence:

>121_residues
MTEAIITLTEAAAFQIKDMMKEQEEENAYLRVGVHGGGCSGLSYGMGFAHERNDDDIELEQHGIKILIDRDSAPILRGTV
IDYKQSLLGGGFTINNPNAIATCGCGSSFRTATNAGTPEQC

Sequences:

>Translated_121_residues
MTEAIITLTEAAAFQIKDMMKEQEEENAYLRVGVHGGGCSGLSYGMGFAHERNDDDIELEQHGIKILIDRDSAPILRGTV
IDYKQSLLGGGFTINNPNAIATCGCGSSFRTATNAGTPEQC
>Mature_120_residues
TEAIITLTEAAAFQIKDMMKEQEEENAYLRVGVHGGGCSGLSYGMGFAHERNDDDIELEQHGIKILIDRDSAPILRGTVI
DYKQSLLGGGFTINNPNAIATCGCGSSFRTATNAGTPEQC

Specific function: Unknown

COG id: COG0316

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hesB/iscA family [H]

Homologues:

Organism=Homo sapiens, GI52426768, Length=108, Percent_Identity=39.8148148148148, Blast_Score=89, Evalue=6e-19,
Organism=Homo sapiens, GI160420328, Length=91, Percent_Identity=39.5604395604396, Blast_Score=75, Evalue=2e-14,
Organism=Escherichia coli, GI1786351, Length=104, Percent_Identity=41.3461538461538, Blast_Score=95, Evalue=1e-21,
Organism=Escherichia coli, GI1788877, Length=104, Percent_Identity=37.5, Blast_Score=77, Evalue=4e-16,
Organism=Escherichia coli, GI1787974, Length=104, Percent_Identity=34.6153846153846, Blast_Score=70, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI25146411, Length=108, Percent_Identity=39.8148148148148, Blast_Score=86, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI193209025, Length=106, Percent_Identity=39.622641509434, Blast_Score=84, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI71998452, Length=112, Percent_Identity=36.6071428571429, Blast_Score=71, Evalue=1e-13,
Organism=Saccharomyces cerevisiae, GI6323001, Length=106, Percent_Identity=34.9056603773585, Blast_Score=73, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24642263, Length=108, Percent_Identity=41.6666666666667, Blast_Score=92, Evalue=6e-20,
Organism=Drosophila melanogaster, GI24649697, Length=91, Percent_Identity=37.3626373626374, Blast_Score=65, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000361
- InterPro:   IPR016092
- InterPro:   IPR017870 [H]

Pfam domain/function: PF01521 Fe-S_biosyn [H]

EC number: NA

Molecular weight: Translated: 12970; Mature: 12838

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: PS01152 HESB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEAIITLTEAAAFQIKDMMKEQEEENAYLRVGVHGGGCSGLSYGMGFAHERNDDDIELE
CCCEEEEEHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEE
QHGIKILIDRDSAPILRGTVIDYKQSLLGGGFTINNPNAIATCGCGSSFRTATNAGTPEQ
CCCEEEEEECCCCCEEECHHHHHHHHHCCCCEEECCCCEEEEECCCCCCCCCCCCCCCCC
C
C
>Mature Secondary Structure 
TEAIITLTEAAAFQIKDMMKEQEEENAYLRVGVHGGGCSGLSYGMGFAHERNDDDIELE
CCEEEEEHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEE
QHGIKILIDRDSAPILRGTVIDYKQSLLGGGFTINNPNAIATCGCGSSFRTATNAGTPEQ
CCCEEEEEECCCCCEEECHHHHHHHHHCCCCEEECCCCEEEEECCCCCCCCCCCCCCCCC
C
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]