| Definition | Geobacillus thermodenitrificans NG80-2 chromosome, complete genome. |
|---|---|
| Accession | NC_009328 |
| Length | 3,550,319 |
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The map label for this gene is 138896193
Identifier: 138896193
GI number: 138896193
Start: 2656543
End: 2657025
Strand: Reverse
Name: 138896193
Synonym: GTNG_2556
Alternate gene names: NA
Gene position: 2657025-2656543 (Counterclockwise)
Preceding gene: 138896194
Following gene: 138896192
Centisome position: 74.84
GC content: 38.3
Gene sequence:
>483_bases ATGATGTTGAAGCGAATCATCAAAAACGAGCGTGGTTTGACACTCATCGAACTGCTCGCCGTCGTCGTCATTTTAGGGAT TATCTCGGCGATTGCGGTTCCATCGATTGGGGGATTGATTGACAATTCGAAAAAGGATGCGCATGTCGCCAATGCGCAGC AAATGATCAATGCAGCGAAAATTGCAGTGACGGCGGATAAAAGTCTTATACCTGATGGCAGTAAGCCCGTAAAAATTGAA CTGAAGAAACTAGAGAGCAATGGATATCTAGAAAAAGTAAAAGATCCAGATGGAGGAACTTATAATAAAACTGACTCGTA TGTCATGATTAGCAATGATAATAATAAATTGTCTTACAGCGTTAAATTGATTAATGATAAACGGGGCGTTCAGAATGATA ATGGAGAAGCTGTCAATGAAAATAAATTAGATCGTAAACAAGTTAGAAACAATTCATCTCAAAATCCTGAAAATAACTCC TAA
Upstream 100 bases:
>100_bases ATCGTGTCCAACAATAGTCAATAAGAATATATTCTTATTTTTATTTCCTCGTTATAGAATAGTAGGGGCAACATTCTAAT TTAACAGAAAGGGAGAGGGA
Downstream 100 bases:
>100_bases TGAGGACCATGGTCTTAAGCTATTTATTTATTATTTCCCTTCTCCTCGCCTCCTTTTTTAACGTCGTCGGGCTGCGGGTG CCGGTCGGGAAGTCGATCGT
Product: hypothetical protein
Products: NA
Alternate protein names: Tfp Assembly Type Protein; Pilus Assembly Protein PilE
Number of amino acids: Translated: 160; Mature: 160
Protein sequence:
>160_residues MMLKRIIKNERGLTLIELLAVVVILGIISAIAVPSIGGLIDNSKKDAHVANAQQMINAAKIAVTADKSLIPDGSKPVKIE LKKLESNGYLEKVKDPDGGTYNKTDSYVMISNDNNKLSYSVKLINDKRGVQNDNGEAVNENKLDRKQVRNNSSQNPENNS
Sequences:
>Translated_160_residues MMLKRIIKNERGLTLIELLAVVVILGIISAIAVPSIGGLIDNSKKDAHVANAQQMINAAKIAVTADKSLIPDGSKPVKIE LKKLESNGYLEKVKDPDGGTYNKTDSYVMISNDNNKLSYSVKLINDKRGVQNDNGEAVNENKLDRKQVRNNSSQNPENNS >Mature_160_residues MMLKRIIKNERGLTLIELLAVVVILGIISAIAVPSIGGLIDNSKKDAHVANAQQMINAAKIAVTADKSLIPDGSKPVKIE LKKLESNGYLEKVKDPDGGTYNKTDSYVMISNDNNKLSYSVKLINDKRGVQNDNGEAVNENKLDRKQVRNNSSQNPENNS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17473; Mature: 17473
Theoretical pI: Translated: 9.81; Mature: 9.81
Prosite motif: PS00409 PROKAR_NTER_METHYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMLKRIIKNERGLTLIELLAVVVILGIISAIAVPSIGGLIDNSKKDAHVANAQQMINAAK CCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH IAVTADKSLIPDGSKPVKIELKKLESNGYLEKVKDPDGGTYNKTDSYVMISNDNNKLSYS EEEECCCCCCCCCCCCEEEEEEEECCCCCEEECCCCCCCCCCCCCCEEEEECCCCEEEEE VKLINDKRGVQNDNGEAVNENKLDRKQVRNNSSQNPENNS EEEECCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MMLKRIIKNERGLTLIELLAVVVILGIISAIAVPSIGGLIDNSKKDAHVANAQQMINAAK CCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH IAVTADKSLIPDGSKPVKIELKKLESNGYLEKVKDPDGGTYNKTDSYVMISNDNNKLSYS EEEECCCCCCCCCCCCEEEEEEEECCCCCEEECCCCCCCCCCCCCCEEEEECCCCEEEEE VKLINDKRGVQNDNGEAVNENKLDRKQVRNNSSQNPENNS EEEECCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA