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The map label for this gene is yrxA [H]

Identifier: 138896170

GI number: 138896170

Start: 2638752

End: 2639300

Strand: Direct

Name: yrxA [H]

Synonym: GTNG_2533

Alternate gene names: 138896170

Gene position: 2638752-2639300 (Clockwise)

Preceding gene: 138896169

Following gene: 138896199

Centisome position: 74.32

GC content: 47.54

Gene sequence:

>549_bases
ATGGACAAGGTGAAAGAAGAAAAGAAAATTTTAGGAGAAGCGCGGCGCCAGCTCATTTTGCAATGGCTGAAAGAAAGCGA
GACACCGCTCACCGGGGCAGAATTGGCAGCAAAAACGAACGTCAGCCGCCAAGTAATCGTCCAAGATATTTCGCTGTTAA
AGGCACGCAACGAACCTATTATCGCGACAAGCCAAGGATATTTGTATTTAAAGCCGGCCGAACCGACGCAAACGTATACG
CGAACCATCGCCTGCTCCCATACACCGGAACAGACAAAAGAAGAACTGTATTTGCTTGTCGACTGTGGTGTAACGGTAAA
AGATGTCAAAATTGAACATCCGGTCTATGGCGATTTAATTGCATCGGTCATGGTCAGCAACCGCTTCGAAGTCGACCAGT
TTATCGCCAAAATTGAAGCGACAAAATCAGCATATTTATTGCAGCTGACCGATGGGACGCATTTGCATACGCTCGAAGCT
GACTCACCAGAAAAGCTCGACGCCGCCTGCCGTGCCTTAAAACAAGCGGGATTTTTAATCGAGGCCTAA

Upstream 100 bases:

>100_bases
AGCAGTTCGTCCGTGTATCACTTGGTACGTCCACGCGGGAAATAGAGATCGATCAATTGATCTCCACATTAGAACAGTTT
ATCCGAACGCGAAAGGAGGT

Downstream 100 bases:

>100_bases
CCCCTCTTCATTTGCACGCTCCTGTCCCGCCACCAAAACGGGCGTTCCACAGCAGCTAAACAGAACGTGCAGCATTTTTC
ACCTAAGCAAAGCGGGCAAT

Product: putative transcriptional regulator

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MDKVKEEKKILGEARRQLILQWLKESETPLTGAELAAKTNVSRQVIVQDISLLKARNEPIIATSQGYLYLKPAEPTQTYT
RTIACSHTPEQTKEELYLLVDCGVTVKDVKIEHPVYGDLIASVMVSNRFEVDQFIAKIEATKSAYLLQLTDGTHLHTLEA
DSPEKLDAACRALKQAGFLIEA

Sequences:

>Translated_182_residues
MDKVKEEKKILGEARRQLILQWLKESETPLTGAELAAKTNVSRQVIVQDISLLKARNEPIIATSQGYLYLKPAEPTQTYT
RTIACSHTPEQTKEELYLLVDCGVTVKDVKIEHPVYGDLIASVMVSNRFEVDQFIAKIEATKSAYLLQLTDGTHLHTLEA
DSPEKLDAACRALKQAGFLIEA
>Mature_182_residues
MDKVKEEKKILGEARRQLILQWLKESETPLTGAELAAKTNVSRQVIVQDISLLKARNEPIIATSQGYLYLKPAEPTQTYT
RTIACSHTPEQTKEELYLLVDCGVTVKDVKIEHPVYGDLIASVMVSNRFEVDQFIAKIEATKSAYLLQLTDGTHLHTLEA
DSPEKLDAACRALKQAGFLIEA

Specific function: Unknown

COG id: COG1827

COG function: function code R; Predicted small molecule binding protein (contains 3H domain)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004173
- InterPro:   IPR013196
- InterPro:   IPR011991
- ProDom:   PD469575 [H]

Pfam domain/function: PF02829 3H; PF08279 HTH_11 [H]

EC number: NA

Molecular weight: Translated: 20312; Mature: 20312

Theoretical pI: Translated: 5.71; Mature: 5.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKVKEEKKILGEARRQLILQWLKESETPLTGAELAAKTNVSRQVIVQDISLLKARNEPI
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCCE
IATSQGYLYLKPAEPTQTYTRTIACSHTPEQTKEELYLLVDCGVTVKDVKIEHPVYGDLI
EEECCCEEEEECCCCCHHHHEEEEECCCCHHHHHHEEEEEECCCEEEEEEECCCHHHHHH
ASVMVSNRFEVDQFIAKIEATKSAYLLQLTDGTHLHTLEADSPEKLDAACRALKQAGFLI
HHHHHCCCCCHHHHHHHHHHCCCEEEEEECCCCEEEEECCCCCHHHHHHHHHHHHCCCEE
EA
CC
>Mature Secondary Structure
MDKVKEEKKILGEARRQLILQWLKESETPLTGAELAAKTNVSRQVIVQDISLLKARNEPI
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCCE
IATSQGYLYLKPAEPTQTYTRTIACSHTPEQTKEELYLLVDCGVTVKDVKIEHPVYGDLI
EEECCCEEEEECCCCCHHHHEEEEECCCCHHHHHHEEEEEECCCEEEEEEECCCHHHHHH
ASVMVSNRFEVDQFIAKIEATKSAYLLQLTDGTHLHTLEADSPEKLDAACRALKQAGFLI
HHHHHCCCCCHHHHHHHHHHCCCEEEEEECCCCEEEEECCCCCHHHHHHHHHHHHCCCEE
EA
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8444804; 9384377 [H]