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The map label for this gene is spoVB [H]

Identifier: 138896152

GI number: 138896152

Start: 2621444

End: 2623006

Strand: Direct

Name: spoVB [H]

Synonym: GTNG_2515

Alternate gene names: 138896152

Gene position: 2621444-2623006 (Clockwise)

Preceding gene: 138896138

Following gene: 138896153

Centisome position: 73.84

GC content: 53.36

Gene sequence:

>1563_bases
ATGTCTAAATTTTTGCAAGGGACGATCATTTTAATCGCCGCCGGTTTTATTACGAAAATTCTCGGTTTCATCAACCGTAT
CGTCGTCGCCCGGATGATCGGGGATGAAGGGGTCGGGCTGTACATGATGGCCGTACCGACGCTATCGTTAGCCATTACGG
CGACCCAAATCGGGCTTCCTGTCGCCATTTCCAAACTCGTCGCTGAGGCGGAAGCGGCCGGCGACCGGCAGCGGGTGAAA
AAAATTCTTGTCGTGTCGCTTACAACGACGGGAGTGCTGAGCACCGTATTTTTGCCAACGCTCATTGTTATTGCACCATG
GCTTTCACAGACGATGTTCACCGACCCGCGCACATACTACCCGCTAATGGCCATCGCCCCGGTCGTGCCGATCGTGGCGA
TTTCCTCGGTGTTGCGCGGCTATTTTCAAGGGCGCCAACAAATGAAGCCGCACGCCTACTCGCTTTTGATTGAACAAATC
GTCCGTATCAGCTTGATCGCTCTATGCACAAGGCCGCTCTTGCCGTATGGCGTTGAGTACGCCGCCGCCGGCGCCATGGC
ATCTTCTGTCCTTGGTGAACTAGCCGCCTTATTGTATTTGTTGTTCTTATTTAAGTTTAAAAAGTCAATCCGTCTGCGGG
CGAAATTTTTTCGCTACGTGCAAGCCGGTAAAGAGACGTTCATCCGTCTCATGCGGATCGCCTTGCCAACGACCGGCGGC
CGCTTGATCGGCTCACTTTCTTGGTTTTTCGAACCGATCGTCGTCGCCAACAGCTTAGCTCTTGCCGGTGTAGCCTCCTC
CGTCGCCACGAAGCAGTATGGCCAGCTCGTCGGTTACGCGCTGCCGTTGCTCACCTTGCCGTCATTCATTACATACGCGC
TCTCGACAACGCTTGTACCGGCCATTAGTGAGGCAATGGCGCAAAACAAGTTGGTTTTAGTTGAATACCGGATCGCCCAG
GCAATGCGCCTATCGCTTGTCACTGGCGGTCTTTCCGCCGTCGTGCTATACATTTTTGCCGAACCGCTCATGTGGTGGAT
GTACGGCACAAGTGAAGCGGCCATCTTTATTCAAGTGATGGCTCCGTTCTTCTTATTTTATTATTTCCAAGGCCCGCTCC
AAGCCGTATTGCAAGGACTCGACTTGGCGAACGCAGCCATGACGAACAGCTTGATCGGGGCAGTCGTCAAGCTCGCTTGT
ATCTTCACCCTCGCCTCACGTCCTAGTTTAGGCATTATGGGGGCGGCGCTTGCAACATCCATCGGCACGGTGCTTGTGAC
GTTTCTCCATTTCGCCACTGTCGTCAAAGCCGTCTCCTTTTCGATCCATGCGCGCGAGTATGCGAAAGCAACGATTGCCA
TCACTGTCACCGGTGTGGCCGGCTATGTGCTTTTCCACTATCCACCTATAGCCACACCTTCGTCATTATGGACACTGTTC
GCCATGGTGGCGACGATCGTTTTATATATCACTGTCCTTCTGTTCTTTCGGCTCATCAAGCGCGAAGAGCTCGTCTATCT
CCCGGGGCTTCATTGGCTAGCTGGGAAAAACGGACGAAAATAG

Upstream 100 bases:

>100_bases
CCTCCCGCGCCATGCCAGCTATGATCCTTGTCATGCTTGGCCATGTATCTAGCATATATTGTATAAAAGATTAAGGCATT
TGAGAAGGCAGGGAAAGAAG

Downstream 100 bases:

>100_bases
ACTTCTAAACATGTCCGGCAACGAATATATATGGTGGTAAAACGGTTGTGATCAGGGAGGGAACACGGTGTCACGACTTG
GCAGCGCACTCGTATACGGG

Product: stage V sporulation protein B

Products: NA

Alternate protein names: Stage III sporulation protein F [H]

Number of amino acids: Translated: 520; Mature: 519

Protein sequence:

>520_residues
MSKFLQGTIILIAAGFITKILGFINRIVVARMIGDEGVGLYMMAVPTLSLAITATQIGLPVAISKLVAEAEAAGDRQRVK
KILVVSLTTTGVLSTVFLPTLIVIAPWLSQTMFTDPRTYYPLMAIAPVVPIVAISSVLRGYFQGRQQMKPHAYSLLIEQI
VRISLIALCTRPLLPYGVEYAAAGAMASSVLGELAALLYLLFLFKFKKSIRLRAKFFRYVQAGKETFIRLMRIALPTTGG
RLIGSLSWFFEPIVVANSLALAGVASSVATKQYGQLVGYALPLLTLPSFITYALSTTLVPAISEAMAQNKLVLVEYRIAQ
AMRLSLVTGGLSAVVLYIFAEPLMWWMYGTSEAAIFIQVMAPFFLFYYFQGPLQAVLQGLDLANAAMTNSLIGAVVKLAC
IFTLASRPSLGIMGAALATSIGTVLVTFLHFATVVKAVSFSIHAREYAKATIAITVTGVAGYVLFHYPPIATPSSLWTLF
AMVATIVLYITVLLFFRLIKREELVYLPGLHWLAGKNGRK

Sequences:

>Translated_520_residues
MSKFLQGTIILIAAGFITKILGFINRIVVARMIGDEGVGLYMMAVPTLSLAITATQIGLPVAISKLVAEAEAAGDRQRVK
KILVVSLTTTGVLSTVFLPTLIVIAPWLSQTMFTDPRTYYPLMAIAPVVPIVAISSVLRGYFQGRQQMKPHAYSLLIEQI
VRISLIALCTRPLLPYGVEYAAAGAMASSVLGELAALLYLLFLFKFKKSIRLRAKFFRYVQAGKETFIRLMRIALPTTGG
RLIGSLSWFFEPIVVANSLALAGVASSVATKQYGQLVGYALPLLTLPSFITYALSTTLVPAISEAMAQNKLVLVEYRIAQ
AMRLSLVTGGLSAVVLYIFAEPLMWWMYGTSEAAIFIQVMAPFFLFYYFQGPLQAVLQGLDLANAAMTNSLIGAVVKLAC
IFTLASRPSLGIMGAALATSIGTVLVTFLHFATVVKAVSFSIHAREYAKATIAITVTGVAGYVLFHYPPIATPSSLWTLF
AMVATIVLYITVLLFFRLIKREELVYLPGLHWLAGKNGRK
>Mature_519_residues
SKFLQGTIILIAAGFITKILGFINRIVVARMIGDEGVGLYMMAVPTLSLAITATQIGLPVAISKLVAEAEAAGDRQRVKK
ILVVSLTTTGVLSTVFLPTLIVIAPWLSQTMFTDPRTYYPLMAIAPVVPIVAISSVLRGYFQGRQQMKPHAYSLLIEQIV
RISLIALCTRPLLPYGVEYAAAGAMASSVLGELAALLYLLFLFKFKKSIRLRAKFFRYVQAGKETFIRLMRIALPTTGGR
LIGSLSWFFEPIVVANSLALAGVASSVATKQYGQLVGYALPLLTLPSFITYALSTTLVPAISEAMAQNKLVLVEYRIAQA
MRLSLVTGGLSAVVLYIFAEPLMWWMYGTSEAAIFIQVMAPFFLFYYFQGPLQAVLQGLDLANAAMTNSLIGAVVKLACI
FTLASRPSLGIMGAALATSIGTVLVTFLHFATVVKAVSFSIHAREYAKATIAITVTGVAGYVLFHYPPIATPSSLWTLFA
MVATIVLYITVLLFFRLIKREELVYLPGLHWLAGKNGRK

Specific function: Involved, directly or indirectly, in spore cortex biosynthesis. Affects only indirectly the expression of late sporulation genes [H]

COG id: COG2244

COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002528
- InterPro:   IPR002797
- InterPro:   IPR014249 [H]

Pfam domain/function: PF01943 Polysacc_synt [H]

EC number: NA

Molecular weight: Translated: 56509; Mature: 56377

Theoretical pI: Translated: 10.34; Mature: 10.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKFLQGTIILIAAGFITKILGFINRIVVARMIGDEGVGLYMMAVPTLSLAITATQIGLP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHEEHHHHCHH
VAISKLVAEAEAAGDRQRVKKILVVSLTTTGVLSTVFLPTLIVIAPWLSQTMFTDPRTYY
HHHHHHHHHHHHCCCHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
PLMAIAPVVPIVAISSVLRGYFQGRQQMKPHAYSLLIEQIVRISLIALCTRPLLPYGVEY
HHHHHHHHHHHHHHHHHHHHHHHCHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
AAAGAMASSVLGELAALLYLLFLFKFKKSIRLRAKFFRYVQAGKETFIRLMRIALPTTGG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
RLIGSLSWFFEPIVVANSLALAGVASSVATKQYGQLVGYALPLLTLPSFITYALSTTLVP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AISEAMAQNKLVLVEYRIAQAMRLSLVTGGLSAVVLYIFAEPLMWWMYGTSEAAIFIQVM
HHHHHHHCCCEEEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
APFFLFYYFQGPLQAVLQGLDLANAAMTNSLIGAVVKLACIFTLASRPSLGIMGAALATS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
IGTVLVTFLHFATVVKAVSFSIHAREYAKATIAITVTGVAGYVLFHYPPIATPSSLWTLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECHHHHHHEECCCCCCHHHHHHHH
AMVATIVLYITVLLFFRLIKREELVYLPGLHWLAGKNGRK
HHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHCCCCCCC
>Mature Secondary Structure 
SKFLQGTIILIAAGFITKILGFINRIVVARMIGDEGVGLYMMAVPTLSLAITATQIGLP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHEEHHHHCHH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HHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1744050; 9384377 [H]