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The map label for this gene is 138896105

Identifier: 138896105

GI number: 138896105

Start: 2572461

End: 2573249

Strand: Reverse

Name: 138896105

Synonym: GTNG_2468

Alternate gene names: NA

Gene position: 2573249-2572461 (Counterclockwise)

Preceding gene: 138896106

Following gene: 138896101

Centisome position: 72.48

GC content: 45.37

Gene sequence:

>789_bases
ATGGCACTTTCGCAGAAGCTTCCTTACGTATTTAGCGAGGCGACGAAAGTGCTTGACGAACTCATCCAAACATGGCAGTC
GTATTCGAGTTCGATTCCTCAAGAAATCATTGATTCGTTGGAGCGCAGCGTCAATACGGTGCAACAAATGCTGCTGTCGT
TTGCGACGAATCTGACACAGTCGCTTGTTCATTATATTGCCGCCATTCCGGCATTTTTTATTCACTTTTTAGTCTATTTA
GTCGCCCTTTTTCTTATTTGTCTCGATTTGCCACAGTTGAAACAAGGAATCAGACGTTATTTGTCAGAGCGTACTCATCA
ACGGCTTTCAATGGTCGTCAGTCAGTTGAGCAAGGCGGGAGTTGGCTTTATTAAAGCTCAGTTTTTATTCAGTTTAGTTA
CGTTTTTCCTTGCGCTGGCCGGCCTGTTAATATTGGGCGTTGATTATGCTGCTTTAATGGCATTCATCATCGTCGTTGTC
GATATTTTGCCGATTTTAGGAACTGGTTCGGTGCTCGTTCCATGGGGGATTATTAGCATCATCAACGGCAGCACTGCCCT
CGGTATTGGACTGATTGTGCTGTTTGTCATCATTACCGTTGTGCGTCGGATCATCGAACCGAAAGTGTTTTCCACGAATT
TGGGCATTTCACCGCTGGCGGCGCTCGTCAGTGTCTACCTCGGCTTTCAGATACTTGGCTTGCTAGGGGCGTTTATTGGG
CCAGTCATTGTGATTTTAGTGGAGACGCTCGTCAAAGCAGGAGTCATAAAATGGACGATTAAACTATAA

Upstream 100 bases:

>100_bases
GCTGAAACGCGTACATGCTGTGACGGCCATTTTTACGCTATTTTTAGTGATCGTCGGGTTTTCACTTTACTTTTTAATCG
TCATTCTCGTTCAACAGGTG

Downstream 100 bases:

>100_bases
ACAAGCCGGTGAAAAACCGGCTTGTTCTATCAATGAGGAATGCAAAGGCAACCGTTTTTGGTTGCCGTCTTATACATTTT
GGGAAAGGCGCATGGGAACC

Product: hypothetical protein

Products: NA

Alternate protein names: ORF2 [H]

Number of amino acids: Translated: 262; Mature: 261

Protein sequence:

>262_residues
MALSQKLPYVFSEATKVLDELIQTWQSYSSSIPQEIIDSLERSVNTVQQMLLSFATNLTQSLVHYIAAIPAFFIHFLVYL
VALFLICLDLPQLKQGIRRYLSERTHQRLSMVVSQLSKAGVGFIKAQFLFSLVTFFLALAGLLILGVDYAALMAFIIVVV
DILPILGTGSVLVPWGIISIINGSTALGIGLIVLFVIITVVRRIIEPKVFSTNLGISPLAALVSVYLGFQILGLLGAFIG
PVIVILVETLVKAGVIKWTIKL

Sequences:

>Translated_262_residues
MALSQKLPYVFSEATKVLDELIQTWQSYSSSIPQEIIDSLERSVNTVQQMLLSFATNLTQSLVHYIAAIPAFFIHFLVYL
VALFLICLDLPQLKQGIRRYLSERTHQRLSMVVSQLSKAGVGFIKAQFLFSLVTFFLALAGLLILGVDYAALMAFIIVVV
DILPILGTGSVLVPWGIISIINGSTALGIGLIVLFVIITVVRRIIEPKVFSTNLGISPLAALVSVYLGFQILGLLGAFIG
PVIVILVETLVKAGVIKWTIKL
>Mature_261_residues
ALSQKLPYVFSEATKVLDELIQTWQSYSSSIPQEIIDSLERSVNTVQQMLLSFATNLTQSLVHYIAAIPAFFIHFLVYLV
ALFLICLDLPQLKQGIRRYLSERTHQRLSMVVSQLSKAGVGFIKAQFLFSLVTFFLALAGLLILGVDYAALMAFIIVVVD
ILPILGTGSVLVPWGIISIINGSTALGIGLIVLFVIITVVRRIIEPKVFSTNLGISPLAALVSVYLGFQILGLLGAFIGP
VIVILVETLVKAGVIKWTIKL

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014227
- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 28661; Mature: 28530

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHEECC
>Mature Secondary Structure 
ALSQKLPYVFSEATKVLDELIQTWQSYSSSIPQEIIDSLERSVNTVQQMLLSFATNLTQ
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLVHYIAAIPAFFIHFLVYLVALFLICLDLPQLKQGIRRYLSERTHQRLSMVVSQLSKAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
VGFIKAQFLFSLVTFFLALAGLLILGVDYAALMAFIIVVVDILPILGTGSVLVPWGIISI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
INGSTALGIGLIVLFVIITVVRRIIEPKVFSTNLGISPLAALVSVYLGFQILGLLGAFIG
HCCCHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
PVIVILVETLVKAGVIKWTIKL
HHHHHHHHHHHHHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7678007 [H]