Definition | Geobacillus thermodenitrificans NG80-2 chromosome, complete genome. |
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Accession | NC_009328 |
Length | 3,550,319 |
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The map label for this gene is uvrX [H]
Identifier: 138895713
GI number: 138895713
Start: 2199127
End: 2200380
Strand: Direct
Name: uvrX [H]
Synonym: GTNG_2069
Alternate gene names: 138895713
Gene position: 2199127-2200380 (Clockwise)
Preceding gene: 138895711
Following gene: 138895714
Centisome position: 61.94
GC content: 45.69
Gene sequence:
>1254_bases ATGCTGCTTGATATTTCTTGTCTGCCAAAAAATAAAATTTTATGTATCGATATGAAGAGCTTCTACGCTAGTTGCGAATG CGTCGATCATGGACTGAATCCTCTAGAAGATTATGTCGTCGTTGTCTCTGATAAAAATCGAAGTGGGAGTGTAGTTCTAG CTGCGTCTCCGAAAATGAAACAGGATTACGGAATCAGGACAGGGAGCCGTCTATATGAAGTGCCTTGCCGTCGCCATATC CATATTTTTAACGCCCGCATGAAGCGATATTTAGAAATCAGTGTGCAAATCACACAACTGTTTTCTACCTTTGTCCCTTT TGAAGCGATTCTCACATACAGCGTTGATGAGAGCTGGCTAACCCTAGACGGTACGGAAAAACTACATGGATCTCCCGTGG AAGCAGCCCAAAAAATACGAAGTGCGATCTGGAATCAATTCGGTCTGCCATCTTGCATTGGCATCGGCCCGAACCGTTTC ATCAGCAAAGTCGTACTGGATGTATACGCCAAAAAACAAGACATCGCGGAATGTACCTATGAAGAAGTTTCGAAAAAGTT ATGGCCAGTTCCATTGCGGGAAATCTGGGGCATTGGCAGCCGAATGGAGAAACATTTGAACAATATGGGAATGTATACGC TTGGAGACGTAGCAAACAGTTCTTTGGATCGTTTACGAAAGAGATTTGGCGTCATAGGAGAACAGCTTTACTATCATGCT TGGGGCATTGACTTAAGTCCACCTTTTATCGACGCAAGGGCCTTCCCACAAAAAAGTATTGGAAAGGGAATTACGTTGCT GCGCGATTACTGGCGGGAAAACGAAATTTTAACGGTTGTGTTGGAACTTTGTGAAGAAGTGGCAAAACGGGCTCGTGAAA TTGGGAAAGTAGGGCGCACCGTTTCGTTTAGCGTGCGCTATTCGCATAATGAAGGAGGATTCCATCAGTCCGTCACCCTT GATACCGCTACAAACTTAACGATGGATATCTACCGCGTCTGCAAGCAGATTTTCCATAAGTTTTATGACGGGCGAAGCGT GCGCGTTATTCATGTATCCCTAGGAAATTTAATGGACGAGGAAAGTTTGCAGTTGTCCCTTTTTGAAGATAGAACGAAGG AACGCGCTCTTGCCAAAGCAATGGATGCGATTCGCGACAAATTTGGTCCCAACGCGCTGTTGCGCGCAGTCAGCTACACA CCTGGAAGCGTCTCCCGCATCCGCAACGGCTATATAGGAGGGCATCAGGCATGA
Upstream 100 bases:
>100_bases CTCCTTCTTTTCCCAGTTTCCGCTTGACTTTTTTAACAAAATATAAGAACATATATTCGTAAATAGAACATACGTTCTTA TAAAGGAGGTCCTTGTGTCG
Downstream 100 bases:
>100_bases ACCAACGCGATCGAGGAATTATCAAATATTCGCCCTTTTTAATGCCAGAACACCGCAAAATGCTAAAGGAACTTCGTGAA AAAGAAGAGTGAATCCATCC
Product: ImpB/MucB/SamB family DNA-damage repair protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 417; Mature: 417
Protein sequence:
>417_residues MLLDISCLPKNKILCIDMKSFYASCECVDHGLNPLEDYVVVVSDKNRSGSVVLAASPKMKQDYGIRTGSRLYEVPCRRHI HIFNARMKRYLEISVQITQLFSTFVPFEAILTYSVDESWLTLDGTEKLHGSPVEAAQKIRSAIWNQFGLPSCIGIGPNRF ISKVVLDVYAKKQDIAECTYEEVSKKLWPVPLREIWGIGSRMEKHLNNMGMYTLGDVANSSLDRLRKRFGVIGEQLYYHA WGIDLSPPFIDARAFPQKSIGKGITLLRDYWRENEILTVVLELCEEVAKRAREIGKVGRTVSFSVRYSHNEGGFHQSVTL DTATNLTMDIYRVCKQIFHKFYDGRSVRVIHVSLGNLMDEESLQLSLFEDRTKERALAKAMDAIRDKFGPNALLRAVSYT PGSVSRIRNGYIGGHQA
Sequences:
>Translated_417_residues MLLDISCLPKNKILCIDMKSFYASCECVDHGLNPLEDYVVVVSDKNRSGSVVLAASPKMKQDYGIRTGSRLYEVPCRRHI HIFNARMKRYLEISVQITQLFSTFVPFEAILTYSVDESWLTLDGTEKLHGSPVEAAQKIRSAIWNQFGLPSCIGIGPNRF ISKVVLDVYAKKQDIAECTYEEVSKKLWPVPLREIWGIGSRMEKHLNNMGMYTLGDVANSSLDRLRKRFGVIGEQLYYHA WGIDLSPPFIDARAFPQKSIGKGITLLRDYWRENEILTVVLELCEEVAKRAREIGKVGRTVSFSVRYSHNEGGFHQSVTL DTATNLTMDIYRVCKQIFHKFYDGRSVRVIHVSLGNLMDEESLQLSLFEDRTKERALAKAMDAIRDKFGPNALLRAVSYT PGSVSRIRNGYIGGHQA >Mature_417_residues MLLDISCLPKNKILCIDMKSFYASCECVDHGLNPLEDYVVVVSDKNRSGSVVLAASPKMKQDYGIRTGSRLYEVPCRRHI HIFNARMKRYLEISVQITQLFSTFVPFEAILTYSVDESWLTLDGTEKLHGSPVEAAQKIRSAIWNQFGLPSCIGIGPNRF ISKVVLDVYAKKQDIAECTYEEVSKKLWPVPLREIWGIGSRMEKHLNNMGMYTLGDVANSSLDRLRKRFGVIGEQLYYHA WGIDLSPPFIDARAFPQKSIGKGITLLRDYWRENEILTVVLELCEEVAKRAREIGKVGRTVSFSVRYSHNEGGFHQSVTL DTATNLTMDIYRVCKQIFHKFYDGRSVRVIHVSLGNLMDEESLQLSLFEDRTKERALAKAMDAIRDKFGPNALLRAVSYT PGSVSRIRNGYIGGHQA
Specific function: Poorly Processive, Error-Prone DNA Polymerase Involved In Untargeted Mutagenesis. Copies Undamaged DNA At Stalled Replication Forks, Which Arise In Vivo From Mismatched Or Misaligned Primer Ends. These Misaligned Primers Can Be Extended By Poliv. Exhibits
COG id: COG0389
COG function: function code L; Nucleotidyltransferase/DNA polymerase involved in DNA repair
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 umuC domain [H]
Homologues:
Organism=Escherichia coli, GI1786425, Length=365, Percent_Identity=28.2191780821918, Blast_Score=111, Evalue=1e-25, Organism=Escherichia coli, GI1787432, Length=408, Percent_Identity=25, Blast_Score=79, Evalue=5e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017962 - InterPro: IPR017961 - InterPro: IPR001126 - InterPro: IPR017963 [H]
Pfam domain/function: PF00817 IMS [H]
EC number: 2.7.7.7 [C]
Molecular weight: Translated: 47302; Mature: 47302
Theoretical pI: Translated: 8.85; Mature: 8.85
Prosite motif: PS50173 UMUC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLDISCLPKNKILCIDMKSFYASCECVDHGLNPLEDYVVVVSDKNRSGSVVLAASPKMK CEEEEEECCCCCEEEEEHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCEEEEECCCCH QDYGIRTGSRLYEVPCRRHIHIFNARMKRYLEISVQITQLFSTFVPFEAILTYSVDESWL HHCCCCCCCHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHEEECCCCEE TLDGTEKLHGSPVEAAQKIRSAIWNQFGLPSCIGIGPNRFISKVVLDVYAKKQDIAECTY EECCCCCCCCCHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHH EEVSKKLWPVPLREIWGIGSRMEKHLNNMGMYTLGDVANSSLDRLRKRFGVIGEQLYYHA HHHHHHCCCCCHHHHHCCHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHEE WGIDLSPPFIDARAFPQKSIGKGITLLRDYWRENEILTVVLELCEEVAKRAREIGKVGRT ECCCCCCCCCCCCCCCCHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCE VSFSVRYSHNEGGFHQSVTLDTATNLTMDIYRVCKQIFHKFYDGRSVRVIHVSLGNLMDE EEEEEEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCC ESLQLSLFEDRTKERALAKAMDAIRDKFGPNALLRAVSYTPGSVSRIRNGYIGGHQA CCCEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHCCCCCCCCC >Mature Secondary Structure MLLDISCLPKNKILCIDMKSFYASCECVDHGLNPLEDYVVVVSDKNRSGSVVLAASPKMK CEEEEEECCCCCEEEEEHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCEEEEECCCCH QDYGIRTGSRLYEVPCRRHIHIFNARMKRYLEISVQITQLFSTFVPFEAILTYSVDESWL HHCCCCCCCHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHEEECCCCEE TLDGTEKLHGSPVEAAQKIRSAIWNQFGLPSCIGIGPNRFISKVVLDVYAKKQDIAECTY EECCCCCCCCCHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHH EEVSKKLWPVPLREIWGIGSRMEKHLNNMGMYTLGDVANSSLDRLRKRFGVIGEQLYYHA HHHHHHCCCCCHHHHHCCHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHEE WGIDLSPPFIDARAFPQKSIGKGITLLRDYWRENEILTVVLELCEEVAKRAREIGKVGRT ECCCCCCCCCCCCCCCCHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCE VSFSVRYSHNEGGFHQSVTLDTATNLTMDIYRVCKQIFHKFYDGRSVRVIHVSLGNLMDE EEEEEEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCC ESLQLSLFEDRTKERALAKAMDAIRDKFGPNALLRAVSYTPGSVSRIRNGYIGGHQA CCCEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9722542; 9384377 [H]