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The map label for this gene is sapC [H]

Identifier: 138895687

GI number: 138895687

Start: 2161996

End: 2162892

Strand: Direct

Name: sapC [H]

Synonym: GTNG_2043

Alternate gene names: 138895687

Gene position: 2161996-2162892 (Clockwise)

Preceding gene: 138895686

Following gene: 138895689

Centisome position: 60.9

GC content: 37.57

Gene sequence:

>897_bases
ATGCTGGGGTTCCTTTTTATCAGCATATTGCTCTTATTAAGTTTGTTAAACAGCATAATTAATGATGGGAGCATTCGACA
AGTTCCAATTCTTTTTGATAAAAATGGTAATGTTATCGGCACTCCTCCTTTTGCACCTTCTCTTCGTTTTCCGTTAGGGA
CCGATCGCAATGGATACGACATGCTTCATATGATGATTCAAGGCGCAAAATTTACTATAGGAATCGCTTTGCTTATCATG
ATGTTGCGCATGGCTTTGGCCATTATGATCGGGGGAACGTTAGGAGTATACTGCAAAAAATGGATTCCAAAACTAGAAAA
CTTTTTTGATAGTTTTACTGTCGTTCCGTTAACGTTAATCGCTTACTTTATTTTAGTCAATGTGCTATGGATGCCGAGCG
ACGGGTTTCCGCATCCTTTTTGGAAACGGGCCGTATTTGAAGTATTTGTTCTCACTGTTCTTGCTCTTCCAACGTTGTCA
TTTTATATTGCCAATGACATTCGGAGAGTGTATAGGGAAGAGTTTGTCCAAGCAGCTAAAATATTAGGCGGTTCCAAATG
GCATATTTTCAAAGTGCATGTGCTTCCACATGTTTTGGAAAATTGGGTTCTGTTGTCTATTCAGCAATTCATTCAAGTAT
TAATGGTGTTAGCTCACCTAGGAGTGCTACAATTGTTTTTTGGAGGCACTTATGTCGACTATATGCAGATAGACCCTCCG
AAAACGACTTCCTATGAATGGTCAGGACTTATTGGTGACAGCTATCAAGTAATAAGCATCACCCCTTGGATCCCACTTAT
ACCAATTGTATTTTTTTCTTTAACAATTATATCATCTCAATTTATACTAAATGGTTTAAAAAGAGCATTCATATTGAAAA
GAAGGGTAAAAAATTAA

Upstream 100 bases:

>100_bases
CCTGTCTTTTTATTTTATAAAATCTCTTATTTATTTCTTCCACAGATGTGGAAAGGAGAGAAGTAGCTTGATTCGTATAT
TGATCCAGGACAAGTTATTT

Downstream 100 bases:

>100_bases
AAATAAATAATGAAGGTGAAAAATTCATAAGCTTGATTGTTGAATCTCTACGTTCGATTGGTAGTAGTACATAAGTGGTT
TCTCCTATCAGTTGTTTTCT

Product: oligopeptide transport system permease-like protein

Products: ADP; phosphate; peptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 298; Mature: 298

Protein sequence:

>298_residues
MLGFLFISILLLLSLLNSIINDGSIRQVPILFDKNGNVIGTPPFAPSLRFPLGTDRNGYDMLHMMIQGAKFTIGIALLIM
MLRMALAIMIGGTLGVYCKKWIPKLENFFDSFTVVPLTLIAYFILVNVLWMPSDGFPHPFWKRAVFEVFVLTVLALPTLS
FYIANDIRRVYREEFVQAAKILGGSKWHIFKVHVLPHVLENWVLLSIQQFIQVLMVLAHLGVLQLFFGGTYVDYMQIDPP
KTTSYEWSGLIGDSYQVISITPWIPLIPIVFFSLTIISSQFILNGLKRAFILKRRVKN

Sequences:

>Translated_298_residues
MLGFLFISILLLLSLLNSIINDGSIRQVPILFDKNGNVIGTPPFAPSLRFPLGTDRNGYDMLHMMIQGAKFTIGIALLIM
MLRMALAIMIGGTLGVYCKKWIPKLENFFDSFTVVPLTLIAYFILVNVLWMPSDGFPHPFWKRAVFEVFVLTVLALPTLS
FYIANDIRRVYREEFVQAAKILGGSKWHIFKVHVLPHVLENWVLLSIQQFIQVLMVLAHLGVLQLFFGGTYVDYMQIDPP
KTTSYEWSGLIGDSYQVISITPWIPLIPIVFFSLTIISSQFILNGLKRAFILKRRVKN
>Mature_298_residues
MLGFLFISILLLLSLLNSIINDGSIRQVPILFDKNGNVIGTPPFAPSLRFPLGTDRNGYDMLHMMIQGAKFTIGIALLIM
MLRMALAIMIGGTLGVYCKKWIPKLENFFDSFTVVPLTLIAYFILVNVLWMPSDGFPHPFWKRAVFEVFVLTVLALPTLS
FYIANDIRRVYREEFVQAAKILGGSKWHIFKVHVLPHVLENWVLLSIQQFIQVLMVLAHLGVLQLFFGGTYVDYMQIDPP
KTTSYEWSGLIGDSYQVISITPWIPLIPIVFFSLTIISSQFILNGLKRAFILKRRVKN

Specific function: Involved in a peptide intake transport system that plays a role in the resistance to antimicrobial peptides [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787549, Length=245, Percent_Identity=23.265306122449, Blast_Score=70, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33915; Mature: 33915

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGFLFISILLLLSLLNSIINDGSIRQVPILFDKNGNVIGTPPFAPSLRFPLGTDRNGYD
CHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCEEECCCCCCCCCCCCCCCCCHHH
MLHMMIQGAKFTIGIALLIMMLRMALAIMIGGTLGVYCKKWIPKLENFFDSFTVVPLTLI
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AYFILVNVLWMPSDGFPHPFWKRAVFEVFVLTVLALPTLSFYIANDIRRVYREEFVQAAK
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILGGSKWHIFKVHVLPHVLENWVLLSIQQFIQVLMVLAHLGVLQLFFGGTYVDYMQIDPP
HHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCC
KTTSYEWSGLIGDSYQVISITPWIPLIPIVFFSLTIISSQFILNGLKRAFILKRRVKN
CCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLGFLFISILLLLSLLNSIINDGSIRQVPILFDKNGNVIGTPPFAPSLRFPLGTDRNGYD
CHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCEEECCCCCCCCCCCCCCCCCHHH
MLHMMIQGAKFTIGIALLIMMLRMALAIMIGGTLGVYCKKWIPKLENFFDSFTVVPLTLI
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AYFILVNVLWMPSDGFPHPFWKRAVFEVFVLTVLALPTLSFYIANDIRRVYREEFVQAAK
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILGGSKWHIFKVHVLPHVLENWVLLSIQQFIQVLMVLAHLGVLQLFFGGTYVDYMQIDPP
HHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCC
KTTSYEWSGLIGDSYQVISITPWIPLIPIVFFSLTIISSQFILNGLKRAFILKRRVKN
CCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; peptides [Periplasm]; H2O [C]

Specific reaction: ATP + peptides [Periplasm] + H2O = ADP + phosphate + peptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]