Click here to switch to the map view.

The map label for this gene is yliC [C]

Identifier: 138895686

GI number: 138895686

Start: 2161116

End: 2161961

Strand: Direct

Name: yliC [C]

Synonym: GTNG_2042

Alternate gene names: 138895686

Gene position: 2161116-2161961 (Clockwise)

Preceding gene: 138895685

Following gene: 138895687

Centisome position: 60.87

GC content: 37.0

Gene sequence:

>846_bases
ATGAAATTCATTGCTGGAATAATACTAGAATGCTTATTGGCAATCCTAGGAGTAGTGATGGTCAGTGGTTTTCCCAGCTT
ATTTCATAATATTTCGATCAATGTAAAGGAATATGTAAAAACATTAGGATACATCATCATGAAGCTTATTCATCCACTAA
GTATCGAATATGGAACGAATAGAAAAGTATTCCCACAAATTCTTATTCATTATCGGGAGTCGCTTCTATTATGCGGGTTG
GCAATCGTGGTAGCACTAATATTAGCATGGGGAATAACGTATATCACGCTTCTTTTCTTCCGGAGCCATATGGAGCGAAT
CAAAATGATATTGGGTCTTTTTGAATCCTTGCCCGCTCTGCTGATTATCGTGACCTTTCAGTTAATCGTAATTGTAATAT
TCAAAAAAACCGGCTGGCTCATCTTTCAGCTTGCTTCCGCAGGAGAGGAAAGAAGCCTTTTTTTGCCCACCACTTGTCTG
AGTATTCCGATTTCTCTGTTGTTTGCAAAGTTTCTTTTGCAGCAATATGAAAACGAACTTCATAAGCCATATGTAGAATA
CGCTTTTTCAAAAGGGCTGTCTTTTTTCTATATTTTGAATCAACATGTGCTGCGGAACGTAGCGCCGGGATTGATTTATT
ATTCGAAAACAATGATTTGGTTTATGCTTTCGAACTTGATTATCATCGAGTATGTCTTTAACGTGAGCGGCATTACTGCT
TTTTTGCTTGAATATCATACTCCGGAAGTGTTTGCGCTCGGGTTGTTATTATTATATATCCCTGTCTTTTTATTTTATAA
AATCTCTTATTTATTTCTTCCACAGATGTGGAAAGGAGAGAAGTAG

Upstream 100 bases:

>100_bases
TGGTATGGATTTCATCGATATGTACTGCATGTGTTATGTTGCATCCTTATGCATAACTTCGAGTTTTTACTCTAGTTTTG
CAACACCATCGATAAGAATA

Downstream 100 bases:

>100_bases
CTTGATTCGTATATTGATCCAGGACAAGTTATTTATGCTGGGGTTCCTTTTTATCAGCATATTGCTCTTATTAAGTTTGT
TAAACAGCATAATTAATGAT

Product: oligopeptide transport system permease-like protein

Products: NA

Alternate protein names: ABC Transporter Permease Protein; Oligopeptide Transport System Permease Protein-Like Protein

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MKFIAGIILECLLAILGVVMVSGFPSLFHNISINVKEYVKTLGYIIMKLIHPLSIEYGTNRKVFPQILIHYRESLLLCGL
AIVVALILAWGITYITLLFFRSHMERIKMILGLFESLPALLIIVTFQLIVIVIFKKTGWLIFQLASAGEERSLFLPTTCL
SIPISLLFAKFLLQQYENELHKPYVEYAFSKGLSFFYILNQHVLRNVAPGLIYYSKTMIWFMLSNLIIIEYVFNVSGITA
FLLEYHTPEVFALGLLLLYIPVFLFYKISYLFLPQMWKGEK

Sequences:

>Translated_281_residues
MKFIAGIILECLLAILGVVMVSGFPSLFHNISINVKEYVKTLGYIIMKLIHPLSIEYGTNRKVFPQILIHYRESLLLCGL
AIVVALILAWGITYITLLFFRSHMERIKMILGLFESLPALLIIVTFQLIVIVIFKKTGWLIFQLASAGEERSLFLPTTCL
SIPISLLFAKFLLQQYENELHKPYVEYAFSKGLSFFYILNQHVLRNVAPGLIYYSKTMIWFMLSNLIIIEYVFNVSGITA
FLLEYHTPEVFALGLLLLYIPVFLFYKISYLFLPQMWKGEK
>Mature_281_residues
MKFIAGIILECLLAILGVVMVSGFPSLFHNISINVKEYVKTLGYIIMKLIHPLSIEYGTNRKVFPQILIHYRESLLLCGL
AIVVALILAWGITYITLLFFRSHMERIKMILGLFESLPALLIIVTFQLIVIVIFKKTGWLIFQLASAGEERSLFLPTTCL
SIPISLLFAKFLLQQYENELHKPYVEYAFSKGLSFFYILNQHVLRNVAPGLIYYSKTMIWFMLSNLIIIEYVFNVSGITA
FLLEYHTPEVFALGLLLLYIPVFLFYKISYLFLPQMWKGEK

Specific function: Probably Part Of The Binding-Protein-Dependent Transport System Yliabcd; Probably Responsible For The Translocation Of The Substrate Across The Membrane. [C]

COG id: COG0601

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32415; Mature: 32415

Theoretical pI: Translated: 9.29; Mature: 9.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFIAGIILECLLAILGVVMVSGFPSLFHNISINVKEYVKTLGYIIMKLIHPLSIEYGTN
CHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
RKVFPQILIHYRESLLLCGLAIVVALILAWGITYITLLFFRSHMERIKMILGLFESLPAL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIIVTFQLIVIVIFKKTGWLIFQLASAGEERSLFLPTTCLSIPISLLFAKFLLQQYENEL
HHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHH
HKPYVEYAFSKGLSFFYILNQHVLRNVAPGLIYYSKTMIWFMLSNLIIIEYVFNVSGITA
HHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLLEYHTPEVFALGLLLLYIPVFLFYKISYLFLPQMWKGEK
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKFIAGIILECLLAILGVVMVSGFPSLFHNISINVKEYVKTLGYIIMKLIHPLSIEYGTN
CHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
RKVFPQILIHYRESLLLCGLAIVVALILAWGITYITLLFFRSHMERIKMILGLFESLPAL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIIVTFQLIVIVIFKKTGWLIFQLASAGEERSLFLPTTCLSIPISLLFAKFLLQQYENEL
HHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHH
HKPYVEYAFSKGLSFFYILNQHVLRNVAPGLIYYSKTMIWFMLSNLIIIEYVFNVSGITA
HHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLLEYHTPEVFALGLLLLYIPVFLFYKISYLFLPQMWKGEK
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA